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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000517_pilon:50534..53350- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042976 ID=XLOC_042976|Name=XLOC_042976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2817bp|location=Sequence derived from alignment at sc0000517_pilon:50534..53350- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGTTCAATACGCACCACAAAAATTGACAGTACCCGATGGTTTCAA
TAATCTTCTTGAAGGTTTGGCACGAGAAGTTCTAAGAGAACAACCAGAAA
ACATCATCAAATTTGCAGCTGATTATTTCAAACAACAGGTTGCTACTAGA
GTCGGTAAGTTTTTTTTAATGTTTTTATAAGATTTCTAAATTTTAGAAAT
TTTATATAAAGAATCAGTGTAACTCCAATGGGTCCTTTTGTTAATTTTCG
AATCATTTTAGTCACTTTTTTGTCCTCAAAGGGGCAGATACATAAATTTG
CTACTATCAAGCTAAGGAGAGCCAGAAACCGTTTCAATTCGAAGGATTTA
GGCTAATATCACCTTTGATATCCAGGCTTTAAGCTCTCTTTTGTATTTTA
GTGTTTCCAGGCTAGAGTTATAGAGGTTCGAGTTATGAAAAGTCGACGAG
AAGTTGACTTTATCAACCATAACTTCATTGTCCGAAAATACACATCTTCG
AATAAGATGATTTCACGTTTTTTTATAAGAACATACAAAATTTTTGAAGC
CTTCGGATGTTCTTAACTTTATGAGTTTTAACAGGTTTTAAGCCTAAAAA
TGTTCTGGACATATTCTTATTTTCGCCATTTTTTGAGTTTTTTTTGCCTA
TTTTCTTAAGAAATCGGGTGTTTTAGAGTCCGCGAAGCCTTGAAATGTTC
TTAGCATGTTCTTAACATTTTTGCCATCGAAGCCTTATGTTCTGATATAG
TTTGTTCTTATAAAAGAAATGTGTACACATCTTCGAATAAGATGATTATT
AAAAAATGTAAAAGATCTGGCTTGTTAAAAAACCTGTTAATTTTTGATTA
ATTAGAATGTAATAAGTAAGGTTTGAATACGAGACTGTTCTTGTCTGCAT
CCTTTCATTATTACTTAGCAAATTATTTTGTTTCAAAAGATGATTGTGAC
ATTATTTTATAAATTCGCACCTACACAAAACCAAGCCGAAATCCTCATCT
CACAAATATTTCATAGGAATATCCAAAGAAACTTTACCTTTCCAAAGAAC
TGTCTCTCGTAATCTACGGAAAAGCTTTTTTCTGAGACCTACATTAAAGT
TTTTGAAATTTCTAGATAGGTCTAGTTAACTTTACATTCATCAATATGGT
TGGTCTTACAGCTAACGGTGGTGAACCACTTCCACCACGACCACAAGTAA
AATCTCAACCTATGAGCGATCAAAAGGAAGAGGCAGCGCCATCTCCACCG
CCCTCAGCTAAAGAACCCACCCCACCACCGCCACAAGATATCGCCACAGA
AGAAGTTCAATCAACGGATGTTGACGAGGACAAAGAACAAGACTCTCCTA
GGTACTTAAGATCTACTCATATTCACGGTGTTCCGTTTTCTTCCAAAACT
ATATATAGACTTTTTTCTTATTGATTGCATCAAGTAACTAATTAAATAAA
TCGATAGCTATATCTATCCGGAGGTAGGGGAGGGCGCCACTCTTTCTCCC
TAGATTGCTCCACTTACCCTTGGCCCTTCTCTTAATTGCTGAGCATCAAG
CAGAGAGGCATCAAGTACCATTTTGGTAATCTTTGGTATGACCCGATTGG
GGGGCGAACCCACAACCTTGCGCACCGTAGCCGGATGCTCTACCACTACA
CTACAGACGCTAAAATCAGGAACTAGCATATTTACTTTTGGCTTTTTCAA
GAAGAAAATGTCGAACAAAAATAATAATTGATTTAAGTCAATTTGCTCAA
TTTTTATTTTATTTCGAGTCCATTTTTCAATTCACATTAAATGCTTCGAG
CTTGGATTGGATTAAAACGACATGGTGCTTTAAATTTAGAAGTCCATTGT
TAATTAAACACTAAGAATATCCCCAAACATCCCCTAGTAGGAAAATCTAA
GATACAATGAATTTGGCTTAAAAGATACTTTAAGTGGATTAATTTTAGAA
AGACAATTTTTTTCTAAAAAAATAATTTAATTTTTGCGGGACTTGTTTTC
GCGAGCAACAATTTCGAGAGAGAAATTTTTCGTGAGCATCACATTTCGTA
AATCAACCTCATTTTAACCTAATTTCTTTCATTTTCCAAGGGATTTAGGC
AAAAATCATCATTTTAAATTACGCAAGGATTAAAGTTCGCGAAACCAGAA
AAATTTTTTTACGAGCATTAGATTTCGCGAATTTTTGGAAAAACTCCCGA
AATATAATCCTCGCTTGAATTAATCCACTTACTAAGGTACCCAGCCTCTC
ATAACCCCGGTGTGGTTGAAAGGTTTCTTTTCTAAATCCATTTCATGTTC
TTAATCAAGGTTGACTGAAGAACAAGCGGCAACAAAAATCCAAGCTATGG
TTCGTGGAAAGAAAGCACGTGGTGACGTTGAAGCTTTAAAAGCATCAAAA
TCACAGACCGACGAGGAAACACCACAAGCTTCAGCTACCGAAAACGAAAG
TGAAAAAGAACGAAGTAATACCGATACCGAGGCGGAGGACCAAGTACAGA
GCGACGCGACAGCGCCAGAAAGTGAACCTGCTGCAAATGAATCACAAACA
GAAGAATCAGAAGTAAAAGACGGCGCTGAAGTCGAAGAAGCTACGGAAGA
GGAATTAACAGGAGCCGCTCTAAAGATTCAAGCTACGTTCCGTGGTTCTA
AAGCGAGGAAAGCAGTTGCTGCTCAGAAGGAATCTTTGAACAATGTGAAA
ACAACTGAAGAAGGCGATGAAGATAAAAATGAAGAGGTTGTTAATGAGGA
TAAAAAAGAAGAGGTGGTTGATGAGGAAGCGAAACCAGCCCCTCCTGAAG
AAGAGGGTGGTAATTAA Coding sequence (CDS) from alignment at sc0000517_pilon:50534..53350- >XLOC_042976 ID=XLOC_042976|Name=XLOC_042976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1704bp|location=Sequence derived from alignment at sc0000517_pilon:50534..53350- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTGTTCAATACGCACCACAAAAATTGACAGTACCCGATGGTTTCAA
TAATCTTCTTGAAGGTTTGGCACGAGAAGTTCTAAGAGAACAACCAGAAA
ACATCATCAAATTTGCAGCTGATTATTTCAAACAACAGGTTGCTACTAGA
GTCGATGGCTGTTCAATACGCACCACAAAAATTGACAGTACCCGATGGTT
TCAATAATCTTCTTGAAGGTTTGGCACGAGAAGTTCTAAGAGAACAACCA
GAAAACATCATCAAATTTGCAGCTGATTATTTCAAACAACAGGTTGCTAC
TAGAGTCGCTAACGGTGGTGAACCACTTCCACCACGACCACAAGTAAAAT
CTCAACCTATGAGCGATCAAAAGGAAGAGGCAGCGCCATCTCCACCGCCC
TCAGCTAAAGAACCCACCCCACCACCGCCACAAGATATCGCCACAGAAGA
AGTTCAATCAACGGATGTTGACGAGGACAAAGAACAAGACTCTCCTAGCT
AACGGTGGTGAACCACTTCCACCACGACCACAAGTAAAATCTCAACCTAT
GAGCGATCAAAAGGAAGAGGCAGCGCCATCTCCACCGCCCTCAGCTAAAG
AACCCACCCCACCACCGCCACAAGATATCGCCACAGAAGAAGTTCAATCA
ACGGATGTTGACGAGGACAAAGAACAAGACTCTCCTAGGTTGACTGAAGA
ACAAGCGGCAACAAAAATCCAAGCTATGGTTCGTGGAAAGAAAGCACGTG
GTGACGTTGAAGCTTTAAAAGCATCAAAATCACAGACCGACGAGGAAACA
CCACAAGCTTCAGCTACCGAAAACGAAAGTGAAAAAGAACGAAGTAATAC
CGATACCGAGGCGGAGGACCAAGTACAGAGCGACGCGACAGCGCCAGAAA
GTGAACCTGCTGCAAATGAATCACAAACAGAAGAATCAGAAGTAAAAGAC
GGCGCTGAAGTCGAAGAAGCTACGGAAGAGGAATTAACAGGAGCCGCTCT
AAAGATTCAAGCTACGTTCCGTGGTTCTAAAGCGAGGAAAGCAGTTGCTG
CTCAGAAGGAATCTTTGAACAATGTGAAAACAACTGAAGAAGGCGATGAA
GATAAAAATGAAGAGGTTGTTAATGAGGATAAAAAAGAAGAGGTGGTTGA
TGAGGAAGCGAAACCAGCCCCTCCTGAAGAAGAGGGTGGTAATTAAGTTG
ACTGAAGAACAAGCGGCAACAAAAATCCAAGCTATGGTTCGTGGAAAGAA
AGCACGTGGTGACGTTGAAGCTTTAAAAGCATCAAAATCACAGACCGACG
AGGAAACACCACAAGCTTCAGCTACCGAAAACGAAAGTGAAAAAGAACGA
AGTAATACCGATACCGAGGCGGAGGACCAAGTACAGAGCGACGCGACAGC
GCCAGAAAGTGAACCTGCTGCAAATGAATCACAAACAGAAGAATCAGAAG
TAAAAGACGGCGCTGAAGTCGAAGAAGCTACGGAAGAGGAATTAACAGGA
GCCGCTCTAAAGATTCAAGCTACGTTCCGTGGTTCTAAAGCGAGGAAAGC
AGTTGCTGCTCAGAAGGAATCTTTGAACAATGTGAAAACAACTGAAGAAG
GCGATGAAGATAAAAATGAAGAGGTTGTTAATGAGGATAAAAAAGAAGAG
GTGGTTGATGAGGAAGCGAAACCAGCCCCTCCTGAAGAAGAGGGTGGTAA
TTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000517_pilon | genome | sc0000517_pilon:50534..53350 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 346-852:508 |
| Aaloc | 157-342:1655 |
| Aaloc | 1-153:2818 |
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