XLOC_042931 (mRNA) -

Overview
NameXLOC_042931
Unique NameXLOC_042931
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000113_pilon:856057..857053-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042931 ID=XLOC_042931|Name=XLOC_042931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=997bp|location=Sequence derived from alignment at sc0000113_pilon:856057..857053- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGACTTCCAATCAAAGAATTCGCTTGGTGTGGTGGCTGTTTTGTCT TTCAATCATTTCAAGGTATTATTTTTCTATCAAGTTTTTACCTATTTGAT TGAATGATCTGAATTTGCTTGGATAGTTTTCTGGATGGACTTTCAAGAAT TACCGCTTTGAATTACAACCCCTTTTTTTAATCTCACTTTAGCATTTGTG GAAGCAAAACTACCGAATCAAAAGTTAATCGTTCAAAAAGAAATTTAGGA GGAATTCTTCAAAATACAGAGCTTCCACGTGGAAAAAAAGGCGAAATATT CGAGGCTACATTGGGAAAGCTAACACCAATTCTATCTTCATACCATCTTG ATAAAGCTGCCGAAGACGCTTTTCCAAAAAATCTCGAGGAGTTGAGTAAA ACAAGTAAAACCTACCATTCAATCCCAGAGGTTGCGCTAAGAGGAACGAA GGGTACTGCTGCTATCTATGATATTGTAATGAAAAATCTTATTGCACAAC AAAAGGACATCCCAAATTTACATGACGGGGCTGGTTTGACTTTATATCGT GGTGATGACCGTAATGCAGATCAAATAATTCAGGCTAACGGCTTTTTCGG CTTTGCTCCTATCACAGTCGAGCATGCAAGACTAATCGCACCATATTGGC AAAACATGGCGATGGCAGAAAAATGGCGAGTACAAACAGGAATTCATGGC CCTATGCCTTTCGTAGCAACAACACCAGAAAAAAGTCCCCCTAAAGGTAA ATACCAATACGAAATAACGGTACCCATTCCAAAAGAGAGGGCCGAAGGAT TGGGCGTGCTTCTTCTTCACGAAGGAACAAATGAAAAAGATTTTTCCAAA TCCAATATCATTGCTCTTCGTATGAATGGCCATGAAACTGACTTTGTCAC TGGTATTCCCTTAAAATGGATCGTTGGATGCAGAAAAGAAGAAAAAGAGG AAAAAGAGTATCTACCTTTAACGGATCCTAAATCTTCTTGTCGTTAA

Coding sequence (CDS) from alignment at sc0000113_pilon:856057..857053-

>XLOC_042931 ID=XLOC_042931|Name=XLOC_042931|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1740bp|location=Sequence derived from alignment at sc0000113_pilon:856057..857053- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGACTTCCAATCAAAGAATTCGCTTGGTGTGGTGGCTGTTTTGTCT
TTCAATCATTTCAAGATGATGACTTCCAATCAAAGAATTCGCTTGGTGTG
GTGGCTGTTTTGTCTTTCAATCATTTCAAGCATTTGTGGAAGCAAAACTA
CCGAATCAAAAGTTAATCGTTCAAAAAGAAATTTAGGAGGAATTCTTCAA
AATACAGAGCTTCCACGTGGAAAAAAAGGCGAAATATTCGAGGCTACATT
GGGAAAGCTAACACCAATTCTATCTTCATACCATCTTGATAAAGCTGCCG
AAGACGCTTTTCCAAAAAATCTCGAGGAGTTGAGTAAAACAAGTAAAACC
TACCATTCAATCCCAGAGGTTGCGCTAAGAGGAACGAAGGGTACTGCTGC
TATCTATGATATTGTAATGAAAAATCTTATTGCACAACAAAAGGACATCC
CAAATTTACATGACGGGGCTGGTTTGACTTTATATCGTGGTGATGACCGT
AATGCAGATCAAATAATTCAGGCTAACGGCTTTTTCGGCTTTGCTCCTAT
CACAGTCGAGCATGCAAGACTAATCGCACCATATTGGCAAAACATGGCGA
TGGCAGAAAAATGGCGAGTACAAACAGGAATTCATGGCCCTATGCCTTTC
GTAGCAACAACACCAGAAAAAAGTCCCCCTAAAGGTAAATACCAATACGA
AATAACGGTACCCATTCCAAAAGAGAGGGCCGAAGGATTGGGCGTGCTTC
TTCTTCACGAAGGAACAAATGAAAAAGATTTTTCCAAATCCAATATCATT
GCTCTTCGTATGAATGGCCATGAAACTGACTTTGTCACTGGTATTCCCTT
AAAATGGATCGTTGGATGCAGAAAAGAAGAAAAAGAGGAAAAAGAGTATC
TACCTTTAACGGATCCTAAATCTTCTTGTCGTTAACATTTGTGGAAGCAA
AACTACCGAATCAAAAGTTAATCGTTCAAAAAGAAATTTAGGAGGAATTC
TTCAAAATACAGAGCTTCCACGTGGAAAAAAAGGCGAAATATTCGAGGCT
ACATTGGGAAAGCTAACACCAATTCTATCTTCATACCATCTTGATAAAGC
TGCCGAAGACGCTTTTCCAAAAAATCTCGAGGAGTTGAGTAAAACAAGTA
AAACCTACCATTCAATCCCAGAGGTTGCGCTAAGAGGAACGAAGGGTACT
GCTGCTATCTATGATATTGTAATGAAAAATCTTATTGCACAACAAAAGGA
CATCCCAAATTTACATGACGGGGCTGGTTTGACTTTATATCGTGGTGATG
ACCGTAATGCAGATCAAATAATTCAGGCTAACGGCTTTTTCGGCTTTGCT
CCTATCACAGTCGAGCATGCAAGACTAATCGCACCATATTGGCAAAACAT
GGCGATGGCAGAAAAATGGCGAGTACAAACAGGAATTCATGGCCCTATGC
CTTTCGTAGCAACAACACCAGAAAAAAGTCCCCCTAAAGGTAAATACCAA
TACGAAATAACGGTACCCATTCCAAAAGAGAGGGCCGAAGGATTGGGCGT
GCTTCTTCTTCACGAAGGAACAAATGAAAAAGATTTTTCCAAATCCAATA
TCATTGCTCTTCGTATGAATGGCCATGAAACTGACTTTGTCACTGGTATT
CCCTTAAAATGGATCGTTGGATGCAGAAAAGAAGAAAAAGAGGAAAAAGA
GTATCTACCTTTAACGGATCCTAAATCTTCTTGTCGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042931XLOC_042931-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000113_pilongenomesc0000113_pilon:856057..857053 -
Properties
Property NameValue
Aaloc70-873:805
Aaloc46-66:956
Aaloc1-42:998