XLOC_042925 (mRNA) -

Overview
NameXLOC_042925
Unique NameXLOC_042925
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000113_pilon:643586..651812-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042925 ID=XLOC_042925|Name=XLOC_042925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=8227bp|location=Sequence derived from alignment at sc0000113_pilon:643586..651812- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCAGACTATCGCAATCATCTTACTCGTTGCAGTATGCTTGGCACA TGCCAAAAAAGGTATGTCATTTATTTATCACTTCTAGTGTGGTAACATAT TTTTCTCCACATTTCAAGGGCAAATTTGATTCGATTTGGATTCTCCAAGA ATTTAAGATACACTTACTTAAAAGAAAGATTTCCAAAAGTATTTCCAAGG TATAAAAAGGAGAGGGGTTCCAAAATAAATCCAGCTTCGGGGCACTACAC TTTCCTCCCTACACCCCTTCTCACAGACTCGGTAGGATTTTTCAGCCAGT GGGGGTTAAAAATAACGGACTGAAACTCGATGGGGGTTTTCCCATGTTTT TTTTTATGGCTGGGGATTCATATTCTTTTGTCAGAAAATTGGGCGGGGAT GGGAAAAATAGCATGATATTTTCCAGTGAGGATTGGTTTATGTGATTATT TTCGGTGGGGACAAAAATTGGAGTATAATTTTCCACTGGGGACGTTATCT TGGCCAATTTTTCCAGTGGAAGGAGTCCCAGTGTGTCTGTGAGAAGGGGG TGTTTTGCTTCTGTGTCCACGTTGCTGGATCCAAAACCAACTGATTTATG AGGGAGGGATCATCAACAAGTCTTTAAAAACTTAATCCGTTCAAATGAAT GAAATCTGCTCTTTAGTGTGATTCTTTTAGACCAGGTAACGGTGTCCCGT TTTGCTCCGAAACAAAATGAAGCCATTCTATTGGTTAAATTCAATGTTTA CGTCATGTCTAACCAATAGAATGGCTTAATTTCGTTTCTTTCTATTCTAG TTTCTTGTTCACAATTCAGTCACGCATGTTCGTTTCTAGTTTAGCAACTC GTTTTGTCATTCATTCGTTCGTTTAGTTTCATTCATTCATTCACTTTGCA TGTTTTTCCTTCTCATTAACATCCGCATCTGTCATTGGCCTTCATTCGAT ACCTAGCTCGCTTTTTTCATACACGCTTCTTTAGTAAGGACTTGAACGAG TAGACTTTTTTTATTGTGGTCGACACTCTTTTTACACTCTTTTTTATTAT AACAATTTTATAAGAACAGTGCGGCTCAGAAAAGTAAAAGAAACTAAAGT CTGTCTCGAAATAATTTGCAGCTGGAGAAAGAAATGGCTGTAACTTTTGA TAGAATTCGAATCAAGTTGCGATTAAGTGCTTGTTAGAAAGATATTCGTG AGTGGAATATTATCAAGTAAAAAAATTGAGAAAAAAAAGGAAAATGAAAA TGAAAAATGAAGAAGAAAAAAATCAACTTCTTGTAGAAATGTGGTAAAAT TACCATTTTCACAGGAGTGATTCTTCAATCTTAGATCATCATCACTGTCA AAAAAATTTTCAAAAATATTCATTCATTCAAAAGATATCAAACAAAAATT ATTGCTAGTTGACTCTATAAAATAGTAAAAACTGGTAAAAAACGACAAAA AAACAGCCTTTCGTCGATCAACCAGCAATAAACTTTGTTTGATATCTTTT GATTGAATGAATATTTTTGAAAAATTTTTTGACATTGATGATGATCTAAG ATTGAAGAGTCACTCCTGTGAAAATGGTAATTACACCACATTTCTACAAG AAGTTGATTTTTTTCTTCTTCATTTTTCATTTTCATTTTCCTTTTTTTTC TCAATTTTTTTACTTGATAATATTCCACTCACGAATATCTTTCTAACAAG CACTTAATCGCAACTTGATTCGAATTCTATCAAAAGTTACAGCCATTTCT TTCTCCAGCTGCAAATTATTTCGAGACAGACTTTAGGTCTTGAACATAAA AACATGGTAAAAGCAATTTAATGCTCAAGAGTCAAAATACGGACCAAGCA TTCTTATAAGAATCAGTGTAATTGTGCTTCAGGTTATTGAATCAAGATAA GGGTATCATTAACACTATTTTTAGCATTTTTCTTTTCTTAAAACTGTTAC AAAGAAGTGGACACGTTTTTTTATAAGAACAGACTATATAAGAATATAAG GCTTCGATTGCCAAAATATTAAGAACAAGTTAAGAACATTTTAATGCTTT GGGGACAAAAATGCTCTCAAAATGTTGAAATTAAGAACACGTTAAGAACT TTTTTAGGCTTAAAGCTCGAAAGGTTAAGAACATCCTAAGGCTTCAAAGA TTTTGGATATTCTTATAAAAAAACGTGTACTTCTCCAAAGTTCTTGTATA AAGAAAGGTGTATGAATTTTGCGTTTTAGTGAAAGAGGCATACATGTACC ACGGCAAAATTGTGACGTTAGAAAAGGACGTTAAGACGGACGGTAAGGGA CTCACTGCATTGACGTTAGAATGAATGAAACTTCTCGACTTTATGACAAC ACACGCACGTACACTTTCTCGTATCATCATTAAATAGAATTCTCTGCTCT GTTGCTCTTTTAATGTAGTTAAAACTACTGAGTCTAATATTTTTGAGTCT GAAAAGTTCTTTCTCTTGGGCATTCTTTCATCATAAAAAGTTTGAAAACT TGACTTTGAAACCTGTGGAATTTTCTTTTTCCAAAATGCTGTCGTCTTTT AGTTGAACAATTTTTGATGAAATGATGATACTAAGTAGTGACGGACTTTT ACGATGACTGTTTAGTTTAGACTTCGACGCTTCTTTACTTCATAGAAAAA CGAAGTGCACCATCATCCAGAGAAGGAGCTGGTAAAAAACGATATTTCTG TGGAGCCCAATGTGCACCATCATGTGCCCCATCTTGTTCACCACAATGTT GTGCCTCCGCTCCAATGGCTGCCCCTATGCCAATGGCTGCCCCAATGTGC GGTGGTATGGGATGTGGACCAATGGCTGCTCCCATGGCTGCTCCATGCGG TGGTATGGGAGCTCCATGTGGTGGTATGGGTGCTATGCCAGCTATGCCAG TTGCTGCTCCAGGACCAATGGGACCTATGGGACCAGCTGGTATGCCCGGT ATGCCCGGTATGATGGGCCCTATGGGACCTATGGGACCAGCTGGTATGCC AGGAGCCCCAGCTCCGCCATGTGCCCCAATCTGTGTTCACTGGTGGGCCG TTATTAGCCAATCTCAACCAAAATACACTTGTCCAGCTCAATGTCAACAA TCCAACTGTTGTACACCACCACCAGCTATGGCTGCTTGCCGCCCATCATG TGCCCCACAAGGATGCTGTGGACCACCAATGATGGCTGCTCCAATGCCTG CCCAAATGCCAGGATGTGCCCCATCGTGTGCACCACAAGGATGTTGTGGA CCACAAATGATGGCTCCACCACCAATGCCCGCTATGATGCCAGGATGTGC CCCAGCATGCGCCCCGCAAGGATGTTGCGGACCCCAAATGATGGCTGCTC CAATGGCCGCCCCTATGCCCGCTATGATGCCAGGATGTGCCCCAGCATGC GCCCCACAAGGATGTTGTGGACCCCAAATGATGGCTGCTCCAATGGCCGC CCCAATGCCAGCATGCCGCCCATCATGTGCTCCAGCTTGTTGCGCCCCAC CACCACCGCCACCAATGCCCGCCTGTCAACCATCATGTGCCCCAATGGGA TGTTGTGGTGCAGCTATGCCAGCCATGCCACCAGCAGGATGTATGCCTTC GTGTGCCCCAAGCTGTTGTATGGGGAAAAAATAAATCCTTCGTCTCCATT TAGTAGATTGAAAAGAAAATTTATACGGCAAGGACTAAATTCCAGACCAG AAATGGTTTTGTTAAACATTTAGAATCGTTGTTGGAAAATGACTTTCTCT CATTTTGCGTCGGGAAATATTAAATATTTCCTAAAAACATATTTTTTATA CAAAAAACCCAAATAATCTTATAATATATTTTATTTTGTATCATATATTG CGTATAGTTTGTTATTATGATTCTTTGAAAGTAAGAATTTTCGACTTGTA GATGAGAACGTTGACCAGCTATTTACTGACTATCTCTCAACTAACTATCA TGCACGTAAAACATCCATTTCAGTTTTTTTAGATATCCACAGATGAAGCT TAACACATCATGCACGTAAAGTATGTTTGTATTTTTTTAAAAAAATTTTC AAACGTCTTAAAGTCAATTCGTTTAATTTTCAAAAGATCTTTAACCATTT AAATACCGTTTAAAAGATACAAAAACTTTTAAATCGATAGAAAAATAGAT CAGTTCATAATATTAATTTTTTTATCATTTGACGTGCCAGATCTAGCTGA AACTTTCTCCAGACCTTCCCTATAGGATGGTTATGCCTCAGGAAAAAATC CCCTAAAATCCCACTGGTGGAACATCCCTTTTTTGGGACATTTCTTTTTT CCCCAGGCAAAACCCTAAGGGCGAAATTTTTTGAAAATTTCAAACTCATT TTCAGACATTATCAAGTATACCATTCGAAAGCTCTCGAAAAACTATATAG AAGACTTTTAAACGGGTATAGCCGATTTCATTACCTAACTCAAGATAATT CACGCAGAAGATGCTATTTATGGTCAATTTTAGACCAAAGTGTAGCGAAA TCTGGAACTTGCGCATGAAATATCTCGAGTTAGGTAAGGAAATCAGCTAT ACACTCATTTTGTTTTACAAGCATAACGTTTATAAGCATACTGAAGCTCA AATTTCCAGAAAAATTAAGCATATGCTAAGCATACCTTGAGGCTCATTAG GAGGCTTGAGGCTTAGAATCATAATTTCCAAAACTTCAGAAGTGTAGCAG TCTGTTTTTGAAACATGAACACACAACTATAAAGATTCGAAATTATATGG TAAACATTTGAAAACAATAGTATGTCTTCATTTTTCTCAAGATTAAAGAG GGGAAAATTTGCGAAAATTTTTACCCCCCTCCCTTCATAATTCTTTTACC AAGCATAGGGTTAAGCATAAGTCGAGGCTCAAAATTGAGCTTTACTTAAG CATAGTGAGCTTCAGCCGAAATTTACCGAATGCTTTATAAAACAAAATGA GTGTAACCGTTTAAAAGTCTTCTATATAGTTTTTCGAGAGCTTTCGAATG GTATACATGATATTGTCTGGAAATAAGTTTGAAATTTTCAAAAAATTTCG CCCTTAGGATTTTGCCTGGGGAAAATAGAAATGTCCCAAAAAAGGGATGT TCCACCAGTGGGACTTTAGTGGATTTTTTCCTGAGGTATAAGCATCCTAT AGAGAAGGTCTGGAGCCCGGGGGGGGGGGGGGGTACTAGTTTGCAAGGTG ACGGGTATGTCCGAGCCGAAAATCGCAAATCGACCCTTTGAGAGACAAAA TTTTGGTGATTTTGGGACCCTTTGAGAGACTTTTTCCTAAAATTTTGTCC ATTTTTTCCAAATTCTGGTTTGATTTTCACCAAATTTTGGTCAAAATTTT TGGAAATCGTGACCCTTTGAGAGAGAAATTTTAGATTTTCGTGATTTTGG GACCCTTTGAGAGACTTTTAAGGAATGAGAAAAGGTACCCTTATGGCTCG CACATACCCGGCACCCATTTTGCCTAAGTACCCCCCCCCCCCCCGGGTCT GGAGAAAGTTTCAGCTAGATCTTATTTTTTTCCTACAAACAGCCTGTATT TTTGTAACACGACCACACTATAGAGGGGGTTCAAAAAATCGAAATTTGTT TTTGCAATTTTGAGTTTTTAACTCTCTCAATTTGACCACTCTGTTTTGAA CTGACTTACATGAAAACGTTCTCAAGAGGCTACACTAACAGATAGGAATG AAAAATCACTACAGTGCAAGGACAATGCCCCCAAACCCCCGTTGTTCTGA GTCTAATTATGCCTAACATTTATTAGAGGCTTATATTTTGGGAAAACTTT TCTCAGATCAAAAGATTCCTATATTTTCTTGCTCAGAGTTTCCTAGCAAT TCCAATGATATAACTGAATCACGACCGCATCATTAAATAAAACGCCTGAA TACAAGAAAGTATAAGAAATTTAATCTACTTTTCCAAAAGGGTTATGTAA AATTTGTTACTTCACAACTGAAAATTTAGAGAGCAATCTGTCAAAAACGA AATCCATTTACATACAGAAACCAGCGTTTTCAATAGAAACGGTTATCGAC AAATGCCGCCATTAGAACAGAAAGGGTTATAATTGAGTTTTTCGCAGCAT GCATGTTACTTTAGGCGTAGAAACTTTCGCGAGCAGAAACTTTCGCGATT TTCGCGAATTTTGGCCCTTTTCGCGAAAGTAAATGTCTTTAAAAATTCTA GGAAGGGCCATTCGCGAAAGTTTATGCTCGCGAAAAATTCTTGACAAAAT AGAAAATGTGTAAAACTTCAAACTTTGAATAAAATGTAACTTTTATGGCA CTTTTTAGCCTGCTAAAAGACTAATAAGTCAAAGGACAAATGTTTCAAGC GTCCCAAGAAGTATTTGTGTCTCTAAGCCATTTTTTCATGTGAAAATTCT CAATTTTACGTCTTGATTCGCGAAAGTTTATGTTCGCGAAAAATATTTTT CCGTTAAATTCGCGAAAGTAAATGTCGTGAATTTCGCGATTTTTCGTACT CGCGAAAGTTTCTGCTCGCGAAAGTTTGTACGCCTAAAGTATATCAAAAA ATATATTATCATTGGTAAAGTTGTCAATGGGACAAGCTGGAGTTTTTACA AGCTCTTTCTTGATTTGGTTGGTCGTTAACCAGTAATACAACAATTTTAT TTTTCTAAAGAATGTGTCATTTTTATTACTTCAAATGACCACTTACTGAA GTATCTTATACAGAACATCCCAAGTCAATCGGCCGATAAACCTAGAAAAA TTTTCAAAAAGGCTCCGATAAATTGCTAAGAAGTATTTTGAATCGTCCTG TGATGTCAAAAAGATTTCGCATCCCCCTAAGGATAACAAATCTTTCATAA AATCAAATCTTTCGAAATCTTCTAAGGGTGGCAATTATTTTTCAAACCCT ACTTCAAATCATCCACCCTCTTCTAGTAGATACTTCACGACCACCTTTCT TATATAGCTGATGTCAGGACCGTCAGGATGGTACCACTGTACCAAAAATG AAATTTTTAGCACCAAAGGATAAAAAAGATCATCAATTTTTAAATTCTTT TATTTGATAATATTCACTCCTGAAAATCTTTTCAACGAGCACAAAATCGC TAGTTAGTTCGTCAAAATAATTTACAAAGGAGACGAAAAAGGTTATAAAC TTGATAGATTACAACATACTTTGGTGGCTGCAACCACAAATCTACTCCTC ATACAGGACCTGCTGGTTGCAGCCACCAAAGTATGCTGTTTATCTTCCCT TGACAATTTTTTTGCTCCTGAAAATCTTTTGGACAAAATCTCTAGTACGA ATTCTATAAAATTTACAGCATTTTTTTGTCTCCTCTTCAAATTATTATGA GACATTATTAAAACTCATGAAAAATTAATTTGAATAATCTTTTTGAAATT AATCGACAAATCTTCTTTCAGTTGAAAAACCAGCATCAACAGAAACCAAA GATTCAAAGTCCAAACCTGCTTCCAAGCGTCAAATGTGTGCTGGCATGTG CTCTCCAAATTGTGCACCAGCTTGCAGTGCTCAATGTTGTGCTGCTCCAC CACCCATGCCTGTAGCTATGCCATGTGCTGCCCCACCCTGTGCCGCTCCA ATGCCCGCCCCTTGCGCTGCTCCACCATGTGCCGCTCCAATGCCCGCCCC TTGCGCTGCTCCACCCTGCGCCGCTCCAATGCCCGCCCCTTGCGCTGCCC CACCATGCGCGGCCGCTATGTATGCTCCCTGTGCTGCCCCACCTTGCGCC GTCCCGATGCCTGCCCCTTGCGCTGCTCCACCTTGTCCAGCCCCTTGTGC AGCCCCGCCCTGCGCCGCTCCAATGGCTGCCCCTTGCGCTGCTCCACCCT GTGCAGCACCTATGATGATGGCTGCCCCTTGTGGTGGAGCTGCTCCATGT GGAGCAATGGGACCATGCGGAGCACAAGGAGCTACTGGAGCAGTAGGAGT TCCAGGACCAATGGGTCCAGCGGGACCAATGGGAATGGGTGGACCACAAG GACCTATGGGACCATGCGGGCCTCAGGGACCAGCTGGAGCTCCAGGTGCC CCAGCTCGACCATGTGCTCCAATTTGCTTACATTGGATGGCTATCATCTC CCAACAACCAACTGCATCTTGTCCACAAGCTTGCCAACAAACAGGATGTT GTCGACCTCCAGTACAAATGGCAGCACCTATGCCAGCTTGTATGCCATCA TGTGCTCCTTCATGTTGTGGCCGCTAA

Coding sequence (CDS) from alignment at sc0000113_pilon:643586..651812-

>XLOC_042925 ID=XLOC_042925|Name=XLOC_042925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000113_pilon:643586..651812- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCAGACTATCGCAATCATCTTACTCGTTGCAGTATGCTTGGCACA
TGCCAAAAAAGATGAAGCAGACTATCGCAATCATCTTACTCGTTGCAGTA
TGCTTGGCACATGCCAAAAAAGTTGAAAAACCAGCATCAACAGAAACCAA
AGATTCAAAGTCCAAACCTGCTTCCAAGCGTCAAATGTGTGCTGGCATGT
GCTCTCCAAATTGTGCACCAGCTTGCAGTGCTCAATGTTGTGCTGCTCCA
CCACCCATGCCTGTAGCTATGCCATGTGCTGCCCCACCCTGTGCCGCTCC
AATGCCCGCCCCTTGCGCTGCTCCACCATGTGCCGCTCCAATGCCCGCCC
CTTGCGCTGCTCCACCCTGCGCCGCTCCAATGCCCGCCCCTTGCGCTGCC
CCACCATGCGCGGCCGCTATGTATGCTCCCTGTGCTGCCCCACCTTGCGC
CGTCCCGATGCCTGCCCCTTGCGCTGCTCCACCTTGTCCAGCCCCTTGTG
CAGCCCCGCCCTGCGCCGCTCCAATGGCTGCCCCTTGCGCTGCTCCACCC
TGTGCAGCACCTATGATGATGGCTGCCCCTTGTGGTGGAGCTGCTCCATG
TGGAGCAATGGGACCATGCGGAGCACAAGGAGCTACTGGAGCAGTAGGAG
TTCCAGGACCAATGGGTCCAGCGGGACCAATGGGAATGGGTGGACCACAA
GGACCTATGGGACCATGCGGGCCTCAGGGACCAGCTGGAGCTCCAGGTGC
CCCAGCTCGACCATGTGCTCCAATTTGCTTACATTGGATGGCTATCATCT
CCCAACAACCAACTGCATCTTGTCCACAAGCTTGCCAACAAACAGGATGT
TGTCGACCTCCAGTACAAATGGCAGCACCTATGCCAGCTTGTATGCCATC
ATGTGCTCCTTCATGTTGTGGCCGCTAATTGAAAAACCAGCATCAACAGA
AACCAAAGATTCAAAGTCCAAACCTGCTTCCAAGCGTCAAATGTGTGCTG
GCATGTGCTCTCCAAATTGTGCACCAGCTTGCAGTGCTCAATGTTGTGCT
GCTCCACCACCCATGCCTGTAGCTATGCCATGTGCTGCCCCACCCTGTGC
CGCTCCAATGCCCGCCCCTTGCGCTGCTCCACCATGTGCCGCTCCAATGC
CCGCCCCTTGCGCTGCTCCACCCTGCGCCGCTCCAATGCCCGCCCCTTGC
GCTGCCCCACCATGCGCGGCCGCTATGTATGCTCCCTGTGCTGCCCCACC
TTGCGCCGTCCCGATGCCTGCCCCTTGCGCTGCTCCACCTTGTCCAGCCC
CTTGTGCAGCCCCGCCCTGCGCCGCTCCAATGGCTGCCCCTTGCGCTGCT
CCACCCTGTGCAGCACCTATGATGATGGCTGCCCCTTGTGGTGGAGCTGC
TCCATGTGGAGCAATGGGACCATGCGGAGCACAAGGAGCTACTGGAGCAG
TAGGAGTTCCAGGACCAATGGGTCCAGCGGGACCAATGGGAATGGGTGGA
CCACAAGGACCTATGGGACCATGCGGGCCTCAGGGACCAGCTGGAGCTCC
AGGTGCCCCAGCTCGACCATGTGCTCCAATTTGCTTACATTGGATGGCTA
TCATCTCCCAACAACCAACTGCATCTTGTCCACAAGCTTGCCAACAAACA
GGATGTTGTCGACCTCCAGTACAAATGGCAGCACCTATGCCAGCTTGTAT
GCCATCATGTGCTCCTTCATGTTGTGGCCGCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042925XLOC_042925-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000113_pilongenomesc0000113_pilon:643586..651812 -
Properties
Property NameValue
Aaloc64-867:805
Aaloc1-60:8228