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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:158559..161763+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042917 ID=XLOC_042917|Name=XLOC_042917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3205bp|location=Sequence derived from alignment at sc0000248_pilon:158559..161763+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagaagattattttcatttttgccaGCCTCCTTTTGGTGCTAACCAT
TGTGGAAGGAGTTGGAAATGCTACAAAGTGCGCTCATCAGGTACAAGGGA
CACCTTTTTTATTCTTTGAgattagaaaaattaaatcaatcacAGCAGTG
TTTTGCGGGTTATCGataattacacgctttttttttataagaatacactt
tataagaatgtccgtgatgaaaatggccaaaaaattaggagtgatgctaa
gaatatcaccatcatggaatttgctactcaagctaagaatgaacattttt
agagcattttcaattaaaaattacCAATTACCCCCAAGAAAGGCTCattc
ctttcacaaaaatgccattttatgcttcagacgtatgtactaaacgTTAA
ATATAGCgagaattaggatcctaacctaagaatgctgtaaggagatttta
ggatgattttcccaaaaaagttaacaatttccatgatgaaatggatttag
aCCATTCTTactaaaaaaaaagcgtgtagtcctTTTACTATCTTTAATAT
AAAAAGACCATGTTTCATCCATATTACGGATTTCTTGCTAACTGCTAATA
ATTTGGATGATTGGGAAACCTTTATtttcatctaacattatataTTCTTT
TCAACTTTAGTGCAGAAAGTCGTTCTTCAAATGTTTGAACGCAACTCGTG
ATGCTTCGATGTGCGGAGAAGAAGCCAAAATGTGTGCTAAAGAATGTATG
GGTGGACGACCAACAAACAAAACAAGACCTACACCTAACCCATGTCTTAT
GGATGTAAGAACTATATTTCTTGCTAACTGTTAATGTTTGGGTAACTGGA
AAACCTTTATATTTATTCAACAAACTAAATTCTTTACAACTTTAGTGCAG
AAAGTCGTTCATGAAATGTTTTAACGCAACTCGTGATGCTTCGATGTGCG
GAGAAGAAGTCAAAATGTGTGCTAAAGAATGTATGGGTGGACGACCAACA
AACAAAACAAGACCTACACCTAACTCGTGCTTTATGGATGTAAGAACTAC
ATTTCTTGCTAACTGTTAATTGTTAATGTTTGGGTAACTGGAAACCTTTA
TATTTATTCATCAAACTATATTCTTTTCAACTTTAGTGGAGAAAGTCGTT
CATCAAATGTTTTAACGCAACTGGTGATCGTTCGATGTGCGGAGAGGAAG
TCAAAATGTGTGCTAAAGAATGTATGGGTGGACGACCAACAAACAAAACA
AGACCTACACCTAACTCGTGCTTTATGGATGTAAGAACTACATTTCTTGC
TAACTGTTAATTGTTAATGTTTGGGTAACTGGAAACCTTTATATTTATTC
ATCAAACTATATTCTTTTCAACTTTAGTGCAGAAAGTCGTTCATCAAATG
TTTCAACGCAACTGGTGATCGTTCGATGTGCGGAGAGGAAGTCAAAATGT
GTGCTAAAGAATGTATGGGTGGACGACCAACAAACAAACCAAGACCTACA
CCTAACTCTTGTTTTATGAATGTAAGAACTACATTTCTTGCTAACTGTTA
ATGTTTGGGTAACTGGAAAACCTTTATATTTATTTAACAAACTATATTCT
TTTCAACTTTAGTGCAGAAAGTCGTACATGAAATGTTTTAACGCAACTCG
TGATGCTTCGATGTGCGGAGAAGAAGTCAAAATGTGTGCTAAAGAATGTA
TGGGTGGACGACCAACAAACAAAACAAGACCTACACCTAACTCGTGTTTT
ATGAATGTAAGAACTACATTTCTTGCTAACTGTTAATGTTTAGGTAACTG
GAAAACCTTTATATTTATTTAACAAACTATATTCTTTTCAACTTTAGTGC
AGAAAGTCGTTCATGAAATGTTTTAACGCAACTGGTGATCGTTCGATGTG
CGGAGAGGAAGTCAAAATGTGTGCTAAAGAATGTATGGGTGGACGACCAA
CAAACAAACCAAGACCTACACCTAACTCGTGTTTTATGAATGTAAGAATT
ACATTTCTTGCTAACTGTTAATGTTTGGGTAACTGGAAAACCTTTATATT
TATTTAACAAACTATATTCTTTTCAACTTTAGTGCAGAAAGTCGTACATG
AAATGTTTTAACGCAACTCGTGATGCTTCGATGTGCGGAGAAGAAGTCAA
AATGTGTGCTAAAGAATGTATGGGTGGACGACCAACAAACAAACCAAGAC
CTACACCTAACTCGTGTTTTATGGATGTAAGAACTATAATTCTTGCTAAC
TGCCAATGTTTCGGTAACTGGAAAACCTTTATATTTATTTAACAAAGCAC
TGAGTAAAGAAAACGTTTCATGTCATCCAGGATGGCGATCTTCAGAGACT
AACTGCTAATGTTTTAATAATAGTACAAGAcactttattttcttcttttc
tttttcttaatcaaaCTTTAGTGCATCATCAAACTGATGcaagaaaaagg
tttgaaaagagtttttgcaataaatttCATTGCATTTCATTAATCTTTAG
TGCCGTAAAGCAGTTTTCAAGTGTAAAAATGGTTCGAGGGATCCAAACGC
ATGCATGGCTTTTGCCAAGAGATGTGCAGGCGAATGTTGTGCCTTAACAG
taagtaaaaaaatgttttctatcCTGTCAGTTGTTGACTCGATAAGCCTG
AATTTCATATCACCCTTAAAACACGAACTGTTACTGCCCTAAATACTGGG
ATTAATTTTCCCgaggatttcgcggatttgtttGTCATccacgaaaataa
gtcccaattGAAATCGCAAAAGGTGTTATCagcgaatttttttttgaatt
aaattcctaaaaaatgtcaattttatctCACAATAGAGTCATCTGCAAAA
TTGAGTCCCTgcgaaatcttgaaattttgcgCATGAGCTttaccgcgaaa
tttaatccccgcgaaaattaaaactattAAAGTATTCATGTTGGTTCGAA
AAATGAAACTCTCAAGCTAGTGAATAAGACTTGACCAAGGAAAACGGACA
ACGATTTGCTTGCTTGCTTTTACTTGATAGGTAGGTCTAAGGACGAGAAG
GGCCAATATATCAATAGCATAGGACAAATTGTGAAGTGAACGTCTTCTTT
CTCTTAAAGTGTCGCAAAAGAATGCAAAGATGTTTGATGAGGACAAAAGA
TTTCAGAATGTGCTCGATAGACGCTCAAAAGTGTTATCGAAGATGCTCCA
ATTAA Coding sequence (CDS) from alignment at sc0000248_pilon:158559..161763+ >XLOC_042917 ID=XLOC_042917|Name=XLOC_042917|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1434bp|location=Sequence derived from alignment at sc0000248_pilon:158559..161763+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaagaagattattttcatttttgccaGCCTCCTTTTGGTGCTAACCAT
TGTGGAAGGAGTTGGAAATGCTACAAAGTGCGCTCATCAGatgaagaaga
ttattttcatttttgccaGCCTCCTTTTGGTGCTAACCATTGTGGAAGGA
GTTGGAAATGCTACAAAGTGCGCTCATCAGTGCAGAAAGTCGTTCATGAA
ATGTTTTAACGCAACTCGTGATGCTTCGATGTGCGGAGAAGAAGTCAAAA
TGTGTGCTAAAGAATGTATGGGTGGACGACCAACAAACAAAACAAGACCT
ACACCTAACTCGTGCTTTATGGATTGCAGAAAGTCGTTCATGAAATGTTT
TAACGCAACTCGTGATGCTTCGATGTGCGGAGAAGAAGTCAAAATGTGTG
CTAAAGAATGTATGGGTGGACGACCAACAAACAAAACAAGACCTACACCT
AACTCGTGCTTTATGGATTGCAGAAAGTCGTTCATGAAATGTTTTAACGC
AACTGGTGATCGTTCGATGTGCGGAGAGGAAGTCAAAATGTGTGCTAAAG
AATGTATGGGTGGACGACCAACAAACAAACCAAGACCTACACCTAACTCG
TGTTTTATGAATTGCAGAAAGTCGTTCATGAAATGTTTTAACGCAACTGG
TGATCGTTCGATGTGCGGAGAGGAAGTCAAAATGTGTGCTAAAGAATGTA
TGGGTGGACGACCAACAAACAAACCAAGACCTACACCTAACTCGTGTTTT
ATGAATTGCAGAAAGTCGTACATGAAATGTTTTAACGCAACTCGTGATGC
TTCGATGTGCGGAGAAGAAGTCAAAATGTGTGCTAAAGAATGTATGGGTG
GACGACCAACAAACAAACCAAGACCTACACCTAACTCGTGTTTTATGGAT
TGCAGAAAGTCGTACATGAAATGTTTTAACGCAACTCGTGATGCTTCGAT
GTGCGGAGAAGAAGTCAAAATGTGTGCTAAAGAATGTATGGGTGGACGAC
CAACAAACAAACCAAGACCTACACCTAACTCGTGTTTTATGGATTGCCGT
AAAGCAGTTTTCAAGTGTAAAAATGGTTCGAGGGATCCAAACGCATGCAT
GGCTTTTGCCAAGAGATGTGCAGGCGAATGTTGTGCCTTAACATGCCGTA
AAGCAGTTTTCAAGTGTAAAAATGGTTCGAGGGATCCAAACGCATGCATG
GCTTTTGCCAAGAGATGTGCAGGCGAATGTTGTGCCTTAACATGTCGCAA
AAGAATGCAAAGATGTTTGATGAGGACAAAAGATTTCAGAATGTGCTCGA
TAGACGCTCAAAAGTGTTATCGAAGATGCTCCAATTAATGTCGCAAAAGA
ATGCAAAGATGTTTGATGAGGACAAAAGATTTCAGAATGTGCTCGATAGA
CGCTCAAAAGTGTTATCGAAGATGCTCCAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:158559..161763 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-717:3110 |
| Aaloc | 523-621:2501 |
| Aaloc | 379-522:2083 |
| Aaloc | 235-378:1848 |
| Aaloc | 91-234:896 |
| Aaloc | 1-90:1 |
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