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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:274685..276603+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042914 ID=XLOC_042914|Name=XLOC_042914|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1919bp|location=Sequence derived from alignment at sc0000248_pilon:274685..276603+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAACTCGGTTCTGGACAATTTGGCGAAGTGTGGGAGGGTGT
GTGGAATAACCAAACGCCCGTCGCCATCAAATCCCTCAAAGAAGGTTCCA
TGGATAAAGAACAATTCCTTGATGAAgccgccattatgaaaaaattacgt
catgataAATTGATCAAATTATACGCAGTGGTGACGATACGAGAACCTAT
TCTCATTATCACGGAACTTATGAAAAACGGTTCTCTTTTGGACTATTTTC
GACATGGAGAAGGAAAACATCTGCAGTTTCACGAACTAGTGGATATTTGT
GCGCAAGTAGCGCAAGGAATGTCTTTCCTCGAATCCAAAAACTTTATTCA
TCGAGATTTAGCTGCTAGGAATATATTGGTCGGCGAAAATAACATCGTCA
AAATTGCTGACTTTGGTAAGAAAATTTGGTTGGGGCCTAGTCACAGATAT
CAGatgtataaaacactagatgtgtcctactttcagcaaagatggtggGT
TATTTTGCTTCCCCTgtcgttgcttgggaaatacagagtagttctatcta
gtgttttatatacgATATCTGTGGGCCTACCCCGGCCATTTATCTAATTG
CCAACTATTTCAtccttttcgattttttgcgGAGAAAACGGCCATGGCAT
TTGGAACTCTTTCGAACCTCTATGAAGCAtgaagtgacgtcatttttctc
ttcttcttcttcaggtTTATCGCGGTGCATCGTGGATGGAGATTATGACG
CACAACAAGGCTCCAGGTTCCCAATCAAGTGGACAGCACCGGAATCGTGC
acttacaataaatttacaacCAAATCGGACGTCTGGTCATTCGGCATTTT
CATGTATGAGTGTGTGACTTACGGGAAAACACCCTACGCTGCCATGTCCA
ATGTAGAGGTGAGAAAATTATAACACTCATCTTTTTCGAAAGATTTATCA
GACCTATGTTTTTCAATATACCGTTTACTGATTGATTTTtgtgtggatta
attttcgcgaattttggccattttcgtgaaaaaaaGTCCTCGCGAAAaat
ctaggaaaatgaaagaaatcaagaggtcaatttgccaaaattttggattc
tcaattcgcgaaaaaaaagtccacgcgaaaattaatccacgtaAAATGTA
ATCACAGAGGACTGAAGATAAGTTGATACtttttttGTCTAAACATTTCA
AAAGCTTTTGTCTTCTTAGTACTTTTAAgtaccaaaaattaaaaagtggg
TCAGTCGCACTATGGGGATTTACATCAAATTAgtttaatatatattttat
tatataaAGTAGAttcccggttattcgaacctGCACTTATTCGAATAATT
CGGTTATTCGAAGTGAGATGGCGTTCCCCTTGGATCTGCTTACTCAACCA
AGGCAAAAATACTCTCGGTTATTCTAACCTCAGTTATTTgaactttcagt
tattcgaagcgATTTTTATTCCCCTTGGGGGTACATTATAGGCTAAATCA
CCCTCAGTTATTTgaactttcagttattcgaagcgATTTCCATTCCCCTT
GAGGGTACATTATAGGCTAAATCACCCTcagttattcgaatttttcttat
tGGGAGATCGTCGAACGGTTATTCGAAGTAGATTCTCAACCCCCTTggag
cttcgaataaccgggagtttACTGTATATTTCATTTGATCTAGTAACTTA
AATAAAGTTCCTTGATTTGAAATAACTGTTTCTTTTCAGACGATTCGCGC
AGTGGAGCATGGTTACCGGTTACCGAAACCACGTGACTGTCCGGACGAAT
TTTACGACGAGATGCTTCATTGTTGGAACGCCACACCAGAAGAACGCCCC
ACTTTCGAAACGCTGCAATGGACGCTGGAAGAATGGTTCCAAGATAAACG
CCAATATGCCGATGAGTAA Coding sequence (CDS) from alignment at sc0000248_pilon:274685..276603+ >XLOC_042914 ID=XLOC_042914|Name=XLOC_042914|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1578bp|location=Sequence derived from alignment at sc0000248_pilon:274685..276603+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAAAGAAACTCGGTTCTGGACAATTTGGCGAAGTGTGGGAGGGTGT
GTGGAATAACCAAACGCCCGTCGCCATCAAATCCCTCAAAGAAGGTTCCA
TGGATAAAGAACAATTCCTTGATGAAgccgccattatgaaaaaattacgt
catgataAATTGATCAAATTATACGCAGTGGTGACGATACGAGAACCTAT
TCTCATTATCACGGAACTTATGAAAAACGGTTCTCTTTTGGACTATTTTC
GACATGGAGAAGGAAAACATCTGCAGTTTCACGAACTAGTGGATATTTGT
GCGCAAGTAGCGCAAGGAATGTCTTTCCTCGAATCCAAAAACTTTATTCA
TCGAGATTTAGCTGCTAGGAATATATTGGTCGGCGAAAATAACATCGTCA
AAATTGCTGACTTTGATGAAAAAGAAACTCGGTTCTGGACAATTTGGCGA
AGTGTGGGAGGGTGTGTGGAATAACCAAACGCCCGTCGCCATCAAATCCC
TCAAAGAAGGTTCCATGGATAAAGAACAATTCCTTGATGAAgccgccatt
atgaaaaaattacgtcatgataAATTGATCAAATTATACGCAGTGGTGAC
GATACGAGAACCTATTCTCATTATCACGGAACTTATGAAAAACGGTTCTC
TTTTGGACTATTTTCGACATGGAGAAGGAAAACATCTGCAGTTTCACGAA
CTAGTGGATATTTGTGCGCAAGTAGCGCAAGGAATGTCTTTCCTCGAATC
CAAAAACTTTATTCATCGAGATTTAGCTGCTAGGAATATATTGGTCGGCG
AAAATAACATCGTCAAAATTGCTGACTTTGgtTTATCGCGGTGCATCGTG
GATGGAGATTATGACGCACAACAAGGCTCCAGGTTCCCAATCAAGTGGAC
AGCACCGGAATCGTGCacttacaataaatttacaacCAAATCGGACGTCT
GGTCATTCGGCATTTTCATGTATGAGTGTGTGACTTACGGGAAAACACCC
TACGCTGCCATGTCCAATGTAGAGgtTTATCGCGGTGCATCGTGGATGGA
GATTATGACGCACAACAAGGCTCCAGGTTCCCAATCAAGTGGACAGCACC
GGAATCGTGCacttacaataaatttacaacCAAATCGGACGTCTGGTCAT
TCGGCATTTTCATGTATGAGTGTGTGACTTACGGGAAAACACCCTACGCT
GCCATGTCCAATGTAGAGACGATTCGCGCAGTGGAGCATGGTTACCGGTT
ACCGAAACCACGTGACTGTCCGGACGAATTTTACGACGAGATGCTTCATT
GTTGGAACGCCACACCAGAAGAACGCCCCACTTTCGAAACGCTGCAATGG
ACGCTGGAAGAATGGTTCCAAGATAAACGCCAATATGCCGATGAGTAAAC
GATTCGCGCAGTGGAGCATGGTTACCGGTTACCGAAACCACGTGACTGTC
CGGACGAATTTTACGACGAGATGCTTCATTGTTGGAACGCCACACCAGAA
GAACGCCCCACTTTCGAAACGCTGCAATGGACGCTGGAAGAATGGTTCCA
AGATAAACGCCAATATGCCGATGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:274685..276603 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 610-789:1740 |
| Aaloc | 418-609:717 |
| Aaloc | 1-414:1 |
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