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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:423083..425458+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042912 ID=XLOC_042912|Name=XLOC_042912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2376bp|location=Sequence derived from alignment at sc0000248_pilon:423083..425458+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCAATCACAAGCAAGTTTGGGTTACCTTTGAGACAGGTATGagc
gttttcttttttttttgacttttgtatttAATGTATTTAAATAGTACGTT
TTATCCCAGTGATAAATTAAGTTGTAATAGATAAATTCTGACTGAATTTT
TTCATTGATCTTCCATTTCCAATTTTCAGACAATTCGTCATTGCACCAGT
CAAATGAAATATGATGGTCCTGTTGAAAAGTGTAAGGaatcaaaagaaac
tttttaattagtttttttcaattcgGTTGTTGTTGACTCGCATATTTTCA
TTTCACAAAATATAAAGAAAGATTTATTGGGATGTTCCATCAAATTTCAA
TACAGGGTGAGGGTtgacaaaccttttcaagtcaaaaaagattcttaata
aatgtgtagataccccctgaaaaatgacaaaatttcaaGGTGAACCCTTG
GAAATTTTTTAACTTCAACCCCCTTTAACCTCTTTTAAACCCTCCCTTGA
AATACTTCTCggattatcccctggaaattttcgTCAACCCCCTGTACGGA
GatgaaatggaatggcccaatgacCTCTCATTTTCTTTAGGTATGAATAG
TGTACAAATTCTTGGTCGAGTCGGTCAAGACCCAATCACTCGTGgtgaaa
atgacaattttgtgACCTTCAGCATGGCTACATCTAAAACGTatgcaaag
aaaaatatgacAGGGGAAACTGGTTTGTTATCAatttgtcaattctaatt
tttacattttaattatttctttcattgctttgtatttgtttacgtttttg
CATCCTAGAATCTTTATGTAGTACTGACGACtctgtattttcattttatt
ttcagacTACAACACACGAACACAATGGCACAACATCACAGTCTTTAGAC
CTTTTCTCATTGAACGTGTCCAAAAACAAATCTCTAAAGGGTATGGTTAT
TTTTTCCATCatcaaactaaaaaaattggctttttttttgtttaatcgTT
TCAAGGGTACTAAGTATTTCCGCTCATCTCGTATatattttattacttta
ttttcgATAGGACAAGAGTGATGGTACAAGGAGCCATAGAATATGTTGAT
TATACAAAACCTGACGGAAATAGAGTTCTGATGACCAGGATTGTACCAGG
TACTAATTTTGTGGTTCATTTTACACcattttacacgtttttttataaaa
atatactttatgAGAAAATTCATTATGAAATTGACCGGAAGATGAAAAAT
ATGGTAAAACCACCATCATGGttccacaaaaatgccaaatttttgccTAA
GGTTtttaccgtaagaatatttcggGATGATTTGTCCCAAAAAGTTAAAG
ATATTCACGATGAATAGGacaaacaccattcttataaaaaaagcgtgtac
gccACTTTTCATCAACAATGTTCCATCTTTTTCACAATCACCTCAGACTT
CTTTTTGTTTCTGTATAATTTCTATCAATCGCTGTTATTAACATTGGGTC
TAAAAAAGGCTAGCGAAATCTAACGCCCTCATTAATCATTGTCATTGAAC
CCAATTATTAAACTGAGTCgtactcaaaaacaaaaaagaactaattccga
gaaatcgttaaaaccttaaaaattgaattatcaaaattaGCATGGTTACA
CGAAAAGGGATAAAATCTGAAAACTCTAACAAAGTAGTTTCGATTAACAT
GGCTATGCTGAAGAAATCAGTGCTGGGCTTTAGAGTcatacacttttttc
ttttataagagcaatgCCGAGCCTAAAATTagtcaatttcaagcaattta
gttCTAGTAAAAATTGAGTgaagcctaaaatacctcaattacaccaaaaa
attaagaacaggataagaacaatttgaggcttagATTGCCAAAACGAaaa
agaacagccgagcctcagcaaagtTTTACTGGCTGTtgtaaaaaaaggtg
taaaccaaaagatttttcttcattctgtgaaaagtaatttgaaaattttg
aagagcttTGACCCTCGGTAAGAAAAACCGTTTCCAATTTAACTTTTCGT
TTCTATTTCCAGAGGAATTCTGTTCTTAATTAACGAAGACTTGAAAGTTT
GATTTAATAAACAATTTTAAACAATCTTTATAAGTGAATCATTAGATGAT
CTTCCTTTGATCCTAACATTTCATCCAATCGACCAAATTTTATAAATGAG
TAAAGTTCATCCTTTCTGATgctaaattcgtttttttttgtatacTTGTG
AAAATCCACTCAAAAAGAGAATTACGCCTTGTAGTTGACTTCCTCAATCA
ACgataatctttgttttttttttcagatgacaTCTTCATTCTCTCCGGCA
CTGACCACGATGCACAAACTCACTGA Coding sequence (CDS) from alignment at sc0000248_pilon:423083..425458+ >XLOC_042912 ID=XLOC_042912|Name=XLOC_042912|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000248_pilon:423083..425458+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCCTCAATCACAAGCAAGTTTGGGTTACCTTTGAGACAGATGGCCTC
AATCACAAGCAAGTTTGGGTTACCTTTGAGACAGACAATTCGTCATTGCA
CCAGTCAAATGAAATATGATGGTCCTGTTGAAAAGTACAATTCGTCATTG
CACCAGTCAAATGAAATATGATGGTCCTGTTGAAAAGTGTATGAATAGTG
TACAAATTCTTGGTCGAGTCGGTCAAGACCCAATCACTCGTGgtgaaaat
gacaattttgtgACCTTCAGCATGGCTACATCTAAAACGTatgcaaagaa
aaatatgacAGGGGAAACTGGTATGAATAGTGTACAAATTCTTGGTCGAG
TCGGTCAAGACCCAATCACTCGTGgtgaaaatgacaattttgtgACCTTC
AGCATGGCTACATCTAAAACGTatgcaaagaaaaatatgacAGGGGAAAC
TGacTACAACACACGAACACAATGGCACAACATCACAGTCTTTAGACCTT
TTCTCATTGAACGTGTCCAAAAACAAATCTCTAAAGGacTACAACACACG
AACACAATGGCACAACATCACAGTCTTTAGACCTTTTCTCATTGAACGTG
TCCAAAAACAAATCTCTAAAGGGACAAGAGTGATGGTACAAGGAGCCATA
GAATATGTTGATTATACAAAACCTGACGGAAATAGAGTTCTGATGACCAG
GATTGTACCAGGACAAGAGTGATGGTACAAGGAGCCATAGAATATGTTGA
TTATACAAAACCTGACGGAAATAGAGTTCTGATGACCAGGATTGTACCAG
atgacaTCTTCATTCTCTCCGGCACTGACCACGATGCACAAACTCACTGA
atgacaTCTTCATTCTCTCCGGCACTGACCACGATGCACAAACTCACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:423083..425458 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 403-450:2329 |
| Aaloc | 313-399:1062 |
| Aaloc | 229-309:858 |
| Aaloc | 97-225:593 |
| Aaloc | 43-93:180 |
| Aaloc | 1-42:1 |
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