XLOC_042907 (mRNA) -

Overview
NameXLOC_042907
Unique NameXLOC_042907
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000113_pilon:933927..935178+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042907 ID=XLOC_042907|Name=XLOC_042907|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1252bp|location=Sequence derived from alignment at sc0000113_pilon:933927..935178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGCATttaagaaagaatttaagtGTTCAAATTTCGGGTTGAGTTA CCACTGTGTTGGAGATTTCTATAGACCACAGGTAGTTTATTTGGTAAAAA TTATATGGTGTAAACGAAACATTCTCAACAAGTcattataaatctttttt tcactttttcacaaaCCTTTCATGAACGAAACAAGGATACTTGCTCAATT TAAGCTTTAATTTAGTGGTCCATTTCTAAGTGGCCTGAGTGACTACAAAT GATTTCTTGTATTGTACGAGGGATTAAAAAATAGTCGAAATTTCATTTCC GGGGCAAAATATCTCGATGCCAGGGGTCCAGGGGGACaaggtaaaaatta aaatctctcGCTATAACATCATACACTTAATTAGCCTTTTTGGAAAAGGG CCATATCAATTGCCTTTACTCTGattacaaagcaaaatatctttccaaat gAAATATATTCATCTCTTTTTACTTTAGTGCATCCCTCAAATTGCACTGT TGGTAATTCGAGTTATCATCGCCTTATACACCACTGCATCCATGTTAGCT GATATGGTTGATTTCTTTGAAACAAAGAGTAACGGTGGCCGTTGGTTTGT ATTTTTCACATCGTGGAATTATCTGACTTGTGTATTTTACTTTATACTCG TCACAATCGGCACCATTTCTTATTACTCAAAAAAGCGCCAAGGTTGCGAC CCCGACGTGCCAATGTCTTCAATGAATCCAAATCAATATGCGTCTACAAC TGATATGCTGGAATCTGGCTCCCCCGATCTATCAACCGAATCGGAAGAGC ATCTGGGAAATCGGTTGAGCTGTTACGAAAAGATCATTTGGTTATTTTTC AATATCAGTATTGCAGTTTGTACGTTGGTAGTTGCTTCGTATTGGATTGT GCTTTTTGATGGTAGCCAGGATCTTGATTTCTTTAACATCGACCGACATG GTATCATTCTGGCGATGGTTTTGATCGATTTCTCATTACACCGTATTCCA TACAGAGTCCTCCATTTTGTTTATCCAATGATCTTCTTCATTCTTTACTT CATTTTTCATGTTATTTACTCATTCGCCTCTGAGGATGTCATTTATTCAC CGATTAACTGGCAAGATAATCCGACCAAAGCTGGTATCTTGTTCTTGGTC ATTATTGTTCTGTCAGGTGTCTTCCATTTCGTATTCTATTGGATCGACTA TGGTaaaaaattgttaggtgaaaaatgttgccaaacaaatacaatggctt ga

Coding sequence (CDS) from alignment at sc0000113_pilon:933927..935178+

>XLOC_042907 ID=XLOC_042907|Name=XLOC_042907|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000113_pilon:933927..935178+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAGCATttaagaaagaatttaagtGTTCAAATTTCGGGTTGAGTTA
CCACTGTGTTGGAGATTTCTATAGACCACAGATGCCAGCATttaagaaag
aatttaagtGTTCAAATTTCGGGTTGAGTTACCACTGTGTTGGAGATTTC
TATAGACCACAGTGCATCCCTCAAATTGCACTGTTGGTAATTCGAGTTAT
CATCGCCTTATACACCACTGCATCCATGTTAGCTGATATGGTTGATTTCT
TTGAAACAAAGAGTAACGGTGGCCGTTGGTTTGTATTTTTCACATCGTGG
AATTATCTGACTTGTGTATTTTACTTTATACTCGTCACAATCGGCACCAT
TTCTTATTACTCAAAAAAGCGCCAAGGTTGCGACCCCGACGTGCCAATGT
CTTCAATGAATCCAAATCAATATGCGTCTACAACTGATATGCTGGAATCT
GGCTCCCCCGATCTATCAACCGAATCGGAAGAGCATCTGGGAAATCGGTT
GAGCTGTTACGAAAAGATCATTTGGTTATTTTTCAATATCAGTATTGCAG
TTTGTACGTTGGTAGTTGCTTCGTATTGGATTGTGCTTTTTGATGGTAGC
CAGGATCTTGATTTCTTTAACATCGACCGACATGGTATCATTCTGGCGAT
GGTTTTGATCGATTTCTCATTACACCGTATTCCATACAGAGTCCTCCATT
TTGTTTATCCAATGATCTTCTTCATTCTTTACTTCATTTTTCATGTTATT
TACTCATTCGCCTCTGAGGATGTCATTTATTCACCGATTAACTGGCAAGA
TAATCCGACCAAAGCTGGTATCTTGTTCTTGGTCATTATTGTTCTGTCAG
GTGTCTTCCATTTCGTATTCTATTGGATCGACTATGGTaaaaaattgtta
ggtgaaaaatgttgccaaacaaatacaatggcttgaTGCATCCCTCAAAT
TGCACTGTTGGTAATTCGAGTTATCATCGCCTTATACACCACTGCATCCA
TGTTAGCTGATATGGTTGATTTCTTTGAAACAAAGAGTAACGGTGGCCGT
TGGTTTGTATTTTTCACATCGTGGAATTATCTGACTTGTGTATTTTACTT
TATACTCGTCACAATCGGCACCATTTCTTATTACTCAAAAAAGCGCCAAG
GTTGCGACCCCGACGTGCCAATGTCTTCAATGAATCCAAATCAATATGCG
TCTACAACTGATATGCTGGAATCTGGCTCCCCCGATCTATCAACCGAATC
GGAAGAGCATCTGGGAAATCGGTTGAGCTGTTACGAAAAGATCATTTGGT
TATTTTTCAATATCAGTATTGCAGTTTGTACGTTGGTAGTTGCTTCGTAT
TGGATTGTGCTTTTTGATGGTAGCCAGGATCTTGATTTCTTTAACATCGA
CCGACATGGTATCATTCTGGCGATGGTTTTGATCGATTTCTCATTACACC
GTATTCCATACAGAGTCCTCCATTTTGTTTATCCAATGATCTTCTTCATT
CTTTACTTCATTTTTCATGTTATTTACTCATTCGCCTCTGAGGATGTCAT
TTATTCACCGATTAACTGGCAAGATAATCCGACCAAAGCTGGTATCTTGT
TCTTGGTCATTATTGTTCTGTCAGGTGTCTTCCATTTCGTATTCTATTGG
ATCGACTATGGTaaaaaattgttaggtgaaaaatgttgccaaacaaatac
aatggcttga
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042907XLOC_042907-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000113_pilongenomesc0000113_pilon:933927..935178 +
Properties
Property NameValue
Aaloc403-852:803
Aaloc82-402:479
Aaloc1-81:1