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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:223412..226747- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042887 ID=XLOC_042887|Name=XLOC_042887|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3336bp|location=Sequence derived from alignment at sc0000248_pilon:223412..226747- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTCTCGGCCTGTGTTGAAGCGGAGAGACTTGAGGGTTGATCAGCA
GATCTTGTCTATTATTAATTTGGTCATCTTTTTGTCCTATGGCCTACTCA
AGTGTTCCAATATCTTTCCAACATTAAAAGTAAGATAAAAACTCTACACT
TAAGTCTTGTCCGGGCATTGTCCAGGGAAAATAAATATTCATATTATATT
TTCAATTAGAAATCCAACTTTGGTTATTTAATTAAGTTTGTTTTTATTTT
AGGCATCGAAAGAATTACCGGACGAAGATCAAAAACCGGTCGCCAAACCG
AAAGAGAAATCTCCAAAAGCCGAAAAGAAAAAGGAGAAAAAACAAAAGAA
AAAGAAGAAGAAAAAGAAGGGCAAAGGAGGAGAGTTGGGAAAGATCGATG
AAGATGTGGGGGAGAGTGACGTCATCACTGACCCTCCTTCGTCATCGTTC
GTCGATGAATCTTCAGAATCAAAAATCGAAAGTTCAACGAAAGAGGTGCG
CTATGTTTTTGTTTTGTTTTACGCACTATCTATATATAAATGCATGCTTG
TATAACGTACATCATTTAACCCATTCGTCTTTTCATTTCGAGGTCTCGCC
TTTCCCAAACAAAAGCTTTGGAATTCTCCAGAAAAAACTTATTTTGCCAT
TAATTCGATGAGGACCGTTTGAAATTGTTATGATTTTACTTAATTCCCTA
TAACTTAAAATCTCCTCCATTTTCATAATCTTTAATTTACTTAAACAAGT
TAAATTTGTATCCTTACTTCTCCATTAGTTATAAATGGATACTTTAAAAT
GTCTATTAAAACAAACGATCTCTACACTCATCAAAAGTTTGCACATAAAT
TGTTAACAATTAAACTGACTTCACTCACCTTGCACTCACTAACCACTAAC
CTCATGAAGGAATTTTATGGAATGAAATACTTATGCCTAATTATTGGCAT
TGTTTAGGAATATGGGGCAGATCAAGTGGACGAGGAAAACAACGTCACGT
TGGAAAAATTATCGACACTTGTCGGAAATGGTGACGTCATTGCTTCTGGT
GGGGAGGAGGACGCTCAAGAAATTCACGTCGAATTCACGGATGATGAACT
CGCTGATTCTGAAGGCAGCCAATCAGAAGACGAAAAACAACCAAGTGACC
GGCTGAATACCCAATTAGAAAAAAGTCGGGAGAGTGTGTTGGATAGTCTG
GATGGTTTCACCAGGAACGATAGTACTGGTAGTCAGTTGAGTGGATTTTC
GGTTATGCAAACAGGCCCTGTGTACGAAAACGTTACGCAAGTAGTCCCTG
AAGAATTGAACATCCAATATGCGGACGATATATTTCGAAATTGTGCTGCT
CGCTATCAAATCTTTGTGGTTAAAACACATGATTTCAAATCGACTGTAGA
TGCCTTCACAAACATGGTACCTTTACTGAAAGAAAATGCAGAATTGAAAG
ATTATTTCGAAGCTTATGGAAAGTTGTTGGAGCAAGAAAGTGAAAAAGAT
AATCAAGGTCAGATTCACCAAAAAGCTCTCTTTCGTAACTAGAAGTTGAT
AAATGTATTTTTAGATGGTTTATCATCCATTGTTGTCAAGCTCCTCAAAA
ATTAGTTTAGAGGCTAGTAACAGTAGAAACTTTAGTGAATATTGAGGTTA
GTAATATGTTGATATTTTTTGTATTGCTTTAGTTGAGATGTCAGACGTGA
ACGTTTCGTTGCAAACTCTTCGCGCCAATGGAAACCAGCTCTTAGATATC
ATCGATAATGTTCGGCCGCACGTAGATCGCTTGATCGATGACGCGTCCAA
TGTTGACGTCATTGAGTATGTCAAAGGCAAGATGGTAGAAGGTGTACAGT
TGGGCATCACATCAAAGTTTTCTGCACCAGGCAAATATCGTCGTAACATG
AAGCATTTGCGAAAAGCTTTGTCCAACATTGATGCAGTTCAGGAAGAAGT
GAAAGCTATTTTAGAAGATGATGTTTTTCTTGATCGAAATGAGTGTTCAG
ACAGTGATGAAGAAAACGGGCCAACCACGCCACCACAACCACCATCAGAT
AATGAATCCGATATCGTTCCCATGGTTCAACAAGAAGACGTCCCAACAAA
CGATATCTTCCACAAACTTGACAACATGTCTGTGGAAGAATCTCTTGAGT
TGAGTGGAGAAACGAAGGTAATCATCCTTCCTTCCTCTACTCTTAATTCT
AAATTGATCAGAAATTACTCTCCAGCTGAGCCCTTTCAATGAGTAATCCA
TTGATTTTATTATTCTGATTAAATGAGGGTTCATTAAAATAATTCTTAAT
CCCTAATGACTACTAACAACTAATCCACCTACAATTCTGGAGGTCTCTAA
TAACTGTCACATTAAAATTCTCTTTAACACGCGTGAATTTTGCCTTTCTA
GTAATTTTTTTCCTGTACTTGGTCGGAATTTCTTTAAAAAATTGGCAAAA
TTGGCGCGCATAAATAATCATCCATAATCATGCACGCTACAATATGCACG
TTTTAAGTCTAAACAAGATTCTATAAGATCCTGCATCTCAATATGACCAC
AGTTCAATCTATATAAAACTTTAACCACGTCATTTCACAATGTGCCCGAA
AAAGCGAACAAATCTTTATATAAGGTAAATCCCCAAAACTTGTTATCAAA
ACTGTGCTTAAAATAATTTGAAAGAAGATTACGATTGTTGTTCGATCTAA
AGATATTCAATCCCCAAGATGATTGAATAAGTTTTTGAGATTTGAATATT
AAGTATACAAGTCATAAAATTTGGCATGAAGTATGAGGATTTTACTTTAC
ATAAAATTTGTCCGTTTTTTGGGACACACTATGTATTTATAAGCTTTTTA
CAATACCATTTTACTGAATTGAGTTATTATTTTTCTCCTTCGCAGCCGGT
GGATGGCAGTCAATCACCATCTTATGAACGTAAATTGATGACGTCAGACA
ACAAAAAGGCAAACATGACCCTGCTGGAACAATCTATCGAAGCTGAACGT
CAAACGTCACCAGAACCTCAAACTATGACGTTCGTTATCGAAAACATTCC
GGAAAACGGTAAAAGTCCGGTCAACACCAGTACTCCGACCGATAAAAATG
CAATCCAACAGATAATTGTGGAAGAAGAGGAGCACAATACTTTGGACTTT
GGTAAATACATATTGGTTGACCCGAACACAGGAGATATTGCCGTGATGAG
GAATCGTTCACGGAGTTTAGACAGCCTCGTTTCCATACAATCTAATCGAT
CAAGTATCTCCAAGTTTGGCAGTTTTGAGTTCGTCACAGACTATGAATTG
ACAATCGCTGAGAAAAACCAACAATTGAAAAGTTGA Coding sequence (CDS) from alignment at sc0000248_pilon:223412..226747- >XLOC_042887 ID=XLOC_042887|Name=XLOC_042887|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3696bp|location=Sequence derived from alignment at sc0000248_pilon:223412..226747- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACTCTCGGCCTGTGTTGAAGCGGAGAGACTTGAGGGTTGATCAGCA
GATCTTGTCTATTATTAATTTGGTCATCTTTTTGTCCTATGGCCTACTCA
AGTGTTCCAATATCTTTCCAACATTAAAAATGGACTCTCGGCCTGTGTTG
AAGCGGAGAGACTTGAGGGTTGATCAGCAGATCTTGTCTATTATTAATTT
GGTCATCTTTTTGTCCTATGGCCTACTCAAGTGTTCCAATATCTTTCCAA
CATTAAAAGCATCGAAAGAATTACCGGACGAAGATCAAAAACCGGTCGCC
AAACCGAAAGAGAAATCTCCAAAAGCCGAAAAGAAAAAGGAGAAAAAACA
AAAGAAAAAGAAGAAGAAAAAGAAGGGCAAAGGAGGAGAGTTGGGAAAGA
TCGATGAAGATGTGGGGGAGAGTGACGTCATCACTGACCCTCCTTCGTCA
TCGTTCGTCGATGAATCTTCAGAATCAAAAATCGAAAGTTCAACGAAAGA
GGCATCGAAAGAATTACCGGACGAAGATCAAAAACCGGTCGCCAAACCGA
AAGAGAAATCTCCAAAAGCCGAAAAGAAAAAGGAGAAAAAACAAAAGAAA
AAGAAGAAGAAAAAGAAGGGCAAAGGAGGAGAGTTGGGAAAGATCGATGA
AGATGTGGGGGAGAGTGACGTCATCACTGACCCTCCTTCGTCATCGTTCG
TCGATGAATCTTCAGAATCAAAAATCGAAAGTTCAACGAAAGAGGAATAT
GGGGCAGATCAAGTGGACGAGGAAAACAACGTCACGTTGGAAAAATTATC
GACACTTGTCGGAAATGGTGACGTCATTGCTTCTGGTGGGGAGGAGGACG
CTCAAGAAATTCACGTCGAATTCACGGATGATGAACTCGCTGATTCTGAA
GGCAGCCAATCAGAAGACGAAAAACAACCAAGTGACCGGCTGAATACCCA
ATTAGAAAAAAGTCGGGAGAGTGTGTTGGATAGTCTGGATGGTTTCACCA
GGAACGATAGTACTGGTAGTCAGTTGAGTGGATTTTCGGTTATGCAAACA
GGCCCTGTGTACGAAAACGTTACGCAAGTAGTCCCTGAAGAATTGAACAT
CCAATATGCGGACGATATATTTCGAAATTGTGCTGCTCGCTATCAAATCT
TTGTGGTTAAAACACATGATTTCAAATCGACTGTAGATGCCTTCACAAAC
ATGGTACCTTTACTGAAAGAAAATGCAGAATTGAAAGATTATTTCGAAGC
TTATGGAAAGTTGTTGGAGCAAGAAAGTGAAAAAGATAATCAAGGAATAT
GGGGCAGATCAAGTGGACGAGGAAAACAACGTCACGTTGGAAAAATTATC
GACACTTGTCGGAAATGGTGACGTCATTGCTTCTGGTGGGGAGGAGGACG
CTCAAGAAATTCACGTCGAATTCACGGATGATGAACTCGCTGATTCTGAA
GGCAGCCAATCAGAAGACGAAAAACAACCAAGTGACCGGCTGAATACCCA
ATTAGAAAAAAGTCGGGAGAGTGTGTTGGATAGTCTGGATGGTTTCACCA
GGAACGATAGTACTGGTAGTCAGTTGAGTGGATTTTCGGTTATGCAAACA
GGCCCTGTGTACGAAAACGTTACGCAAGTAGTCCCTGAAGAATTGAACAT
CCAATATGCGGACGATATATTTCGAAATTGTGCTGCTCGCTATCAAATCT
TTGTGGTTAAAACACATGATTTCAAATCGACTGTAGATGCCTTCACAAAC
ATGGTACCTTTACTGAAAGAAAATGCAGAATTGAAAGATTATTTCGAAGC
TTATGGAAAGTTGTTGGAGCAAGAAAGTGAAAAAGATAATCAAGTTGAGA
TGTCAGACGTGAACGTTTCGTTGCAAACTCTTCGCGCCAATGGAAACCAG
CTCTTAGATATCATCGATAATGTTCGGCCGCACGTAGATCGCTTGATCGA
TGACGCGTCCAATGTTGACGTCATTGAGTATGTCAAAGGCAAGATGGTAG
AAGGTGTACAGTTGGGCATCACATCAAAGTTTTCTGCACCAGGCAAATAT
CGTCGTAACATGAAGCATTTGCGAAAAGCTTTGTCCAACATTGATGCAGT
TCAGGAAGAAGTGAAAGCTATTTTAGAAGATGATGTTTTTCTTGATCGAA
ATGAGTGTTCAGACAGTGATGAAGAAAACGGGCCAACCACGCCACCACAA
CCACCATCAGATAATGAATCCGATATCGTTCCCATGGTTCAACAAGAAGA
CGTCCCAACAAACGATATCTTCCACAAACTTGACAACATGTCTGTGGAAG
AATCTCTTGAGTTGAGTGGAGAAACGAAGTTGAGATGTCAGACGTGAACG
TTTCGTTGCAAACTCTTCGCGCCAATGGAAACCAGCTCTTAGATATCATC
GATAATGTTCGGCCGCACGTAGATCGCTTGATCGATGACGCGTCCAATGT
TGACGTCATTGAGTATGTCAAAGGCAAGATGGTAGAAGGTGTACAGTTGG
GCATCACATCAAAGTTTTCTGCACCAGGCAAATATCGTCGTAACATGAAG
CATTTGCGAAAAGCTTTGTCCAACATTGATGCAGTTCAGGAAGAAGTGAA
AGCTATTTTAGAAGATGATGTTTTTCTTGATCGAAATGAGTGTTCAGACA
GTGATGAAGAAAACGGGCCAACCACGCCACCACAACCACCATCAGATAAT
GAATCCGATATCGTTCCCATGGTTCAACAAGAAGACGTCCCAACAAACGA
TATCTTCCACAAACTTGACAACATGTCTGTGGAAGAATCTCTTGAGTTGA
GTGGAGAAACGAAGCCGGTGGATGGCAGTCAATCACCATCTTATGAACGT
AAATTGATGACGTCAGACAACAAAAAGGCAAACATGACCCTGCTGGAACA
ATCTATCGAAGCTGAACGTCAAACGTCACCAGAACCTCAAACTATGACGT
TCGTTATCGAAAACATTCCGGAAAACGGTAAAAGTCCGGTCAACACCAGT
ACTCCGACCGATAAAAATGCAATCCAACAGATAATTGTGGAAGAAGAGGA
GCACAATACTTTGGACTTTGGTAAATACATATTGGTTGACCCGAACACAG
GAGATATTGCCGTGATGAGGAATCGTTCACGGAGTTTAGACAGCCTCGTT
TCCATACAATCTAATCGATCAAGTATCTCCAAGTTTGGCAGTTTTGAGTT
CGTCACAGACTATGAATTGACAATCGCTGAGAAAAACCAACAATTGAAAA
GTTGACCGGTGGATGGCAGTCAATCACCATCTTATGAACGTAAATTGATG
ACGTCAGACAACAAAAAGGCAAACATGACCCTGCTGGAACAATCTATCGA
AGCTGAACGTCAAACGTCACCAGAACCTCAAACTATGACGTTCGTTATCG
AAAACATTCCGGAAAACGGTAAAAGTCCGGTCAACACCAGTACTCCGACC
GATAAAAATGCAATCCAACAGATAATTGTGGAAGAAGAGGAGCACAATAC
TTTGGACTTTGGTAAATACATATTGGTTGACCCGAACACAGGAGATATTG
CCGTGATGAGGAATCGTTCACGGAGTTTAGACAGCCTCGTTTCCATACAA
TCTAATCGATCAAGTATCTCCAAGTTTGGCAGTTTTGAGTTCGTCACAGA
CTATGAATTGACAATCGCTGAGAAAAACCAACAATTGAAAAGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:223412..226747 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1408-1848:442 |
| Aaloc | 925-1407:1653 |
| Aaloc | 373-921:2380 |
| Aaloc | 130-372:3085 |
| Aaloc | 1-129:3337 |
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