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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:249447..252464- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042885 ID=XLOC_042885|Name=XLOC_042885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3018bp|location=Sequence derived from alignment at sc0000248_pilon:249447..252464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAAGACACTAGACAAAGGACGAAGAGTGGAGCCAAACCCGATGT
CCGCCTTGCTTTGATTGGCGCACCAAAAGTCGGGAAATCAGGTAAATAGA
TTTTTTAAGCAGGAACATTAGAATTCAAAGTTTACAGTCAAATCTTAAAC
CAGTTGATATCTAATAGTACAAGATTTCAAAACACCACGATATCGAACAT
TTAAGAGGCAAATTTTGCAGAGGGAAGACGAGTCCAGTGGGGTAACATCA
GAAGTCATAGTCATAAGACATCAACAACGCAATCAATTTAAAGAAATGTA
AAAATCTTTAACCTCCCTAGATTTTTAAAATTACTATTTACAACATCTTA
CACTGTAGGAATATAAAGTTTAACGGTGACGTAATAAAAACATGGTACAC
ATCCCGGGGGGGGGGGGTACTAGGGCAAAATGGGTTACGGGGATGCTCCG
CTGGTCAGGGTACCTTTTTTAACCTCCACGAGTCCCTGGTAGGGTCGCTA
AAACACCAAAATAGAAAAATCATTCCCTCGTAGGGTGCCTTTTTTTGGAA
AATTTGGGGAAAATGTAGAAAATTTGAGAAAATTTTGGAATTTCAGTCCC
ATTCAGGGTCACTTTTTTCGCAAATTTCGAGTCCTACGTAGGGTCCATTT
TTCGAACCTCGGCGGAGCACCCCCGTCGGTTGACAAGGGTAGTACCCCCC
CCGGGGTACACATATACGAAGATCGTCAAAATGCAACGTATTGTAATATA
AACACATGAAAGGCCATGTTTTCATTGAAAGTCTTTATTTTTGAATCATC
GAGGGTCCTTGTTAGTTGCCATAACATAATACCTCTTCTCGAAACATAGC
AAGTTGAATGGAAAGCCAAGAAAAGCACTCAAGTAATTCCAACGCAACGA
ATAGTTTTTGGCAGTGTTACTTGCAATCCATAACAAACGAACATGGAGTG
AATTACAAACTGTAAAGGAAAAGGTTAAAGTTGTAGGGTATCATCAAGGC
CTAGCTAACCGTTCTGATAAATTAGGCTTATAGGATTCATTGATTAATAT
TTCCGGGGCATATTCCTTCTCCCTGTTAAAAAATGAAAACTTTCTTTTTT
AGCAATCAGTGTTCGATTTCTGACACGAAGATTCATCCACGAATACCAGA
GAAGCGTGGAACATACTTATCGTAGAAACCTGGAGTTTGGGAATGAAGTC
ATTGAATATGTGTTAAGGGACTCATCAGGAACGGTAAGACTTTGATGGAG
TAATACACAGGTTGCAAAATTAAAAGTCTGAAGACAAATCACGCTTTTAC
TCGAAATTTCCATGTGCTTGTTACATGACATTTATTTCTGATTGGTTCGA
ATTTATTGACACTAATAAAGTAATTAACTGTTGTAATTAAAAGTTGTAAA
GCAAGTAACATGGGAATAACATCACGGGAACTTTTTCGAGTAATCACATG
TTTTGACTGCACCGATATAATTTTGCAACTCGTGTATTGAATATAAATGT
TTTATCGAAAAAAATTTCTATCAATTTCTTTCGTGTTGAAACTGGAAGTA
TTTAAGTGACTTCCCACTTCTGAAGAAAATGAGACTTTTATCAAACGATT
AAGTGAGAGTTAAAGAACGTTTACAAGCTTCTTAGTAAAACAAATTATGG
ACACAAAGAAGTATGGTAATGAGCGTGAATCAGGTTAGAAGATAAAAGAA
TCTCCGCCTTTACAACTTTACGAATCAGAGTGGTTTAGGTTTATTGATTT
TAGTTGGCCTTATATGAAGTTTATCTTCAATTTCCAAAGACCCGTTAACG
CAACTTCTAAAATCCTTTCTTTGTTTTCAGGTCGAGAATAACAACAATTT
AATCCAATGGGCGTCGTGTGTCGCAGTGATTTACTCTATCTCAGATAAAA
ACAGTTTCAATGTTGCATCTGCACTCCTCGAAGAAATCAACTTCATTTAC
AACAGTAAAAATTACAAACAAAATGGACCAAAAAGTATCGGCCTTATTGG
TAACAAGAAAGACTTGAACCATCTACGGGAAGTTTCCTTGAGAGAAGCTA
AAGAATTGGCGAATAAACATGGCGCGAATTTCTGGGAAGTCTCCGCTTCT
GACGATTTTCATTCAACTCATGCACCTTTAAACTCCATGGTTGTTGAAGC
TTATTTGAATAATTTGACATTGAAAGCTGCAAAAGGGGGACTGGTTTCTC
CTGGATCACATGTGAAAGGTCTCGATGAAAACGTCAGAAACGAATTAATC
TCGAATCAATCAATTGAAAGCGATGAAGGTGGCTTACAACCATCTACACC
ATTCAAAATTCCCATGAACCCTTTCGACTTTTCAAGCGAGAAACGAAAAT
CGTTTAAAGATCGCAAGAAATTAGATTTGAAGTTGAATCAACTAAAAAGT
GAAAGTCTAAAGAAGATCTCAATGGGAAGGACTTCTTTGGATAACGACAA
CTTTGACTCCAATAACAATACAAATAGTAATTCACCAGATACTATGAGTC
TGAGCACTGATAATGACGAACCAATTCGGACAAGTAGTTGGTCAAAGAAG
GACAAAAAACGATACGCTGGTCGAAAGGAGAAATCGAAAGAATCAAAAGA
ACTGAAGGAACTTAAAGAAGTGAAATTAACAGAAATGAATGGAGTTGGAC
ACGAAGAAATAGAACAAAAGAAAAGTAATTTACAAAGATGTCACAGTCTC
ACTGACCTCAAAAGTTTAGAAAAAGAACACCATTGCGAGGGAGTTGATTC
AGAAAACAAGGAAGACATTGAACCTCACGATGTAGAGGATGACAAACTAA
CTGATTTGATTTCACCTTCCAGTAAAATTACCAGCAGTTTCAGCAGGTTG
TCTTCATACTCTGCAGGCTCTGGCGTCCCCATTAAAAGTCCACGACCCCG
CAAAGAGCGACGCAAAACCACTGGCTTGACAATGACTCCCGAACACATAG
AAACAGATCTTGCTTCACCCCGAAGCCCCGAACCTCCCCGAGAACAATCC
AGATTCAAACGAACCGAA Coding sequence (CDS) from alignment at sc0000248_pilon:249447..252464- >XLOC_042885 ID=XLOC_042885|Name=XLOC_042885|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2820bp|location=Sequence derived from alignment at sc0000248_pilon:249447..252464- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGGAAGACACTAGACAAAGGACGAAGAGTGGAGCCAAACCCGATGT
CCGCCTTGCTTTGATTGGCGCACCAAAAGTCGGGAAATCAGATGAAGGAA
GACACTAGACAAAGGACGAAGAGTGGAGCCAAACCCGATGTCCGCCTTGC
TTTGATTGGCGCACCAAAAGTCGGGAAATCAGCAATCAGTGTTCGATTTC
TGACACGAAGATTCATCCACGAATACCAGAGAAGCGTGGAACATACTTAT
CGTAGAAACCTGGAGTTTGGGAATGAAGTCATTGAATATGTGTTAAGGGA
CTCATCAGGAACGCAATCAGTGTTCGATTTCTGACACGAAGATTCATCCA
CGAATACCAGAGAAGCGTGGAACATACTTATCGTAGAAACCTGGAGTTTG
GGAATGAAGTCATTGAATATGTGTTAAGGGACTCATCAGGAACGGTCGAG
AATAACAACAATTTAATCCAATGGGCGTCGTGTGTCGCAGTGATTTACTC
TATCTCAGATAAAAACAGTTTCAATGTTGCATCTGCACTCCTCGAAGAAA
TCAACTTCATTTACAACAGTAAAAATTACAAACAAAATGGACCAAAAAGT
ATCGGCCTTATTGGTAACAAGAAAGACTTGAACCATCTACGGGAAGTTTC
CTTGAGAGAAGCTAAAGAATTGGCGAATAAACATGGCGCGAATTTCTGGG
AAGTCTCCGCTTCTGACGATTTTCATTCAACTCATGCACCTTTAAACTCC
ATGGTTGTTGAAGCTTATTTGAATAATTTGACATTGAAAGCTGCAAAAGG
GGGACTGGTTTCTCCTGGATCACATGTGAAAGGTCTCGATGAAAACGTCA
GAAACGAATTAATCTCGAATCAATCAATTGAAAGCGATGAAGGTGGCTTA
CAACCATCTACACCATTCAAAATTCCCATGAACCCTTTCGACTTTTCAAG
CGAGAAACGAAAATCGTTTAAAGATCGCAAGAAATTAGATTTGAAGTTGA
ATCAACTAAAAAGTGAAAGTCTAAAGAAGATCTCAATGGGAAGGACTTCT
TTGGATAACGACAACTTTGACTCCAATAACAATACAAATAGTAATTCACC
AGATACTATGAGTCTGAGCACTGATAATGACGAACCAATTCGGACAAGTA
GTTGGTCAAAGAAGGACAAAAAACGATACGCTGGTCGAAAGGAGAAATCG
AAAGAATCAAAAGAACTGAAGGAACTTAAAGAAGTGAAATTAACAGAAAT
GAATGGAGTTGGACACGAAGAAATAGAACAAAAGAAAAGTAATTTACAAA
GATGTCACAGTCTCACTGACCTCAAAAGTTTAGAAAAAGAACACCATTGC
GAGGGAGTTGATTCAGAAAACAAGGAAGACATTGAACCTCACGATGTAGA
GGATGACAAACTAACTGATTTGATTTCACCTTCCAGTAAAATTACCAGCA
GTTTCAGCAGGTTGTCTTCATACTCTGCAGGCTCTGGCGTCCCCATTAAA
AGTCCACGACCCCGCAAAGAGCGACGCAAAACCACTGGCTTGACAATGAC
TCCCGAACACATAGAAACAGATCTTGCTTCACCCCGAAGCCCCGAACCTC
CCCGAGAACAATCCAGATTCAAACGAACCGAAGTCGAGAATAACAACAAT
TTAATCCAATGGGCGTCGTGTGTCGCAGTGATTTACTCTATCTCAGATAA
AAACAGTTTCAATGTTGCATCTGCACTCCTCGAAGAAATCAACTTCATTT
ACAACAGTAAAAATTACAAACAAAATGGACCAAAAAGTATCGGCCTTATT
GGTAACAAGAAAGACTTGAACCATCTACGGGAAGTTTCCTTGAGAGAAGC
TAAAGAATTGGCGAATAAACATGGCGCGAATTTCTGGGAAGTCTCCGCTT
CTGACGATTTTCATTCAACTCATGCACCTTTAAACTCCATGGTTGTTGAA
GCTTATTTGAATAATTTGACATTGAAAGCTGCAAAAGGGGGACTGGTTTC
TCCTGGATCACATGTGAAAGGTCTCGATGAAAACGTCAGAAACGAATTAA
TCTCGAATCAATCAATTGAAAGCGATGAAGGTGGCTTACAACCATCTACA
CCATTCAAAATTCCCATGAACCCTTTCGACTTTTCAAGCGAGAAACGAAA
ATCGTTTAAAGATCGCAAGAAATTAGATTTGAAGTTGAATCAACTAAAAA
GTGAAAGTCTAAAGAAGATCTCAATGGGAAGGACTTCTTTGGATAACGAC
AACTTTGACTCCAATAACAATACAAATAGTAATTCACCAGATACTATGAG
TCTGAGCACTGATAATGACGAACCAATTCGGACAAGTAGTTGGTCAAAGA
AGGACAAAAAACGATACGCTGGTCGAAAGGAGAAATCGAAAGAATCAAAA
GAACTGAAGGAACTTAAAGAAGTGAAATTAACAGAAATGAATGGAGTTGG
ACACGAAGAAATAGAACAAAAGAAAAGTAATTTACAAAGATGTCACAGTC
TCACTGACCTCAAAAGTTTAGAAAAAGAACACCATTGCGAGGGAGTTGAT
TCAGAAAACAAGGAAGACATTGAACCTCACGATGTAGAGGATGACAAACT
AACTGATTTGATTTCACCTTCCAGTAAAATTACCAGCAGTTTCAGCAGGT
TGTCTTCATACTCTGCAGGCTCTGGCGTCCCCATTAAAAGTCCACGACCC
CGCAAAGAGCGACGCAAAACCACTGGCTTGACAATGACTCCCGAACACAT
AGAAACAGATCTTGCTTCACCCCGAAGCCCCGAACCTCCCCGAGAACAAT
CCAGATTCAAACGAACCGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:249447..252464 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 952-1398:448 |
| Aaloc | 223-951:1189 |
| Aaloc | 94-222:1915 |
| Aaloc | 1-90:3019 |
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