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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000248_pilon:445204..448661- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042877 ID=XLOC_042877|Name=XLOC_042877|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3458bp|location=Sequence derived from alignment at sc0000248_pilon:445204..448661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGGCAGAAGCAGCTAAAGTTTTTGACATTTCTCAAGCAGATTTACT
GAGGTTTATTGAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGGTA
AGCTGCTCATGTTTTGCGATCCCTTGTTGTGACTATCTTACCATTGCTTG
CTTTTTGAATTCATTATATGAAGAAAAGAAAAAGAGATTCCTAAAAAACT
GTACAATTAATTTCAGACTTTAAAGTTATTTAAGCATATGATTTCCAGAA
TATTTAGGAGCTTCATATATTTAGAATCAATAATCTAAAGTCTGAAATTA
ATTGTACAGTTTTTTAGGGGTCTCTTTTTATTTTCTTCATAAGGGTCGAA
TTTCATAACATAGGCGTAGCGAGATACCCTGCAAAATTTATGACGTTTAT
GACATATTCATTATCTTTTGATATAACAAAGACAATAATTATAGTGTCGT
AAAAACCGCTCTCATCCATAAATTTTGCAGAGTATCTCGCTACGCCTATG
CATAATGTCCATGAAAAGCCAAGAAAGAGTATTTTGGTTAATGAAGGTTT
ATTCAGGTTTATTTCATTGAACATATCAACGTTTGGACGTCTGGACGTCT
ATCTTCTTTTGTGTCTTTGAAGCGAGCTTCGTTGCCGCCAGCATATTGGT
TTAAAAAATCCGACAATATTCAGTTACAATTTTATTTTTTTGAATTACTT
AGCTAAAAAGGATTGATAGAGCTGGACATTACTCGTAATTATGATAAAAT
TTGAGAATAATTCTTTTGTGAATTTAATTCACAGAAGAATTATTCTCAAA
TTTTATCATAGGATCATAAGTTTGAATTATATTTGATCAACATTTAATTT
TCAACGCTGAAATGCAGAATTTCAACTGTGTATACTTTTGAATCACTTTT
GTCACTCCAATAATTTTTTATGACTGGAAGGTATGTCAAAGTTGAGAGCC
TGAGTCATAAGAATATCATAATTTGAATATCACACTCTGTAAATTTATTC
CATACTTTTGAGTCAAAATTTAAAAATATTAGTCGGAGTTTTGACGTTGT
TAGCAAGATATTCCCATGAGGTATATCGTCATGATTTGTTGTTTCATTTT
ATGTTTTGAACGAGGCGGCAACGAAGCTAGCAGTGCTTTCTAAAAAAGAC
AAAGTAGATGGATGTCCAGTTGTTTACATGTTCATGATTTAACTAGTTTT
AATCTCTGAAGGGGGTAGTACTAGGTTTGTGAGTCACGGGTTATGTCCGA
GTCAAAAATCGAAAATCGACGCTTTGAGAGAAAATAATTTTAACATTTTC
AAAACCTTTGAAAGACTTTGATCAAAATGTCGGGCTCAGAAATTCCTAAA
ATTTGGTCAATATTTCGAAATTCATAACTAAATTTTAAGGGCATTTTCAA
ATTTTAGCCTATTTCTTCCTTAATTATTTCATTCATATTAAATTTTTTTA
GAAAATCACAAACTTATATTTTCATGGTTTTTGTCCATTTCAGTTTCGGA
GCATTCAAAGCATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTGG
CCTTGTTAACGTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGC
AGGAAGGATGGCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAA
TTTAGCCTGTGATGAAGGAGCACTAAAAGGTAAACCTCAACTTGCAGTTT
ATTGTTCAATAATTTTCTGTAGTCTGTTTCCCTTCAATTTTGACTGTGCG
GTTTTGATGAACCCTTCTTCAGATTTTATTTTATCCCCTTGAAATCATAC
GAGAAGTTGAGCTCGAAAAAAAGGAAAATTCTCGTTGAATGACTTTCGTC
AGTATTTCTACTCTAAAAAAGACAAATTTTTGTTTTACATATCTTTGCAT
CAACATCTTTCAAAATGAAAGATAACATCTCCTTCTTAACTCTTTTCTTT
GTGTCTTTTTTTATCAGATTCCATCAAAGGCACGCCAAGTTTACCACAGA
TCTCTGAGAAACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAGCGAGAC
ACTGTAGAAGAAGAAGAATTACAAAAATTACGCGTCGAAAGTTTAGACGT
CGAATCAAGTTTTTACGTTCACCGAAACCGCGTCAAAGTAAACGTTAAAC
AAGTTGAACTCTCACAAGTCGACGAGAAACTTTCACAAAATGCATACGTC
TATCTTATCATCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGAATCTGA
CCTTCGACCAGTCGCTGAGTGCAACTATTTTGATCAAGCGGCCGAATTTG
ACTGTGAAGCGGCCGAGATCACAACGCGCACACTAAAAGTGGCTGTTTAC
GCATGTGACCGATTTTCTCAACACCGATTGGTCAACGAGTACACATACAA
CCTTGGAGTTGAAGACGCGGTCGATCTTGAAGGCGGAGAAGATAAACCAA
GTGTTATTCCTGTCGCTTTGAATGAACTTTCACGCTCTCCAGATAACGAG
GTATAAACTTAAACTACATTTCCAGTTATTTTAGTCTATAAATTCTTATT
CTCAAACACTGTTTGGAAATCATAGAGCTAATGAAAATAATTGACTGTTT
TCTTCTAGACTGCAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTCA
TTGTGTTACATGCCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGGG
ACGAAATATTTCGGATGATGAAGAAGTACCATTAGGTAGGTTCAAAATTG
ACTTCCTCCTGTTTGTGTTACACATAGGCCTTTACATAAGTTACGTCACG
AACATCACTTTTTCGTGGCGTAACTTATGAAAAGGTCTATTGCTAACACT
CCAATTACATTGAAATTCTCAGTACATTCGAAAAAATAGAACCTAAATAT
CTTAACATTAGAGTTACCCTGGCAATAATAATAATCGAAAGTAAGGCCTG
CAATTCTTTTATGCATCTCGAGAAGAGCGTATTTAAGCCGAAAACAGAGG
ATTCACATTAGCTATTATTTTTTCATTGTCATCGGGAAGGAGTAAAGAAA
AGGATGTTTGATTGAATAAAAAGCTTATGCTTTAATTTTTTTTGACAAAG
ACTCAACTTTTAAACCTTTTTTGTGTGTCCTTCATTTACAGCAACCTACC
TTCGTGTCTCGCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAACG
TCGAGCGTTCGTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTCTT
CCATACACCACTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGTCA
TGACTTATGGAGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTATC
GTCGGACCTAAAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCTAT
GCTGACGTCACCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGACG
AAGCATAA Coding sequence (CDS) from alignment at sc0000248_pilon:445204..448661- >XLOC_042877 ID=XLOC_042877|Name=XLOC_042877|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2520bp|location=Sequence derived from alignment at sc0000248_pilon:445204..448661- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGGCAGAAGCAGCTAAAGTTTTTGACATTTCTCAAGCAGATTTACT
GAGGTTTATTGAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGATG
TCGGCAGAAGCAGCTAAAGTTTTTGACATTTCTCAAGCAGATTTACTGAG
GTTTATTGAGCAAAAGAAACAACCGGAAACTATAAATACGGGAGTTTCGG
AGCATTCAAAGCATGTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTG
GCCTTGTTAACGTGTGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACG
CAGGAAGGATGGCGAATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAA
ATTTAGCCTGTGATGAAGGAGCACTAAAAGTTTCGGAGCATTCAAAGCAT
GTGATTTTGATCGTTTCTATCTTTTTGTTCGTATTGGCCTTGTTAACGTG
TGGCTGCACCCTTTGTTTGTGGCTGGTCTCCAAACGCAGGAAGGATGGCG
AATACACCAAGCTAAAGGACGAGCCTGAGAAAGCAAATTTAGCCTGTGAT
GAAGGAGCACTAAAAGATTCCATCAAAGGCACGCCAAGTTTACCACAGAT
CTCTGAGAAACCAAAGCTAGATCAGTCATCTTTCCTCCCTGAGCGAGACA
CTGTAGAAGAAGAAGAATTACAAAAATTACGCGTCGAAAGTTTAGACGTC
GAATCAAGTTTTTACGTTCACCGAAACCGCGTCAAAGTAAACGTTAAACA
AGTTGAACTCTCACAAGTCGACGAGAAACTTTCACAAAATGCATACGTCT
ATCTTATCATCAACCTGTTGCCAGAGAAAATGGCTTTCTTTGAATCTGAC
CTTCGACCAGTCGCTGAGTGCAACTATTTTGATCAAGCGGCCGAATTTGA
CTGTGAAGCGGCCGAGATCACAACGCGCACACTAAAAGTGGCTGTTTACG
CATGTGACCGATTTTCTCAACACCGATTGGTCAACGAGTACACATACAAC
CTTGGAGTTGAAGACGCGGTCGATCTTGAAGGCGGAGAAGATAAACCAAG
TGTTATTCCTGTCGCTTTGAATGAACTTTCACGCTCTCCAGATAACGAGA
TTCCATCAAAGGCACGCCAAGTTTACCACAGATCTCTGAGAAACCAAAGC
TAGATCAGTCATCTTTCCTCCCTGAGCGAGACACTGTAGAAGAAGAAGAA
TTACAAAAATTACGCGTCGAAAGTTTAGACGTCGAATCAAGTTTTTACGT
TCACCGAAACCGCGTCAAAGTAAACGTTAAACAAGTTGAACTCTCACAAG
TCGACGAGAAACTTTCACAAAATGCATACGTCTATCTTATCATCAACCTG
TTGCCAGAGAAAATGGCTTTCTTTGAATCTGACCTTCGACCAGTCGCTGA
GTGCAACTATTTTGATCAAGCGGCCGAATTTGACTGTGAAGCGGCCGAGA
TCACAACGCGCACACTAAAAGTGGCTGTTTACGCATGTGACCGATTTTCT
CAACACCGATTGGTCAACGAGTACACATACAACCTTGGAGTTGAAGACGC
GGTCGATCTTGAAGGCGGAGAAGATAAACCAAGTGTTATTCCTGTCGCTT
TGAATGAACTTTCACGCTCTCCAGATAACGAGACTGCAGTCGACAGTTCA
AAAGAAGGCGAAGTGTTGTTTTCATTGTGTTACATGCCAACCTCTGGCCG
ATTGACTTTTGTCGCTCTCAAGGGACGAAATATTTCGGATGATGAAGAAG
TACCATTAGACTGCAGTCGACAGTTCAAAAGAAGGCGAAGTGTTGTTTTC
ATTGTGTTACATGCCAACCTCTGGCCGATTGACTTTTGTCGCTCTCAAGG
GACGAAATATTTCGGATGATGAAGAAGTACCATTAGCAACCTACCTTCGT
GTCTCGCTTTTGATTCTTGGTAAGAGCATGAAGACGGTTCAAACGTCGAG
CGTTCGTCGTTCAACAGCGCCTGTATACAACGAAGCCTTTGTCTTCCATA
CACCACTCGAACGCATCAAGGAGACAGACATCGTTGTTTCGGTCATGACT
TATGGAGACTCTGCTGGACAATCTAAAACATTAGGAAAAGTTATCGTCGG
ACCTAAAGCTGAAAACAACTTAGGACGAAAACACTGGGAAGCTATGCTGA
CGTCACCAAGGAAACCAGTGGCTCAATGGCATGCCTTGTCTGACGAAGCA
TAACAACCTACCTTCGTGTCTCGCTTTTGATTCTTGGTAAGAGCATGAAG
ACGGTTCAAACGTCGAGCGTTCGTCGTTCAACAGCGCCTGTATACAACGA
AGCCTTTGTCTTCCATACACCACTCGAACGCATCAAGGAGACAGACATCG
TTGTTTCGGTCATGACTTATGGAGACTCTGCTGGACAATCTAAAACATTA
GGAAAAGTTATCGTCGGACCTAAAGCTGAAAACAACTTAGGACGAAAACA
CTGGGAAGCTATGCTGACGTCACCAAGGAAACCAGTGGCTCAATGGCATG
CCTTGTCTGACGAAGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000248_pilon | genome | sc0000248_pilon:445204..448661 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 946-1260:316 |
| Aaloc | 817-942:851 |
| Aaloc | 286-816:1490 |
| Aaloc | 100-282:1964 |
| Aaloc | 1-96:3459 |
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