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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000269_pilon:106588..109832- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042849 ID=XLOC_042849|Name=XLOC_042849|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3245bp|location=Sequence derived from alignment at sc0000269_pilon:106588..109832- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAAAACAACTCTGGCTTTCTTGGCTCTCGCCATCTTTGCTGCAAC
TTGCGTCGACGCTGGTTGCCGACACCCTACTTTCCCTGAGGAATTTTTGT
GGAGCTTCAAAGGACGTATCCCCAAGATGAACTGCGTCAAGGTGATTGAA
CCATCTGATCCTAAATGGAAGAATGGGGACAACTTCTTGTGTCATGTTAG
AGAGCATGGACGAATCTGTAACACCGGGATCCGCTGGTCATACCGTGGTA
TGTAAACCCAGCTGGCACACAACGTTGTTTCAACGTTCATCTAACGTTAT
GGGGACGTTGTGAACATTAAATAAACGTTGAAAGAACGTTGTGTGCCAGC
TGCGCATGTTTATGAATTGTTTTTGTACTGTTTTTACTCAATATTTTTCT
GTCTAACTATTTCATTGAGAAAATAGGTGCACGAAGATCGTTTTAAAATG
TGATAAATACTAATCCGAATCGGGTTCATGTTAGTTAGTCCAAAATGAAC
AGAAAATGTCCTACTGTAAAATTTGGCAAAGATTTCGTCCCCGGTGGGAA
AATACCATGGAATTTCAGCCCCACTGAGAATTTGACTTTATTTTCATCCC
CATTCGAGTTCCAATGTTTGAAAATTGCACTCCAAAACCATCCCACTTGA
TTTTTTAACCTTGGAATAATCTATCCCCATTGAGATTTCAATAGGAATTT
TTATCCCCACTGAGGAAAAACTTCACTGAGGCTGTGAGACAGGGGGCGCT
GTTTTTTAATTGAAAATTCTGTCGGATGCACAATCGATACTTCTGACAGA
GTTGAATAAAAATTAGTTATGAGTTAGGTTCAAAGCTTATTATTATAAAT
AAGGACTAATGGGTTCTTTTTAATAGCGAACTTTCCAAGAATCAAACTCT
TTACAGCTTTTTTCAGTAAAGTCAAATTCAAGTCTGTCGGACGCACGCGA
TAGAAAATGGACTTCAAAATTTTTGAGGGCAAATCCTAATTCTATCGAAA
GTACTAGGCCTACAAACTTGAACTTTTGAACTGAATTAGAATTATGACTC
GTCATTTCTCCAAAAGGAAAATTGAATTACCTAAAGTTAAGGCAGAGTTT
TTATTCCTCCATAAAACAGAACAATTTTTTCTGTCGGATGCACATGTCGG
GCGCACAAAAATGATGCTTGTCAGGCAAACTTTGTATTTTAATGAAAACT
TTTGGCCTTTCAAACCTTTAAACGGTTACAATTATCAGTCCATAAAATTT
GTTTAAAGATCTCTTCCCATTACATTGTAAACTGAAGATTAAGAAAGTTG
TGCGTCCGACAGAATTTTTAGAAAAGTTGATGGAGCCAAACTCCAAGAAA
TTTTCATTGCTAGAGTCAAAAAAAAACGATTGATAGTGGATAGTTGTGTA
TTATAATACTTTATTTTCGGAATTTCTTTCGCAAATGCTCAAAAGTACTA
TCTACATCGAAATAAAAATGTGCGTCCGACAGAAAAAAGCCCGGACCTTT
AAACTGAAAAGCACTCATCAGTACAGTACCACTGTTTGCAGGAGGGACAC
TCAATCCATTCTTCACCATCACTGTACTTCTTTGAACATTGGGCACAGAT
GTTTGGACCATCAGCAGATGTTTTATGACCACAGACTACGGGATCGTCGG
CCTTCCTGTAGTATTGGGTAAAAAATGGTTGTTCGTCGGACGATAGACGA
TAAAATTCCAAGAATGCGATCCCTTGAGGATTTACTTTGTGGATCGTTAG
AGTCCCGTTTATGTATGGTGCTTCTTCGATTTCCTGGGGCTCTTCGAAAA
AATCACTTTTTGGCAGGTACACTGTAGTCACCGACTCACAGAGGCGATTT
GCATGATCGGCGAAGTCTCGTGGCGAGTTGACAACAATTCCTAACGATTT
GACCTCTCGAAAGACTTTATTTTTTATCGTTCCACCAACTCCATCCATAG
GGCCTTTGCCATGAGAGGCCTCGTTGTAGTGCCACTCTATCAGCTTATCA
GGATGCAGTTTAGGTAGCAGTGCGAATTTGAACCGCGAGCAAAATCGCGA
CGAACACCCATCACTCCACAAATACACCTTCTTCAAAGTGTATCGAAGTG
GCAGCCGTTCCTCGACACAATCGATGACCTTTGAAACGCAAGTGAATGAT
GCAATGCGTGAGTGATCGTTTGTTTCACTGAGAATTGTCAGTGGAACCTT
CTCGAGGTCAGAAGAATCGTTGTTAAGTTAAGTTTTGAGTGTATTTTGTT
GTTAATTAACTTATCTGTCGGACGCACAAATATCTTTTTTCAGATTCGCA
AAAAAAAAAGTCATTTTCCTGAAGATAATAGTTTAATAATATAATTAATA
ATAGAAAGTACCTAAAGCCTTAAACAAATTCGGGGATCCAAATATTGGTT
AAATTTAATTTTCCTCTTGTTTTAATTATATTGAACTTATCTGTCGGACG
CACAGCTAAAATGGATAGAGCTAGTACTTCCATCTCGGAAGCAAGAGCTT
CATAATTTTATCGGTTTACGATAAGACTCCCTAAAAGTTGATAGTTTACA
GGCTATCGTCAATAGTCTATACATTGTTTTTCTAAAAAAAAAAAAAATGC
TATCATAAATCTGTCGGACGCACAAAATAAAGTTTATGAAGTTGTCAAAG
TAGCTATTGAGATCTAAATAAGCTTATTTTGCTATTTTATCAAAACCTCA
TATGAAGTTTGCATAGTTTCTGCAATTGAAACGACTTTTTAACCATGCGA
GGGGGGCATTATTGCATAAAATGTTTGTGCGTCCAACAGACAGATTTTCA
ATGATCTCCTCGTTCAAATCGTTGATAAGAATACTGAAAAATAAAAATTT
TAAGCAATCTTTGTAGACACCAAACAAATTCGGTGTTAAGGAACGACTTT
AGCTCGGAAATTGCTGCATTATCTTGATTTTAAAAATTGACGTTGATGGT
TACCAATTAAAAAACAGCACCAGGGGTGTTTATTGGCTTTTATTGACCAT
TTATGAACTCTTTATTCCCATCCTTAGGTGCGATCAAGAACATGAGATGC
AGCCGTGTCAACGAACCATCAGAACCCAAAGGATACCACTGGGGAGATAA
CTTTCTGTGTGTTCCCAAGAACTCTCCATACCATTTCAAATTCTACAACT
ACAGACCCAAGATGACCAGAAACTGCGTTCAAATGACCGAGCCATCTGAC
CCAAATACATGGAAAGATAATTTCCTTTGCCTCAAAGATCTCTAA Coding sequence (CDS) from alignment at sc0000269_pilon:106588..109832- >XLOC_042849 ID=XLOC_042849|Name=XLOC_042849|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=930bp|location=Sequence derived from alignment at sc0000269_pilon:106588..109832- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCAAAACAACTCTGGCTTTCTTGGCTCTCGCCATCTTTGCTGCAAC
TTGCGTCGACGCTGGTTGCCGACACCCTACTTTCCCTGAGGAATTTTTGT
GGAGCTTCAAAGGACGTATCCCCAAGATGAACTGCGTCAAGGTGATTGAA
CCATCTGATCCTAAATGGAAGAATGGGGACAACTTCTTGTGTCATGTTAG
AGAGCATGGACGAATCTGTAACACCGGGATCCGCTGGTCATACCGTGATG
GGCAAAACAACTCTGGCTTTCTTGGCTCTCGCCATCTTTGCTGCAACTTG
CGTCGACGCTGGTTGCCGACACCCTACTTTCCCTGAGGAATTTTTGTGGA
GCTTCAAAGGACGTATCCCCAAGATGAACTGCGTCAAGGTGATTGAACCA
TCTGATCCTAAATGGAAGAATGGGGACAACTTCTTGTGTCATGTTAGAGA
GCATGGACGAATCTGTAACACCGGGATCCGCTGGTCATACCGTGGTGCGA
TCAAGAACATGAGATGCAGCCGTGTCAACGAACCATCAGAACCCAAAGGA
TACCACTGGGGAGATAACTTTCTGTGTGTTCCCAAGAACTCTCCATACCA
TTTCAAATTCTACAACTACAGACCCAAGATGACCAGAAACTGCGTTCAAA
TGACCGAGCCATCTGACCCAAATACATGGAAAGATAATTTCCTTTGCCTC
AAAGATCTCTAAGTGCGATCAAGAACATGAGATGCAGCCGTGTCAACGAA
CCATCAGAACCCAAAGGATACCACTGGGGAGATAACTTTCTGTGTGTTCC
CAAGAACTCTCCATACCATTTCAAATTCTACAACTACAGACCCAAGATGA
CCAGAAACTGCGTTCAAATGACCGAGCCATCTGACCCAAATACATGGAAA
GATAATTTCCTTTGCCTCAAAGATCTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000269_pilon | genome | sc0000269_pilon:106588..109832 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 250-465:217 |
| Aaloc | 1-246:3246 |
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