XLOC_042768 (mRNA) -

Overview
NameXLOC_042768
Unique NameXLOC_042768
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000199_pilon:13272..14126-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042768 ID=XLOC_042768|Name=XLOC_042768|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=855bp|location=Sequence derived from alignment at sc0000199_pilon:13272..14126- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATGAATGGGAAAAGCCAAATGTTCATCCATGCAAAAAAAGACTTGA GGATATACCTGAAGAGGATTTAGAACAAGATTACATAGATCTAGCAAATA GCGTGCAACGGCATACAAAATGTAGTTCAGCCTATTGTCTAAGAACTAAG AATGACAAACAGGAATGTCGTTTTAAATTTCCTTTTGAATGCTGCGAGAA AACACATTTAACCTTTGAAAAAGTAAAATTGAAGGGAGGCGGTGAAAAGT ATGTTCCAAACATTGTTCTGAAAAGAAATGATCCTAGAATGAATAGACAT CAACAGCTTCAATTACAATCATGGAGGGCTAATTGCGATATACAAATTAT CCTTGACCACAATGCTTGCTTGAATTATATTGCCAAGTATGCATCAAAAG CAGAAAAGATATCTGATGTCGCAAAAGAAGCGTTTACATCTGTCATTGGT AATCTTTCAGGAAAGGAAACTTCTGGTAATATTTTTCGAAAACTGATTAT CAAATCTGTCGGTGAAAGAGACTTTAGTGCTCAAGAAGTAATGCATCAAA TTATGTCTTTGAAACTACATTGCTCTTCATTTGATGTTGTAAGTTGCTCT CTTGAGGGATCAAGACAAATGAAAATTGACAATGATGGCGTTGAAACCAA AACCTCTTTCTTAGATGATTATGCTTCCAGATATGTTTATGAAGACAATG AGATTAGGCAAAGTAACCTCATAGATTTTGTTTCGAACTGGAAAATAAGT GCTAAAGACAAAAAGATTCAAAAGAGGAAAAAGGCAGTTGTTGTTCGTAC TTTTCCAAATTATAGTCCAAACCCAAAGAGTGACAGTTATCCTTTATTTT GTAAA

Coding sequence (CDS) from alignment at sc0000199_pilon:13272..14126-

>XLOC_042768 ID=XLOC_042768|Name=XLOC_042768|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000199_pilon:13272..14126- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATGAATGGGAAAAGCCAAATGTTCATCCATGCAAAAAAAGACTTGA
GGATATACCTGAAGAGGATTTAGAACAAGATTACATAGATCTAGCAAATA
GCGTGCAACGGCATACAAAATGTAGTTCAGCCTATTGTCTAAGAACTAAG
AATGACAAACAGGAATGTCGTTTTAAATTTCCTTTTGAATGCTGCGAGAA
AACACATTTAACCTTTGAAAAAGTAAAATTGAAGGGAGGCGGTGAAAAGT
ATGTTCCAAACATTGTTCTGAAAAGAAATGATCCTAGAATGAATAGACAT
CAACAGCTTCAATTACAATCATGGAGGGCTAATTGCGATATACAAATTAT
CCTTGACCACAATGCTTGCTTGAATTATATTGCCAAGTATGCATCAAAAG
CAGAAAAGATATCTGATGTCGCAAAAGAAGCGTTTACATCTGTCATTGGT
AATCTTTCAGGAAAGGAAACTTCTGGTAATATTTTTCGAAAACTGATTAT
CAAATCTGTCGGTGAAAGAGACTTTAGTGCTCAAGAAGTAATGCATCAAA
TTATGTCTTTGAAACTACATTGCTCTTCATTTGATGTTGTAAGTTGCTCT
CTTGAGGGATCAAGACAAATGAAAATTGACAATGATGGCGTTGAAACCAA
AACCTCTTTCTTAGATGATTATGCTTCCAGATATGTTTATGAAGACAATG
AGATTAGGCAAAGTAACCTCATAGATTTTGTTTCGAACTGGAAAATAAGT
GCTAAAGACAAAAAGATTCAAAAGAGGAAAAAGGCAGTTGTTGTTCGTAC
TTTTCCAAATTATAGTCCAAACCCAAAGAGTGACAGTTATCCTTTATTTT
GTAAAGTTGATGAATGGGAAAAGCCAAATGTTCATCCATGCAAAAAAAGA
CTTGAGGATATACCTGAAGAGGATTTAGAACAAGATTACATAGATCTAGC
AAATAGCGTGCAACGGCATACAAAATGTAGTTCAGCCTATTGTCTAAGAA
CTAAGAATGACAAACAGGAATGTCGTTTTAAATTTCCTTTTGAATGCTGC
GAGAAAACACATTTAACCTTTGAAAAAGTAAAATTGAAGGGAGGCGGTGA
AAAGTATGTTCCAAACATTGTTCTGAAAAGAAATGATCCTAGAATGAATA
GACATCAACAGCTTCAATTACAATCATGGAGGGCTAATTGCGATATACAA
ATTATCCTTGACCACAATGCTTGCTTGAATTATATTGCCAAGTATGCATC
AAAAGCAGAAAAGATATCTGATGTCGCAAAAGAAGCGTTTACATCTGTCA
TTGGTAATCTTTCAGGAAAGGAAACTTCTGGTAATATTTTTCGAAAACTG
ATTATCAAATCTGTCGGTGAAAGAGACTTTAGTGCTCAAGAAGTAATGCA
TCAAATTATGTCTTTGAAACTACATTGCTCTTCATTTGATGTTGTAAGTT
GCTCTCTTGAGGGATCAAGACAAATGAAAATTGACAATGATGGCGTTGAA
ACCAAAACCTCTTTCTTAGATGATTATGCTTCCAGATATGTTTATGAAGA
CAATGAGATTAGGCAAAGTAACCTCATAGATTTTGTTTCGAACTGGAAAA
TAAGTGCTAAAGACAAAAAGATTCAAAAGAGGAAAAAGGCAGTTGTTGTT
CGTACTTTTCCAAATTATAGTCCAAACCCAAAGAGTGACAGTTATCCTTT
ATTTTGTAAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042768XLOC_042768-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000199_pilongenomesc0000199_pilon:13272..14126 -
Properties
Property NameValue
Aaloc4-858:856