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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000082_pilon:192882..195831- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042748 ID=XLOC_042748|Name=XLOC_042748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2950bp|location=Sequence derived from alignment at sc0000082_pilon:192882..195831- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAACGTTTTGATCGTTCGTTATGGAGGCCGTACCAATCAAAACCT
TCGTTTGTTTCTGGCAGAATTGATGGGTACATTTATCCTTATGGTACGTG
GTGCAAAGCTTTCACTATCAACATCTTCACCCTTTTTAGCTACTTGTTAT
TATAGTTATATAGGTGTTATATGCTAGTACGAAAGCTGTTGGGACGAAGC
TGGAGTTTTTACAAGCTCTTATTTGATTTGGTTGGTCGTTAAGATGTAAT
AAAAGAATCTTATTACTTTTTCTAAAGAACGCGTCATCTCTATCACTTTA
AATGACCAATATGTGAAGTATCTTGTAAAAACTCCAGCTCATCCCAAGCT
GTTAGGGTTAGATGATATTAGTTTGCATTCTTGATATGCTTAATTCAAGA
TTACGTCATTTTTCCTATCGACAACACCCGAAAACACCGGAATTTGAGTG
TTACTAAAACTAGAAACTCAAGGGTCAAATTCCGGTTTTTCCAGTTGTTT
CCGTTATGAAAAATGCCATAATCTTGACCTACGCATATCGCGAATAATAA
TTTCCCTCAGTTCATCTTACCGTATCCTATACTATCTCTTAAACTTGTCT
TCTCGAAGAATTAATACAATGAAGAACCAATTCAAGCAAACTAGTTCTTA
CAATTCAGAGACCGTTCATATTAATTGTCATTTCATCTCTCATTCTAGAT
GTTCGGTATTGGAAGCGTGGCAGCTCTTGTTCTCGGTAAAGGAGCCGTCG
GTACCTTTCTGTCCGTCAATTTCGGTTGGGGTATCGGTTGCGCTCTTGGT
GTTTACTGGTCTGCCGGTATCTCCGGTAAGTTGTATTAAGGAGGTTTTTA
TTTATGTTTTAATGTTTCCCAGTATGCTTAACCCAAAGCGCAAACATGCA
TCATCACTCGAAATGTTTTCATAAATTTCTTTTTATGATAATTACCGCTT
TTGGGAACTCTTCCAACAATTCTTGAAAACTTATGTCTCGTTATTTTGTC
TAAACAATGGGTTGTGGAAGACTCTTTCAGTGTTGCGTATCATAAATTTA
TCTTTGAGGTGTCAAAGACTTTTTCTAAAGCTTTTTAAATGCTTCTTACT
TTTGCAGGTGGTCATATCAACCCAGCAGTGACATTGGCCATGTGTGTTTG
CGGCCGGTTACCATGGAAACAATTACCAGTTTATTGGGCTGCTCAATTTC
TTGGGTCGTTCATTGCTTCTGCTCTCTGTTTCGCTATTTATAAAGGTATG
TACGACGAGTCTAAAAGTGCTGCCAGTTATTTAATTATAAAGGAAGGTCA
CTCCCAATATGTCATTACAAATTGTTTAATATCCCTATGCTAATGAGGCC
CCAAGCGGTGCCCCTCATCGCACAAACATTCCCGTTCTCACCACGTTGAT
ACAGGGGTGTGGAGTCTCATCCATGCTCCCATCTTTATTGTTATTGGAAG
AAATCTTCATCTCGCTTATCATAACTCAAATATCCCCCTTTTGTGTTGAC
GATATTTTCCTTTTCTTTTAGACCTGATCTATGCATACGAAACACAATTG
ACTTTGAAAACCGCCGGAATTTTTTCCACTTATCCATTTGCAAATGTTTC
ACACGGAACTGCTTTTGGTGATCAGGTAATTTGATTAATCTCACATCCCA
TTATAATTTTTAGTACCTTACGCTGCTGACTAACCCTAAGGTCTAAATAT
TCCAACACTCGATGGTTTTTTTCTCAAAGAGAGGACAAAATAGTTATCGC
TGTGTAGATTAACTTCTCAACAATTTTCAGTCTCTAAATAAGAGAAAATA
AACCTCAAACGTGGGAGTGTTTTTGTCGAAAAATTGTAAGATATCATTGC
ACTGAAGTGATAATGCTTAAAGAAGGTTTCCACTCCCCTTCAAAGACCCA
AATGTCTCTAATGTGGAATAGAGTTTTGGCGGGAATTTGTCGTTGAAAAT
GAGTTTTGGCGGGAAATTCACTACCATTCCTCCCAAACCGACGGAGCCAC
TAAGGCTCGATATGTGTAATGTTTTTATTTTGAATTTACTATCTCTTTAT
TGAATAGGTCGTAGGAACGATGTTATTGGTTGGCACAGTTTGCGCATTGA
CCGATAAACGGAACTCGCCACCTAGCGGCGGAACTCTCCCCTTGATCGTC
GGACTGGTTGTTTTCGTAATCGGAATCAGTTTCGGAATCAATTGTGGATA
CGGAATCAACCCGGCGAGAGATTTAATTCCGAGGATTTTCACGGCTATCG
CTGGGTGGGGCAGTGAACCTTTCACGTAAGATATTTTGTATTACCCACTT
TCGCTCTCTTAAACTAAAACTGAAAGTATCACCGTTAGGGTTTTAAGTTT
TTAACGAAGAAAATATCTCCCTTTTTACCTTGAATGAATCAGTCACTGAG
TTAGTTAAAACTTTACTTGTTATTCAAACGCAAAAGACTTTTGTTTCAAC
AATGACTATAGTTATTGCGGTAAATTGTTGCACGTGATGATTCTTTTGTT
CTTCATTTTCATTTTCAGTTTTTTTTGTATTTTTTGTTTTAATAATATTC
CACTTTTGATTATATTATCAACGAGCACAAAACCTCTATTTCGAATTATA
TCAAAAGTTACAGCCATTCTTGTCTCCGCTGCAAATTATATCGAGGCAGA
CTTTAGTTTGAATTATATCAAAAGGTACAACGCTTCTGTCTCCGAGTTTA
GACTTCAGACTTTATTTTTCCCATTTTGTAAAATTAAATGTTTAAAGTCC
TTTGAATTTTTGATTCATTTATTTATTTTAGTACGGCTGACCACTGGTTT
TGGATCCCAATCGTTGGACAATTCCTTGGTGGTGCGATTGGGGCTTTATT
GTACATCTTGACCATTGAGATGCACCACCCAAACCAACACAAACCTTCCT
TGCTGAAAAGTGAAAGTGTTCCAACTGACTATGAAAAATCTGCCGTGTAG
Coding sequence (CDS) from alignment at sc0000082_pilon:192882..195831- >XLOC_042748 ID=XLOC_042748|Name=XLOC_042748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000082_pilon:192882..195831- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACAACGTTTTGATCGTTCGTTATGGAGGCCGTACCAATCAAAACCT
TCGTTTGTTTCTGGCAGAATTGATGGGTACATTTATCCTTATGATGGACA
ACGTTTTGATCGTTCGTTATGGAGGCCGTACCAATCAAAACCTTCGTTTG
TTTCTGGCAGAATTGATGGGTACATTTATCCTTATGATGTTCGGTATTGG
AAGCGTGGCAGCTCTTGTTCTCGGTAAAGGAGCCGTCGGTACCTTTCTGT
CCGTCAATTTCGGTTGGGGTATCGGTTGCGCTCTTGGTGTTTACTGGTCT
GCCGGTATCTCCGATGTTCGGTATTGGAAGCGTGGCAGCTCTTGTTCTCG
GTAAAGGAGCCGTCGGTACCTTTCTGTCCGTCAATTTCGGTTGGGGTATC
GGTTGCGCTCTTGGTGTTTACTGGTCTGCCGGTATCTCCGGTGGTCATAT
CAACCCAGCAGTGACATTGGCCATGTGTGTTTGCGGCCGGTTACCATGGA
AACAATTACCAGTTTATTGGGCTGCTCAATTTCTTGGGTCGTTCATTGCT
TCTGCTCTCTGTTTCGCTATTTATAAAGGTGGTCATATCAACCCAGCAGT
GACATTGGCCATGTGTGTTTGCGGCCGGTTACCATGGAAACAATTACCAG
TTTATTGGGCTGCTCAATTTCTTGGGTCGTTCATTGCTTCTGCTCTCTGT
TTCGCTATTTATAAAGACCTGATCTATGCATACGAAACACAATTGACTTT
GAAAACCGCCGGAATTTTTTCCACTTATCCATTTGCAAATGTTTCACACG
GAACTGCTTTTGGTGATCAGACCTGATCTATGCATACGAAACACAATTGA
CTTTGAAAACCGCCGGAATTTTTTCCACTTATCCATTTGCAAATGTTTCA
CACGGAACTGCTTTTGGTGATCAGGTCGTAGGAACGATGTTATTGGTTGG
CACAGTTTGCGCATTGACCGATAAACGGAACTCGCCACCTAGCGGCGGAA
CTCTCCCCTTGATCGTCGGACTGGTTGTTTTCGTAATCGGAATCAGTTTC
GGAATCAATTGTGGATACGGAATCAACCCGGCGAGAGATTTAATTCCGAG
GATTTTCACGGCTATCGCTGGGTGGGGCAGTGAACCTTTCACGTCGTAGG
AACGATGTTATTGGTTGGCACAGTTTGCGCATTGACCGATAAACGGAACT
CGCCACCTAGCGGCGGAACTCTCCCCTTGATCGTCGGACTGGTTGTTTTC
GTAATCGGAATCAGTTTCGGAATCAATTGTGGATACGGAATCAACCCGGC
GAGAGATTTAATTCCGAGGATTTTCACGGCTATCGCTGGGTGGGGCAGTG
AACCTTTCACTACGGCTGACCACTGGTTTTGGATCCCAATCGTTGGACAA
TTCCTTGGTGGTGCGATTGGGGCTTTATTGTACATCTTGACCATTGAGAT
GCACCACCCAAACCAACACAAACCTTCCTTGCTGAAAAGTGAAAGTGTTC
CAACTGACTATGAAAAATCTGCCGTGTAGTACGGCTGACCACTGGTTTTG
GATCCCAATCGTTGGACAATTCCTTGGTGGTGCGATTGGGGCTTTATTGT
ACATCTTGACCATTGAGATGCACCACCCAAACCAACACAAACCTTCCTTG
CTGAAAAGTGAAAGTGTTCCAACTGACTATGAAAAATCTGCCGTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000082_pilon | genome | sc0000082_pilon:192882..195831 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 682-849:169 |
| Aaloc | 463-678:894 |
| Aaloc | 361-462:1428 |
| Aaloc | 223-357:1842 |
| Aaloc | 94-219:2253 |
| Aaloc | 1-93:2951 |
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