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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000108_pilon:1071279..1073456+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042737 ID=XLOC_042737|Name=XLOC_042737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2178bp|location=Sequence derived from alignment at sc0000108_pilon:1071279..1073456+ (Clytia hemisphaerica_ch_hm2_pilon)
GACACAACAAAGACACATTGGAATTTGCCAGACCCTGTTTCCATCTTCTT
TGGACgagaaaatttgattaaatcCATTCACTTGAAACTTCAACAAAATC
AAGCAATTGCTTTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACTGCT
GCAAAGTTCGTTCAAATACACAAGGATGAATATCAGAAGATATTTTGGAT
TTCTGCTGTCAGCCTCAAGAAATCTTTGAACGAGATTTTGTGTGCATTTG
GCTGTAAACAACTAATACCTGATGAACCTTCGATGGAAACTCTGACTTTC
ATTTTCCTCTCTAAGATTTGTGAAGGCTCCAAAAAATCGCTGGTTTTATT
GGATGACGTCACTGAGGTCACAAAAGACGTCACTTCTTTCATTCGaaatg
tgaaagaaaaaatcaacttaTTGTTGACATCCCAATTGAAAGATTGGGAA
GATTATGGTTTGTTTCAAATTGCTGTTCCATGTTTCCATGAACAAGAATC
CATTGGCTTCTTACAGAATGAACTTTCTTCAGCCAACCAACATGAAATCT
CCATTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCC
ATTTGTTACATCAAAAAACATAAAGTTCCTCTACAAAAATACATCAAACA
ATTTGAAGCAtgcagaaaaagtgttttgggAATGAAAATTAATTCCTTTA
CTGAATATGACAAAACATTGTTGACAGTTTGGGATATGGCTTTCGCGAAG
ATTCGGGTCGAATCAAAGAATGCTATTTTGATCTTGGGAATGATGGCTTT
CATGGACAATtgcaaaatcaacaaaaagacATTCAGTTATTTTGATAAAG
TTAGCGAATTTGAATTAAATGAAATTATCAATCTGCTTTGTCAATATTCA
TTGGTCAACGAGCGGAACGAATGTTTAGAAATTCACAGTCTTGTGCAAAA
AGTTATCCGATATCGTATTGAACAAAAACAATTTGTCGAGGATGAATGTC
CGTTGACACTTCTTGAAGGTGTGCTTTTGAAAATCGAGTCTTCTCTTGAA
GATTTGGTTGCAAATGATGACTCCCAGGATTTATGGTACATTCATGTTTT
TCGTTTGATCATGAGTGGTGCACTAAAAACTTTCAACTTTGATATTAACC
TGGTGTTAAATATCGCCACAGGCAGAATGGAGTTGGAAAACTTATACCTA
CTTGCTGAacttctttcaaaagttttgttaaAACAATATCGGTTGTTTCG
AGATGTGAAAACTTTTTATACGTTGTTGCTTGTTCATCATCGTTTCATAA
ACGCGTCAAGTCAATTAGGTTTACTTAATTTGAATgagatttttgctttt
gaaaaagAGTTTTCCTCAGAGCTGGAAGAAAATTCTGTAGATGTGTACTG
GTGGAAGCTAGAGCAAGCTGAGGCATATAATATACATGGACAAATGTCGT
TATACGAAGATATCGTTCGAAATTTATTCAATGAACTGGTCAAGAAGAAA
GGATTAAATgatattaaattaagtttggcGAGGCTTTTACCAGTAAGGGG
GGATGTTGAAGTTTTGTTGAATTCCGTTGACACAAATAATCTCAGTGACG
CTGACTTTTTGGTGTATTATAATGCAAAATGTTCTTTATACATCAGGAAC
GGTTGCTTTGATTTGGCCGAACAAGTCCTGAAGGATTGGAAAGAACACAT
ACACAGAAAACCATTTTCTCGATTGTTTCACTTAAACTTCACAAAAAAGA
ATTGCTTTTTACTTTACAAAAAAGGAAATTACAATGAAGCACTACTTGCT
TGTGATGAACTTAAACGAGACATTGTCTTTACTAATGCTgatgttttcat
tttcgaaGCCTTGATCTtgatcaaattaaaaaagttcAACGACGCAGAAC
TGCTACTTGATGACTTTAATCAACGTAATAATGCACTTATCATTGAAATC
AGTTCATACCTGAAATTTCGAAATCACGACTTTGAGGCAGTAGAAAATCT
CCTCACAAATGTGGAAGATGAGCGTCagtcaaatcttttgtttttggtAA
AGGAATATGCGAAACTGCATCGACAACTCGAAAATAATAAATCGAGAGAA
TTGGTTGAACGATgtttacaaataaaaaaaattgtaaataaattCTTTCA
AGTACATTTCGATTCGATTGGTTTTTGA Coding sequence (CDS) from alignment at sc0000108_pilon:1071279..1073456+ >XLOC_042737 ID=XLOC_042737|Name=XLOC_042737|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4356bp|location=Sequence derived from alignment at sc0000108_pilon:1071279..1073456+ (Clytia hemisphaerica_ch_hm2_pilon)
GACACAACAAAGACACATTGGAATTTGCCAGACCCTGTTTCCATCTTCTT
TGGACgagaaaatttgattaaatcCATTCACTTGAAACTTCAACAAAATC
AAGCAATTGCTTTGAGTGAAATGGGAGGTGTGGGGAAAACACAAACTGCT
GCAAAGTTCGTTCAAATACACAAGGATGAATATCAGAAGATATTTTGGAT
TTCTGCTGTCAGCCTCAAGAAATCTTTGAACGAGATTTTGTGTGCATTTG
GCTGTAAACAACTAATACCTGATGAACCTTCGATGGAAACTCTGACTTTC
ATTTTCCTCTCTAAGATTTGTGAAGGCTCCAAAAAATCGCTGGTTTTATT
GGATGACGTCACTGAGGTCACAAAAGACGTCACTTCTTTCATTCGaaatg
tgaaagaaaaaatcaacttaTTGTTGACATCCCAATTGAAAGATTGGGAA
GATTATGGTTTGTTTCAAATTGCTGTTCCATGTTTCCATGAACAAGAATC
CATTGGCTTCTTACAGAATGAACTTTCTTCAGCCAACCAACATGAAATCT
CCATTTTAGCGAATCGTTTACAATCATTACCTTTAGCCCTTCACCAAGCC
ATTTGTTACATCAAAAAACATAAAGTTCCTCTACAAAAATACATCAAACA
ATTTGAAGCAtgcagaaaaagtgttttgggAATGAAAATTAATTCCTTTA
CTGAATATGACAAAACATTGTTGACAGTTTGGGATATGGCTTTCGCGAAG
ATTCGGGTCGAATCAAAGAATGCTATTTTGATCTTGGGAATGATGGCTTT
CATGGACAATtgcaaaatcaacaaaaagacATTCAGTTATTTTGATAAAG
TTAGCGAATTTGAATTAAATGAAATTATCAATCTGCTTTGTCAATATTCA
TTGGTCAACGAGCGGAACGAATGTTTAGAAATTCACAGTCTTGTGCAAAA
AGTTATCCGATATCGTATTGAACAAAAACAATTTGTCGAGGATGAATGTC
CGTTGACACTTCTTGAAGGTGTGCTTTTGAAAATCGAGTCTTCTCTTGAA
GATTTGGTTGCAAATGATGACTCCCAGGATTTATGGTACATTCATGTTTT
TCGTTTGATCATGAGTGGTGCACTAAAAACTTTCAACTTTGATATTAACC
TGGTGTTAAATATCGCCACAGGCAGAATGGAGTTGGAAAACTTATACCTA
CTTGCTGAacttctttcaaaagttttgttaaAACAATATCGGTTGTTTCG
AGATGTGAAAACTTTTTATACGTTGTTGCTTGTTCATCATCGTTTCATAA
ACGCGTCAAGTCAATTAGGTTTACTTAATTTGAATgagatttttgctttt
gaaaaagAGTTTTCCTCAGAGCTGGAAGAAAATTCTGTAGATGTGTACTG
GTGGAAGCTAGAGCAAGCTGAGGCATATAATATACATGGACAAATGTCGT
TATACGAAGATATCGTTCGAAATTTATTCAATGAACTGGTCAAGAAGAAA
GGATTAAATgatattaaattaagtttggcGAGGCTTTTACCAGTAAGGGG
GGATGTTGAAGTTTTGTTGAATTCCGTTGACACAAATAATCTCAGTGACG
CTGACTTTTTGGTGTATTATAATGCAAAATGTTCTTTATACATCAGGAAC
GGTTGCTTTGATTTGGCCGAACAAGTCCTGAAGGATTGGAAAGAACACAT
ACACAGAAAACCATTTTCTCGATTGTTTCACTTAAACTTCACAAAAAAGA
ATTGCTTTTTACTTTACAAAAAAGGAAATTACAATGAAGCACTACTTGCT
TGTGATGAACTTAAACGAGACATTGTCTTTACTAATGCTgatgttttcat
tttcgaaGCCTTGATCTtgatcaaattaaaaaagttcAACGACGCAGAAC
TGCTACTTGATGACTTTAATCAACGTAATAATGCACTTATCATTGAAATC
AGTTCATACCTGAAATTTCGAAATCACGACTTTGAGGCAGTAGAAAATCT
CCTCACAAATGTGGAAGATGAGCGTCagtcaaatcttttgtttttggtAA
AGGAATATGCGAAACTGCATCGACAACTCGAAAATAATAAATCGAGAGAA
TTGGTTGAACGATgtttacaaataaaaaaaattgtaaataaattCTTTCA
AGTACATTTCGATTCGATTGGTTTTTGAGACACAACAAAGACACATTGGA
ATTTGCCAGACCCTGTTTCCATCTTCTTTGGACgagaaaatttgattaaa
tcCATTCACTTGAAACTTCAACAAAATCAAGCAATTGCTTTGAGTGAAAT
GGGAGGTGTGGGGAAAACACAAACTGCTGCAAAGTTCGTTCAAATACACA
AGGATGAATATCAGAAGATATTTTGGATTTCTGCTGTCAGCCTCAAGAAA
TCTTTGAACGAGATTTTGTGTGCATTTGGCTGTAAACAACTAATACCTGA
TGAACCTTCGATGGAAACTCTGACTTTCATTTTCCTCTCTAAGATTTGTG
AAGGCTCCAAAAAATCGCTGGTTTTATTGGATGACGTCACTGAGGTCACA
AAAGACGTCACTTCTTTCATTCGaaatgtgaaagaaaaaatcaacttaTT
GTTGACATCCCAATTGAAAGATTGGGAAGATTATGGTTTGTTTCAAATTG
CTGTTCCATGTTTCCATGAACAAGAATCCATTGGCTTCTTACAGAATGAA
CTTTCTTCAGCCAACCAACATGAAATCTCCATTTTAGCGAATCGTTTACA
ATCATTACCTTTAGCCCTTCACCAAGCCATTTGTTACATCAAAAAACATA
AAGTTCCTCTACAAAAATACATCAAACAATTTGAAGCAtgcagaaaaagt
gttttgggAATGAAAATTAATTCCTTTACTGAATATGACAAAACATTGTT
GACAGTTTGGGATATGGCTTTCGCGAAGATTCGGGTCGAATCAAAGAATG
CTATTTTGATCTTGGGAATGATGGCTTTCATGGACAATtgcaaaatcaac
aaaaagacATTCAGTTATTTTGATAAAGTTAGCGAATTTGAATTAAATGA
AATTATCAATCTGCTTTGTCAATATTCATTGGTCAACGAGCGGAACGAAT
GTTTAGAAATTCACAGTCTTGTGCAAAAAGTTATCCGATATCGTATTGAA
CAAAAACAATTTGTCGAGGATGAATGTCCGTTGACACTTCTTGAAGGTGT
GCTTTTGAAAATCGAGTCTTCTCTTGAAGATTTGGTTGCAAATGATGACT
CCCAGGATTTATGGTACATTCATGTTTTTCGTTTGATCATGAGTGGTGCA
CTAAAAACTTTCAACTTTGATATTAACCTGGTGTTAAATATCGCCACAGG
CAGAATGGAGTTGGAAAACTTATACCTACTTGCTGAacttctttcaaaag
ttttgttaaAACAATATCGGTTGTTTCGAGATGTGAAAACTTTTTATACG
TTGTTGCTTGTTCATCATCGTTTCATAAACGCGTCAAGTCAATTAGGTTT
ACTTAATTTGAATgagatttttgcttttgaaaaagAGTTTTCCTCAGAGC
TGGAAGAAAATTCTGTAGATGTGTACTGGTGGAAGCTAGAGCAAGCTGAG
GCATATAATATACATGGACAAATGTCGTTATACGAAGATATCGTTCGAAA
TTTATTCAATGAACTGGTCAAGAAGAAAGGATTAAATgatattaaattaa
gtttggcGAGGCTTTTACCAGTAAGGGGGGATGTTGAAGTTTTGTTGAAT
TCCGTTGACACAAATAATCTCAGTGACGCTGACTTTTTGGTGTATTATAA
TGCAAAATGTTCTTTATACATCAGGAACGGTTGCTTTGATTTGGCCGAAC
AAGTCCTGAAGGATTGGAAAGAACACATACACAGAAAACCATTTTCTCGA
TTGTTTCACTTAAACTTCACAAAAAAGAATTGCTTTTTACTTTACAAAAA
AGGAAATTACAATGAAGCACTACTTGCTTGTGATGAACTTAAACGAGACA
TTGTCTTTACTAATGCTgatgttttcattttcgaaGCCTTGATCTtgatc
aaattaaaaaagttcAACGACGCAGAACTGCTACTTGATGACTTTAATCA
ACGTAATAATGCACTTATCATTGAAATCAGTTCATACCTGAAATTTCGAA
ATCACGACTTTGAGGCAGTAGAAAATCTCCTCACAAATGTGGAAGATGAG
CGTCagtcaaatcttttgtttttggtAAAGGAATATGCGAAACTGCATCG
ACAACTCGAAAATAATAAATCGAGAGAATTGGTTGAACGATgtttacaaa
taaaaaaaattgtaaataaattCTTTCAAGTACATTTCGATTCGATTGGT
TTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000108_pilon | genome | sc0000108_pilon:1071279..1073456 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2178:1 |
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