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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000072_pilon:1470048..1472749- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042728 ID=XLOC_042728|Name=XLOC_042728|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2702bp|location=Sequence derived from alignment at sc0000072_pilon:1470048..1472749- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGCTCCATGGAGGGAGACTGTCAACATGGAGAATTTCGAGGCTAG
TGAAACTATCCAAACGCAATGGTGTCAATTACTGGTGGAAGCACTACAAC
GAAAACATTACCTAGCAACCAAGTCTTTGTTACGCCTCGCTGACCTCATC
TACGGAGGTGATCGAGGCACACATCCTAGCAACGTACAAAACAATGACTT
TCACTTGTATTTTCGCAACAAAGAACTGACTGGGTCGGAGAGACAACGAA
AACATGATTCAGAAAATATTTCGCCCTACATGAGGTCTATACGTGAATCG
AAATTCTCTTACTTTATGGTCCTCGCTGTGCAAACAAACAATTTGAAAAT
CATACGATTATTGCTGACTCATCAGTTTAATATTCTTTGGCCTCACTTAC
TCGACTGTCGTTGCTGGTTATGTGAGAGTGATAAACTTGGGCAAGCGAAG
CGAAGAATAGAGACAATGCAAGCGTTATCAAATCCTTTGTGGGTCAACCT
GACTTGCAAAGATCCCTTTTTGACGAGTTTTCGGATCATCAAGACCTGCC
GGTTGTTTCGCGCACAACAAGATTGTTATGAAAAGGAGTACAATCTACTG
ACCAGACAAAATGTTAACTTTTGCACTGGCTTGTTAGACCAGGTAAGGAA
AAGCTTACACTTGAAATGATGGTGCTTTCTGATTCTGACCGGTTAGCTTC
GACATCGATATCTTCAAAGGATATTTCAATGTCGAAATTAATCATGGGTA
ATCAGCTACTTAGCTGTCTTAAGGCAGAAAACCTCAAAAGTTTTAGACCA
ACTTAAAGTCCTTTCAACCGTAAAATAGCATATCAAACCCCAATCATATT
TTGTTATTCATAAATATTTCAAAATCGGATTTCAAATGACAAAGCTGTTT
ACTATTGAAGGTAATTTCACGTTAAAGGGGAGTCCGAGTTTACCAATGTC
AAATGACGTCAAATAACTGAAGTCGTTGCATTGGCACCCTAAAGGCGGCT
TCTCAATCCTTATCGTTGAGCGGGTTTCTTAAAATGGTACTTTGATTAAA
CCACTACTCAATAGCGGTGTGAATGCATCGGAAGCCTTAGAAGTATTTTT
CCTTGGATACGTGTAATGTAAATTTAATACTGCAATGGCTTCTTTGCTTC
GATGTAGCTTAGTCCAGCGCTTATTTAAAAGTCCTTGCCTAGTATGCCTG
ATCTCAACTCTTTCGAACGTGAGGGTTAATATCCGATAAAGTCATTGCTT
GTAGACTTAATCCCAATCACCTTCAAACTTTAAGTAGGGTTAATGGAGCC
CCCCCCCCCAAGCGGATCAATTCACGCAATCACATAAATTGTTTTTCCAA
TTCACGCATTCAAGCATTTTTAAAAATCTTTCACGCATTCACGCAAACCA
CTGGGGGGGGCCTAAATAGGCGTATACTTATTCAATACTTTCCAAATTAT
TTCCCTTGTTTCATGAACAGATCCAAAACGAAAAAGAAGTGAAACACTTG
ATGAGATGGAGAGAAAGTAATTTCGAACCTTTCAAAGATATCCATCAATT
GGCCTTCATTCGATTGGGTTTCAAATACAACGTACCAGAGGTTTGTGAGT
CGTTCAATTCATTGTTTATCCACTGACCTTTATAAAGTCTGGACAAAGTT
TCTCTATCACAACCAATAAAATCTTTGATCGGAGTTTGTTTTGAGAGTGG
TACCCTAATGGTAGCACTACTCAATACTTCCTGCTATAAGTAAGCTTTTG
ATGATGTAGCGTGTTAATTTTAAAGCTAGAATTGCTTCCTTGCAGGTACC
ACTCTCAAAAAACTCCGAATAAAGATGGTCAGGTATAGCTTTGTCCAGGG
ATGTATAAAGGTCAATGGGTATGCCAACAGCAGACTCACTTTTGGAGATG
TGACAGTCAGACAGGGGTTTGAAAAACAGGAATTGTCTTACCTTTTTCTT
TCTCATTTGAAGCACACCTGGGATTACAATATTCTTGAAACAACAACCTT
CTTCCAAATACCTGAATAAGAAAAAAAAAACATTGATATATTCCACGGGA
TTTAGTTGGAATTTCACTAAAACCTGGACATAACAAACTGTAAATTTGTC
ATTGTAGTCTCCCATAGGATGACTCCACCAGAACAAAGCTCATTTGGTAG
GGCGACGGGGAAATAAAAATATAGTAGCGGCTAGAGTATTCGCGCTCGTT
AGGAACTTTGTCCTTGTAAAACACTGATTTTATACTGGATTGAGATTCAA
ATTAATTTTCATGAGAGTCTCAAGTTTGTCGATTACAAAGCTGAATTCTT
TTAGAGATAAAAATTACAATGTATAGCAATGTGCCCTCCCGGTTATTACC
ATAATGGCTTTATGGCAACTCCTGGCAACCTGGGACTTGGGCACAAGTAT
ATTTATATACGGTATTAAAATTATTAAAAAAATTGAATCTCATTTATCAG
GTGGTGGCGCATGCTGTTCCCCAACATGTCATCATGCATATCGTGAGCGA
AGGGATACCCGGATGGAAGTCCGGCGGAATCGTCTACCGGTTAATTTTCA
TCGCGTTGGTGGCTTTGTTTTATCCATTCACTGCAATCATACGAATCTTG
GCACCTGAATCTTATATAGGACGAATGGCTGTTAAACCGCTCATCAAATT
CATCAATAGTGTGGCTTCCTATATCACACTGCTTAGTGAGTCTTTCGTTC
AT Coding sequence (CDS) from alignment at sc0000072_pilon:1470048..1472749- >XLOC_042728 ID=XLOC_042728|Name=XLOC_042728|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2028bp|location=Sequence derived from alignment at sc0000072_pilon:1470048..1472749- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGACGCTCCATGGAGGGAGACTGTCAACATGGAGAATTTCGAGGCTAG
TGAAACTATCCAAACGCAATGGTGTCAATTACTGGTGGAAGCACTACAAC
GAAAACATTACCTAGCAACCAAGTCTTTGTTACGCCTCGCTGACCTCATC
TACGGAGGTGATCGAGGCACACATCCTAGCAACGTACAAAACAATGACTT
TCACTTGTATTTTCGCAACAAAGAACTGACTGGGTCGGAGAGACAACGAA
AACATGATTCAGAAAATATTTCGCCCTACATGAGGTCTATACGTGAATCG
AAATTCTCTTACTTTATGGTCCTCGCTGTGCAAACAAACAATTTGAAAAT
CATACGATTATTGCTGACTCATCAGTTTAATATTCTTTGGCCTCACTTAC
TCGACTGTCGTTGCTGGTTATGTGAGAGTGATAAACTTGGGCAAGCGAAG
CGAAGAATAGAGACAATGCAAGCGTTATCAAATCCTTTGTGGGTCAACCT
GACTTGCAAAGATCCCTTTTTGACGAGTTTTCGGATCATCAAGACCTGCC
GGTTGTTTCGCGCACAACAAGATTGTTATGAAAAGGAGTACAATCTACTG
ACCAGACAAAATGTTAACTTTTGCACTGGCTTGTTAGACCAGATGGACGC
TCCATGGAGGGAGACTGTCAACATGGAGAATTTCGAGGCTAGTGAAACTA
TCCAAACGCAATGGTGTCAATTACTGGTGGAAGCACTACAACGAAAACAT
TACCTAGCAACCAAGTCTTTGTTACGCCTCGCTGACCTCATCTACGGAGG
TGATCGAGGCACACATCCTAGCAACGTACAAAACAATGACTTTCACTTGT
ATTTTCGCAACAAAGAACTGACTGGGTCGGAGAGACAACGAAAACATGAT
TCAGAAAATATTTCGCCCTACATGAGGTCTATACGTGAATCGAAATTCTC
TTACTTTATGGTCCTCGCTGTGCAAACAAACAATTTGAAAATCATACGAT
TATTGCTGACTCATCAGTTTAATATTCTTTGGCCTCACTTACTCGACTGT
CGTTGCTGGTTATGTGAGAGTGATAAACTTGGGCAAGCGAAGCGAAGAAT
AGAGACAATGCAAGCGTTATCAAATCCTTTGTGGGTCAACCTGACTTGCA
AAGATCCCTTTTTGACGAGTTTTCGGATCATCAAGACCTGCCGGTTGTTT
CGCGCACAACAAGATTGTTATGAAAAGGAGTACAATCTACTGACCAGACA
AAATGTTAACTTTTGCACTGGCTTGTTAGACCAGATCCAAAACGAAAAAG
AAGTGAAACACTTGATGAGATGGAGAGAAAGTAATTTCGAACCTTTCAAA
GATATCCATCAATTGGCCTTCATTCGATTGGGTTTCAAATACAACGTACC
AGAGATCCAAAACGAAAAAGAAGTGAAACACTTGATGAGATGGAGAGAAA
GTAATTTCGAACCTTTCAAAGATATCCATCAATTGGCCTTCATTCGATTG
GGTTTCAAATACAACGTACCAGAGGTGGTGGCGCATGCTGTTCCCCAACA
TGTCATCATGCATATCGTGAGCGAAGGGATACCCGGATGGAAGTCCGGCG
GAATCGTCTACCGGTTAATTTTCATCGCGTTGGTGGCTTTGTTTTATCCA
TTCACTGCAATCATACGAATCTTGGCACCTGAATCTTATATAGGACGAAT
GGCTGTTAAACCGCTCATCAAATTCATCAATAGTGTGGCTTCCTATATCA
CACTGCTTAGTGAGTCTTTCGTTCATGTGGTGGCGCATGCTGTTCCCCAA
CATGTCATCATGCATATCGTGAGCGAAGGGATACCCGGATGGAAGTCCGG
CGGAATCGTCTACCGGTTAATTTTCATCGCGTTGGTGGCTTTGTTTTATC
CATTCACTGCAATCATACGAATCTTGGCACCTGAATCTTATATAGGACGA
ATGGCTGTTAAACCGCTCATCAAATTCATCAATAGTGTGGCTTCCTATAT
CACACTGCTTAGTGAGTCTTTCGTTCAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000072_pilon | genome | sc0000072_pilon:1470048..1472749 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 763-1014:253 |
| Aaloc | 643-762:1233 |
| Aaloc | 1-642:2703 |
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