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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000416_pilon:40104..43648+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042720 ID=XLOC_042720|Name=XLOC_042720|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3545bp|location=Sequence derived from alignment at sc0000416_pilon:40104..43648+ (Clytia hemisphaerica_ch_hm2_pilon)
cttttctatttgaaGGCTCAGCAAGAGAAATTATACCAAGAATATTCAGC
GAAGAAGACAAAAGAATCGAGTGACAAGTTAGAAGCTTATTATGAGCAAC
TCGTCAACAAATTACAGTCAGAAATGAAATGTATCTTTTCCAAATACAGT
GTCTGTGCTATAAGTTTTCAAGACAATTCAGAAATGTACAGGGTCTTTGC
CAATAGTGCATTTGTGTGCTTCAGTGAAAGTTTTGACAGGAATTCGAAAA
TGTAGAGAATCTTTAGATAGAGGAAATTTGGGGAAGGGCTTATCACtaga
atattttttaatgagGGATGTCTGTTTAATTCAAAACTCGAAAGACTTCT
TTGATTTGAAGACTTGAAGGTTTATGTTATAAAATATGGCAGATTGAAAC
ATATTTGAGAGTCCTTGACTAATAATCTTGCTTTGAAAAGCAATCAAAGT
TGACTTGGGTGGTAAGTGTATATAACTCTTTAGAACTTTTTAAGAATGAA
AGACTTTTCAGTATTTTCAGTATGACATACATACAAAAGATCTTTAATAG
AAATATTTCAAGGTATAGACTCGTGACTTTTTAGCGAGTTCTTGCAGTGC
ATTGTAAAATGAGATGGTTGTTaacttttcagccaaaacgaAAGATTTGG
GCGAGACAAAGCAGCGTTTCAATGAACTGAAAGAACAACATCAAGAGAAA
TCCAGACAACATCAAAAACTTCAGGTAAATTCTTCTTCCTTGTATCATAG
TCCACAAAGTCATGGGatcccccaggaagatgggggaaTCAACTTTTATC
CTGGAGAggaaaatgaatattttcacCTTAATGGGGGACTAATGCAAATG
AGGGATTTCAGGATATTTTATGGGAAGTGGGGGTAGAAATTGCAGTagat
ataatatttcaaatagGTCACTAAAATACTTTTCCAATGAGGGGAACCCC
GGAAAAAGGGTAGGTGAGGAGGAAGACCAGATGGGGGTTTTAGGCCCCAG
ATGGGGGGACCTGAAAACCTGGAGGACACCATGAAAGTGAAAAAGGGGGA
TTGAAAATTTCCCTAAAGAAAGAGGATCTCATGGAAAAGGATCAATTGAA
AAGTGGATCACTCCTCTGCGTGTAATGTGGAAAATTTTACATGTTACTTA
ACTTTAACATGAAATCGTTTTTGCagaattaagggctctgaccatagtga
atttttcataattgctgtgtttaaaatgtgttttctgactgatgtaacca
gcaaaactatggcatgttatacattttctgttagacaaactattcctgaa
tctgaaaattaaaaaattgcattgaaaaatttgatgaagaagaaaatgaa
gacttttgcgaggaagagtatttcaactttgaagagcttagtttcggcga
agaaaaaatattttgaaaaacttttcgcagtagatggtgtatctttaacc
gAACAgtaaaatttttgcggaaaatttttgtaaatgcttctttgtctcga
aatcttcaaaatagtggtttttaatcaatttttcatctggctTTTGCTTA
AAAACacaatcataacttttgacacatctttttagaaatattttccgcaa
aatttaaaatagttcaattctttgcataaagtttgaaaaaagttcgaaac
aaaaaggttaattacccattaaaactttttaGGTGATGCAACGTATTATt
tacgtctttttaaagttcataacgtcatttttgcaattaagttcttttaa
ttactcttaaggggtttgattaaaaagcaatttataaaggcaattctttg
tgttaaagaatctaaaacataacttttatgttcagatactaaaatcaatt
ttctgactatggtcagagcccttaagtgaaAGTTCTCTTCTCAGTTTTCT
AGATTTACATTTAACTTCGATCCCTCGATATTGCTACAGAAGTTATAAAT
TCATAAATGAAGTGTTCGTTTAGTGTTGGTATTtcgcttttctttttttt
ttcagataatgTATGATACACTCAGAAGGTAATCCGTTTGTAATTGTAAA
Gtgggtactcttaggttccaaataaacgaagaatattttcagctgtcaaa
gagaaggtcccttattttgctctaaatagcgtgattttagcctattttta
ccttatttttgggtttcagaagtacaatttccaaccccccctggcaatta
ggtccccccccccgtttattaaaatctagaaaattttccaacccccccgt
ttattcgaaccccccccccccccgtttatttggaacctaagagtacttcc
TCTTTGGTTTCCTTAACACGTAGAAAGTAGACCTAAATTTTGCACCGTTC
ATTATACCCTGCGATGGAAAAGATGTCCTTATCGCCTGAAAAATGCGTAT
TGGCCAAATAACCGAATTATGTCGAGTACGGGTGATATTGGAATTTCGCT
TTAAAGaatcttttcgaatttttgacaTTCATGACGTGATCCTTTTATAC
GAAAAACCCGAAAATCACCGGGCGTTTGCCATCAGTTTCATTGTTAAAAT
TCTAAACTGGTGGCACACACCCGGTGtcttttgggtgcttccgtataaaa
gattgcGTCACGAATATCAAGAATGGGTGGACCAAGATCGGGTGATTAGT
AATGATGCTTTTAATTTGCTTTTATCACGGACACTGGTGATTATTTTCCC
CTTTTTCGGACAGGCGATCAATCAATCCAGCTAGTTTGAAAGAATTTCAA
GAGAAAGGAGCACCACCTAACAATACAACCAACGAAAAATtagaacaaca
acaaaatgcAAATtccaaattctttcaaatgagTATGGGTACTAATTTCT
TGGGTAAGTAGAGATTTTCTATAAATTGCACGTCTACTTTCGTTGGAAAA
TGTTTACAGCTGAATTCTGGTTacgtaaatttaaaaaatagaaaagatcG
AAGACATAGCTCCGGGATGCTTCTACCAAAAGCACCCTACAGCTTCGAAA
ACTTCATCGCAATGAACCAGCCCTAAGCCTATCAACCGaaccaaaatttc
tttcaggATCGACGCGCAACATCCACGCATGCGTGCAAGAAGCTCACCAA
TCACTATTCGCGCCATTTCCATTTGCTGCTAAACATCCAAACGAAACTCG
TCCCAGTTCCCCTCCTACCACTGATAGTAAGAGAATTTTTGTCTCCTAAT
CTTCTCCTATTCAAAAGCTTTGGTCAATCCAGGAATTCGGGAACTAACTT
AGTGAAATAAAGTTTTTCATTCGGTTGTTTAATTGTATCTCAACACTTCA
GTTAAAAATCTATCCTTGTGATTCCATAGTTTCTTACACTGAGTATTTTT
CTCTTATTGATCCTTACAGTTGACTCTAAGCTCTGGCCCTCACAAAACCT
TCCGCATTTTGACTATGTCtactaatttatttattttctagcTGGATTTG
TGATGAAGCCTTTCCCAACACCTCAAGCCCCTCAAGAGGGAACAGATTTC
GGTCAACGCTTTACCCTACAGCTGAATACACCTCGGACCAAATAA Coding sequence (CDS) from alignment at sc0000416_pilon:40104..43648+ >XLOC_042720 ID=XLOC_042720|Name=XLOC_042720|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000416_pilon:40104..43648+ (Clytia hemisphaerica_ch_hm2_pilon)
cttttctatttgaaGGCTCAGCAAGAGAAATTATACCAAGAATATTCAGC
GAAGAAGACAAAAGAATCGAGTGACAAGTTAGAAGCTTATTATGAGCAAC
TCGTCAACAAATTACAGTCAGAAATGAAATcttttctatttgaaGGCTCA
GCAAGAGAAATTATACCAAGAATATTCAGCGAAGAAGACAAAAGAATCGA
GTGACAAGTTAGAAGCTTATTATGAGCAACTCGTCAACAAATTACAGTCA
GAAATGAAATCAATCAAAGTTGACTTGGGTGCAATCAAAGTTGACTTGGG
TGccaaaacgaAAGATTTGGGCGAGACAAAGCAGCGTTTCAATGAACTGA
AAGAACAACATCAAGAGAAATCCAGACAACATCAAAAACTTCAGccaaaa
cgaAAGATTTGGGCGAGACAAAGCAGCGTTTCAATGAACTGAAAGAACAA
CATCAAGAGAAATCCAGACAACATCAAAAACTTCAGataatgTATGATAC
ACTCAGAAGataatgTATGATACACTCAGAAGGCGATCAATCAATCCAGC
TAGTTTGAAAGAATTTCAAGAGAAAGGAGCACCACCTAACAATACAACCA
ACGAAAAATtagaacaacaacaaaatgcAAATtccaaattctttcaaatg
agTATGGGTACTAATTTCTTGGGCGATCAATCAATCCAGCTAGTTTGAAA
GAATTTCAAGAGAAAGGAGCACCACCTAACAATACAACCAACGAAAAATt
agaacaacaacaaaatgcAAATtccaaattctttcaaatgagTATGGGTA
CTAATTTCTTGGgATCGACGCGCAACATCCACGCATGCGTGCAAGAAGCT
CACCAATCACTATTCGCGCCATTTCCATTTGCTGCTAAACATCCAAACGA
AACTCGTCCCAGTTCCCCTCCTACCACTGATAgATCGACGCGCAACATCC
ACGCATGCGTGCAAGAAGCTCACCAATCACTATTCGCGCCATTTCCATTT
GCTGCTAAACATCCAAACGAAACTCGTCCCAGTTCCCCTCCTACCACTGA
TAcTGGATTTGTGATGAAGCCTTTCCCAACACCTCAAGCCCCTCAAGAGG
GAACAGATTTCGGTCAACGCTTTACCCTACAGCTGAATACACCTCGGACC
AAATAAcTGGATTTGTGATGAAGCCTTTCCCAACACCTCAAGCCCCTCAA
GAGGGAACAGATTTCGGTCAACGCTTTACCCTACAGCTGAATACACCTCG
GACCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000416_pilon | genome | sc0000416_pilon:40104..43648 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 529-630:3444 |
| Aaloc | 409-525:3059 |
| Aaloc | 268-405:2715 |
| Aaloc | 244-264:2006 |
| Aaloc | 154-243:635 |
| Aaloc | 133-150:443 |
| Aaloc | 1-129:1 |
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