XLOC_042689 (mRNA) -

Overview
NameXLOC_042689
Unique NameXLOC_042689
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000034_pilon:1411173..1411751+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042689 ID=XLOC_042689|Name=XLOC_042689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=579bp|location=Sequence derived from alignment at sc0000034_pilon:1411173..1411751+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTGTTCTTGGTCTTCCTCGTTTCGCTTCCACTTCTGGACGCATC TAGTGACATCAACCTGCTGAAATCTCAAATGCAAAAACTTCAGACTGAAG TTACCAACGAAAAAGCTGAAATCAAACAATTGAAATCAAGAGTGCAAACA CGAAATGGAATTTGTCAAATCAATTCGAATCGTTGTGGATCCTGTTTGTG CGTCGAAGATTACAGTTTAGTAAATGACGCATACTACCTCTTACCTGTAA ATTATTTCTGTGATTGCCGTGAAAAGCCTGTTAGAAGAGATTGTAAGGAA CATTATGCCCAAGGAGAGAGGATAAATGGCCTTTATCGTGTTAGTATGAA TATTATTGGCCATGTCGTTCAAGTGTCTTGTGTGCAGAATCATCATCATG GTTATGGTGGTGGTTGGACGGTAGTTCAGCGTCGCTTCGACGGATCGGAA AATTTTTATCGCTCCTGGCAAGAATATAAACACGGTTTTGGGAAACTTCA AGGGGAGCATTGGCTGGGTAATGAAAATTTATACCGTTTGACCGCACAAG CTATCGTCAGTGGCTCGGAACTGTTTGTA

Coding sequence (CDS) from alignment at sc0000034_pilon:1411173..1411751+

>XLOC_042689 ID=XLOC_042689|Name=XLOC_042689|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1158bp|location=Sequence derived from alignment at sc0000034_pilon:1411173..1411751+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCTGTTCTTGGTCTTCCTCGTTTCGCTTCCACTTCTGGACGCATC
TAGTGACATCAACCTGCTGAAATCTCAAATGCAAAAACTTCAGACTGAAG
TTACCAACGAAAAAGCTGAAATCAAACAATTGAAATCAAGAGTGCAAACA
CGAAATGGAATTTGTCAAATCAATTCGAATCGTTGTGGATCCTGTTTGTG
CGTCGAAGATTACAGTTTAGTAAATGACGCATACTACCTCTTACCTGTAA
ATTATTTCTGTGATTGCCGTGAAAAGCCTGTTAGAAGAGATTGTAAGGAA
CATTATGCCCAAGGAGAGAGGATAAATGGCCTTTATCGTGTTAGTATGAA
TATTATTGGCCATGTCGTTCAAGTGTCTTGTGTGCAGAATCATCATCATG
GTTATGGTGGTGGTTGGACGGTAGTTCAGCGTCGCTTCGACGGATCGGAA
AATTTTTATCGCTCCTGGCAAGAATATAAACACGGTTTTGGGAAACTTCA
AGGGGAGCATTGGCTGGGTAATGAAAATTTATACCGTTTGACCGCACAAG
CTATCGTCAGTGGCTCGGAACTGTTTGTAATGAAGCTGTTCTTGGTCTTC
CTCGTTTCGCTTCCACTTCTGGACGCATCTAGTGACATCAACCTGCTGAA
ATCTCAAATGCAAAAACTTCAGACTGAAGTTACCAACGAAAAAGCTGAAA
TCAAACAATTGAAATCAAGAGTGCAAACACGAAATGGAATTTGTCAAATC
AATTCGAATCGTTGTGGATCCTGTTTGTGCGTCGAAGATTACAGTTTAGT
AAATGACGCATACTACCTCTTACCTGTAAATTATTTCTGTGATTGCCGTG
AAAAGCCTGTTAGAAGAGATTGTAAGGAACATTATGCCCAAGGAGAGAGG
ATAAATGGCCTTTATCGTGTTAGTATGAATATTATTGGCCATGTCGTTCA
AGTGTCTTGTGTGCAGAATCATCATCATGGTTATGGTGGTGGTTGGACGG
TAGTTCAGCGTCGCTTCGACGGATCGGAAAATTTTTATCGCTCCTGGCAA
GAATATAAACACGGTTTTGGGAAACTTCAAGGGGAGCATTGGCTGGGTAA
TGAAAATTTATACCGTTTGACCGCACAAGCTATCGTCAGTGGCTCGGAAC
TGTTTGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042689XLOC_042689-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000034_pilongenomesc0000034_pilon:1411173..1411751 +
Properties
Property NameValue
Aaloc403-576:406
Aaloc1-402:1