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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000034_pilon:1249222..1251025+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042677 ID=XLOC_042677|Name=XLOC_042677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1804bp|location=Sequence derived from alignment at sc0000034_pilon:1249222..1251025+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCATTAGCTTAGCCTTCATCAATGGCAATTCTGTCCCAGAGAAACG
AAGTGGTCATGTTGCAGTCTTTCATAAAGGTCTATTGATAGTTTTCGGAG
GTTATGGGGATAACCGTGATGATGCATCTGATGAATTCTTATACTTCAAA
TCAATATGGTGTTACAGCGTGGAAGCTTCACAATGGACAAGACATAACTC
TAAAGGTAAACACAGGGTTCGAATTATTAATTTTGAGAGCTTTGCAATTT
TTCCGAGCGAATTGAGGTaaaaaaaGTTAGCACCGCAGGCAAAATTCTTT
TTACTGTTTGCGaagcatttttagtattttgcgatgttgtttggaagaaa
atgcaAAAGTATATTCAATGCATTTCTCAAGAAAAGCGAAGTAAGAGATT
GTAGACGAAGCAAACTTTAGTGAGTTGATAAAGCAGTAGATAAACGCATT
TTTGTGCTAGGAAATCTTTTTGGGATTCAGAATTTTCATTGGGATTACAg
ctattaaaattttaaatcttttttcactaAACTATGAACGTTGGTTTGTA
TGTttatattttattctttttggaGCATCTTTTTTAATAATCATTCAACT
GTCATTTatattaacaaaatttcaattaaCTTCCCATTGTAATTCTCACC
TTGCTTTAAAAATGAACTTTCTTGACCATTTAATCTGATTTACTGTAATT
AAAACTTTCCATTAAATATatcttcttattttttatattttttatgatat
ataACCCGATTCccatgaaatatttttaggtaCACTTCCGGAGAAGAATA
CTGGGGCTTGTGCTGCAGTGATTGGGaaagaactttttttgtttggaggA
TATCTACAAAGTAGAGGTCATTCGAACCAGCTAAGTTCTCTTGATTTAAC
AACATTCACTTGGAAAGACCTTAACGATAGGACAACAGGAGTAACTCCCT
CTTCAAGAGATAAGTTTGGTTGTTGGATTGATGGTcagaatattatttat
tttggtGGGTTTGGGCACCCACCTGAAAATTGGAGTAAGGTGAAGggtga
tttttgttttgaagaatttcCACTTGCATGGTCACATGGCACTGGATGGA
ATAACCATTTGCATATTTTGGATACTTCGTTACTGATATGGTCTCAACCT
AAAGGCTCTGGATCAGTACCATCACCAAGAGCTGCCTTTTCAACCACACA
GAttggaagaaaatgttttttatttggtGGAAGGTTTAAGGAGCACCGTC
GCAATGATTTATATGTACTGGATTCTAAGTCATTTCATTGGACACAGTTA
GAGCCAATTGGTGACTCACCATCAGGTCGCTCATGGCATGTTATGGAAAA
TGTGAGTCATAATCACTTGTTTATTTACGGTGGATTTGATAACGAAGGAA
ATGCACTTAAGGATACTTGGATTTACAATATTTCACAAAACACGTGGTCG
GAATTGAAAACAGCATCAAAGAACTTGGATATCTTTGCACCTAGAATGTG
GCACACTGCATGCAAAACAGATTCTCCTGGAGAGGTATTGATTTTTGGCG
GCTGTATAAATTCAATAGTTGATGTGGTTGATCGAGCTAAGCATACTAAT
ACAGTTTCTGTTTTTCGCTTCTCACCTTTAAGCTTGCGTAGACAATGCTT
GGATTTCATTATGTCAAATATTGTGAAATACTCTGGATCTGTGATGGAGC
TTCCTCAGTCTTTACGGAGAGATATCAGACATAGAAGCCTAGCTTTAGGT
TTGCGATCACCAAATGGTCATGGAAAACTTATAAGTAATTGTCAAATGAT
GTGA Coding sequence (CDS) from alignment at sc0000034_pilon:1249222..1251025+ >XLOC_042677 ID=XLOC_042677|Name=XLOC_042677|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2460bp|location=Sequence derived from alignment at sc0000034_pilon:1249222..1251025+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGCATTAGCTTAGCCTTCATCAATGGCAATTCTGTCCCAGAGAAACG
AAGTGGTCATGTTGCAGTCTTTCATAAAGGTCTATTGATAGTTTTCGGAG
GTTATGGGGATAACCGTGATGATGCATCTGATGAATTCTTATACTTCAAA
TCAATATGGTGTTACAGCGTGGAAGCTTCACAATGGACAAGACATAACTC
TAAAGATGAGCATTAGCTTAGCCTTCATCAATGGCAATTCTGTCCCAGAG
AAACGAAGTGGTCATGTTGCAGTCTTTCATAAAGGTCTATTGATAGTTTT
CGGAGGTTATGGGGATAACCGTGATGATGCATCTGATGAATTCTTATACT
TCAAATCAATATGGTGTTACAGCGTGGAAGCTTCACAATGGACAAGACAT
AACTCTAAAGgtaCACTTCCGGAGAAGAATACTGGGGCTTGTGCTGCAGT
GATTGGGaaagaactttttttgtttggaggATATCTACAAAGTAGAGGTC
ATTCGAACCAGCTAAGTTCTCTTGATTTAACAACATTCACTTGGAAAGAC
CTTAACGATAGGACAACAGGAGTAACTCCCTCTTCAAGAGATAAGTTTGG
TTGTTGGATTGATGGTcagaatattatttattttggtGGGTTTGGGCACC
CACCTGAAAATTGGAGTAAGGTGAAGggtgatttttgttttgaagaattt
cCACTTGCATGGTCACATGGCACTGGATGGAATAACCATTTGCATATTTT
GGATACTTCGTTACTGATATGGTCTCAACCTAAAGGCTCTGGATCAGTAC
CATCACCAAGAGCTGCCTTTTCAACCACACAGAttggaagaaaatgtttt
ttatttggtGGAAGGTTTAAGGAGCACCGTCGCAATGATTTATATGTACT
GGATTCTAAGTCATTTCATTGGACACAGTTAGAGCCAATTGGTGACTCAC
CATCAGGTCGCTCATGGCATGTTATGGAAAATGTGAGTCATAATCACTTG
TTTATTTACGGTGGATTTGATAACGAAGGAAATGCACTTAAGGATACTTG
GATTTACAATATTTCACAAAACACGTGGTCGGAATTGAAAACAGCATCAA
AGAACTTGGATATCTTTGCACCTAGAATGTGGCACACTGCATGCAAAACA
GATTCTCCTGGAGAGGTATTGATTTTTGGCGGCTGTATAAATTCAATAGT
TGATGTGGTTGATCGAGCTAAGCATACTAATACAGTTTCTGTTTTTCGCT
TCTCACCTTTAAGCTTGCGTAGACAATGCTTGGATTTCATTATGTCAAAT
ATTGTGAAATACTCTGGATCTGTGATGGAGCTTCCTCAGTCTTTACGGAG
AGATATCAGACATAGAAGCCTAGCTTTAGGTTTGCGATCACCAAATGGTC
ATGGAAAACTTATAAGTAATTGTCAAATGATGTGAgtaCACTTCCGGAGA
AGAATACTGGGGCTTGTGCTGCAGTGATTGGGaaagaactttttttgttt
ggaggATATCTACAAAGTAGAGGTCATTCGAACCAGCTAAGTTCTCTTGA
TTTAACAACATTCACTTGGAAAGACCTTAACGATAGGACAACAGGAGTAA
CTCCCTCTTCAAGAGATAAGTTTGGTTGTTGGATTGATGGTcagaatatt
atttattttggtGGGTTTGGGCACCCACCTGAAAATTGGAGTAAGGTGAA
GggtgatttttgttttgaagaatttcCACTTGCATGGTCACATGGCACTG
GATGGAATAACCATTTGCATATTTTGGATACTTCGTTACTGATATGGTCT
CAACCTAAAGGCTCTGGATCAGTACCATCACCAAGAGCTGCCTTTTCAAC
CACACAGAttggaagaaaatgttttttatttggtGGAAGGTTTAAGGAGC
ACCGTCGCAATGATTTATATGTACTGGATTCTAAGTCATTTCATTGGACA
CAGTTAGAGCCAATTGGTGACTCACCATCAGGTCGCTCATGGCATGTTAT
GGAAAATGTGAGTCATAATCACTTGTTTATTTACGGTGGATTTGATAACG
AAGGAAATGCACTTAAGGATACTTGGATTTACAATATTTCACAAAACACG
TGGTCGGAATTGAAAACAGCATCAAAGAACTTGGATATCTTTGCACCTAG
AATGTGGCACACTGCATGCAAAACAGATTCTCCTGGAGAGGTATTGATTT
TTGGCGGCTGTATAAATTCAATAGTTGATGTGGTTGATCGAGCTAAGCAT
ACTAATACAGTTTCTGTTTTTCGCTTCTCACCTTTAAGCTTGCGTAGACA
ATGCTTGGATTTCATTATGTCAAATATTGTGAAATACTCTGGATCTGTGA
TGGAGCTTCCTCAGTCTTTACGGAGAGATATCAGACATAGAAGCCTAGCT
TTAGGTTTGCGATCACCAAATGGTCATGGAAAACTTATAAGTAATTGTCA
AATGATGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000034_pilon | genome | sc0000034_pilon:1249222..1251025 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 208-1230:782 |
| Aaloc | 1-204:1 |
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