XLOC_042668 (mRNA) -

Overview
NameXLOC_042668
Unique NameXLOC_042668
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000034_pilon:1499404..1500240+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042668 ID=XLOC_042668|Name=XLOC_042668|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=837bp|location=Sequence derived from alignment at sc0000034_pilon:1499404..1500240+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACCACTCGCCacacaaccaaccttcgaacagcgacaacaacaaca acgacaactGTATTACAATGACCACAATGTGGAAAATAACATCCCAGCCA AACCACCACCCGATAAACTCTCATCAAACATCACCAGTCCTTCATCCACG TGTGCTTCTATTCAGCTAGATTATCCTTTTAGTTATAATatcaataataa taacaataacgcTACAAATAATACACTACCAGTCTCATCAGTAGATCACA GACAGTACTTATACGATTTAGCTATCAACGTTGATAATTATAAACCCTCA TCTGTGCAAGCAACTTCATTATTTAATACTTTATCGAATGCCAAGAGGAG CATCAATTTGAACGAAACAACGCAAAATGGTTTACATAATAAACAAAGAA CGACATGTAACATTGAGAGATCGATAAATTATAATGGTGATACttttaat gataaaattttaccaAGGAATCATAATATTCGGAATAATAAAAGCCCATC TGATAGTGACATTACCAAAAATGGGGTTCCGAACGGCCATCATGGACCTT TAAGACCTCTATCCTTAGATCTAACAGAAACGACACGTCAGATACTGCCG AGGCTATCACCGATTAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTAC GAAGCCCATGATATCGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTT CTCTGCAAATGAGGCACCATAAAATGATCTTGAACAATGACACGACTAAT GAAATCCGACAAGAGAGAGTAAgtgattttattttatgtttcCATGTGCT CCGATTATGTCAATGCTTAGCCTTACCAAGCTCTTTT

Coding sequence (CDS) from alignment at sc0000034_pilon:1499404..1500240+

>XLOC_042668 ID=XLOC_042668|Name=XLOC_042668|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1674bp|location=Sequence derived from alignment at sc0000034_pilon:1499404..1500240+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAACCACTCGCCacacaaccaaccttcgaacagcgacaacaacaaca
acgacaactGTATTACAATGACCACAATGTGGAAAATAACATCCCAGCCA
AACCACCACCCGATAAACTCTCATCAAACATCACCAGTCCTTCATCCACG
TGTGCTTCTATTCAGCTAGATTATCCTTTTAGTTATAATatcaataataa
taacaataacgcTACAAATAATACACTACCAGTCTCATCAGTAGATCACA
GACAGTACTTATACGATTTAGCTATCAACGTTGATAATTATAAACCCTCA
TCTGTGCAAGCAACTTCATTATTTAATACTTTATCGAATGCCAAGAGGAG
CATCAATTTGAACGAAACAACGCAAAATGGTTTACATAATAAACAAAGAA
CGACATGTAACATTGAGAGATCGATAAATTATAATGGTGATACttttaat
gataaaattttaccaAGGAATCATAATATTCGGAATAATAAAAGCCCATC
TGATAGTGACATTACCAAAAATGGGGTTCCGAACGGCCATCATGGACCTT
TAAGACCTCTATCCTTAGATCTAACAGAAACGACACGTCAGATACTGCCG
AGGCTATCACCGATTAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTAC
GAAGCCCATGATATCGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTT
CTCTGCAAATGAGGCACCATAAAATGATCTTGAACAATGACACGACTAAT
GAAATCCGACAAGAGAGAGTAAgtgattttattttatgtttcCATGTGCT
CCGATTATGTCAATGCTTAGCCTTACCAAGCTCTTTTATGCAACCACTCG
CCacacaaccaaccttcgaacagcgacaacaacaacaacgacaactGTAT
TACAATGACCACAATGTGGAAAATAACATCCCAGCCAAACCACCACCCGA
TAAACTCTCATCAAACATCACCAGTCCTTCATCCACGTGTGCTTCTATTC
AGCTAGATTATCCTTTTAGTTATAATatcaataataataacaataacgcT
ACAAATAATACACTACCAGTCTCATCAGTAGATCACAGACAGTACTTATA
CGATTTAGCTATCAACGTTGATAATTATAAACCCTCATCTGTGCAAGCAA
CTTCATTATTTAATACTTTATCGAATGCCAAGAGGAGCATCAATTTGAAC
GAAACAACGCAAAATGGTTTACATAATAAACAAAGAACGACATGTAACAT
TGAGAGATCGATAAATTATAATGGTGATACttttaatgataaaattttac
caAGGAATCATAATATTCGGAATAATAAAAGCCCATCTGATAGTGACATT
ACCAAAAATGGGGTTCCGAACGGCCATCATGGACCTTTAAGACCTCTATC
CTTAGATCTAACAGAAACGACACGTCAGATACTGCCGAGGCTATCACCGA
TTAGAGACTCAGACAATTTGAAGTCAGTTTTCAGTACGAAGCCCATGATA
TCGTCAAGTTTAAGTATGAATGGAAAGCAGCTTTCTTCTCTGCAAATGAG
GCACCATAAAATGATCTTGAACAATGACACGACTAATGAAATCCGACAAG
AGAGAGTAAgtgattttattttatgtttcCATGTGCTCCGATTATGTCAA
TGCTTAGCCTTACCAAGCTCTTTT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042668XLOC_042668-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000034_pilongenomesc0000034_pilon:1499404..1500240 +
Properties
Property NameValue
Aaloc37-834:40
Aaloc1-36:1