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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:439819..441456- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042646 ID=XLOC_042646|Name=XLOC_042646|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1638bp|location=Sequence derived from alignment at sc0000247_pilon:439819..441456- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCTAAAAATTTTGACAAACAAATTGAAAAATTGACAGAAAATGT
CGAAAAACAGATGATGAATCTAACGCAGAAATTATTGAGCCAGCAAAAAG
GAGTTTTTCAACGACTGGATAAACTTGAGAAACAAGCCAACAACGGCCGT
GATGACAAAGATAGTATTCGGTCGGGAGAAAGTTCTGAAACAAGTTTTAC
AAATGATCAATTTTCCAACAAGAGAAACTTCAGTATTACTCTACAAGAAG
AAGTATGTCAGCCAAGAATCATCCAAGTTAAGAGCAGAGACAATAGTGAA
GATTCTTCTGGCAAAATATCACTTGCGCCACCTGAGCAACTGACAGCTCG
GTCAAAAAAACAATCATTTCTTGAAGAGAATTGTAATATAATGGAAGAAA
AGATCAGTAGTGAGAAACAGAGTTACGCTGAGGGGTTAACCATACACGGA
GCCAATCGCATAGCAACCGGTGGTGCCGTGAGTAAAGTCATTTGGTCTAT
CCTTGTGGCATGTTCTTTGTTAACAGCTATCATGATATCTAAAGAGCATT
GGGAATCTTTCTTAAGTGATCATAGTGTATCTAATTTTGTAATTACTGTG
GAAAAAGAAATCAAACTTCCGTCGATAACCATTTGCAACTATGCCGCAAT
CAATAGAGAGAGACGTCATTTTAGTGACGGTATCCCAACCTATAAACGTC
CACTCCTAGTTAGTGATGGTAGTATGAGACTTTGTGGGCAAAATTTAACT
CAGTGTGGTTATAACGGAACTACTTTGATCAAGGTGCAGAACTATACAGC
TGATTATTCGAGTTCAAGTCTGCAGAATAATTTGGTTGATTATGATGATA
CGACAAATTGTTTTACCGTTAGAGGTTCCACACAATATGTACCGTCCGAC
ATTTTATCCGTTCAAGCGGTCGCTAATCGGACGCCGTTTGACGAATTGTG
GACTGAGCTGTATGTTCACCCAACTGAAGAGACTTTTCAAGAAGCGTCGC
CAACTGTTTATTGGGCAAGTGAAGGTTGGTATCACGTGATTTTGGATAAG
AAAATCATCACCAGATTAGGATTGCCTTTTACTGACTGCGTTGAAGGGAA
GGGTTCTTACGAACAAAACAAATTCAAAGGGAACTATACTGTGACAAAAT
GCAAGAAAGGTTGTTTTTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATT
CCGCAAATGTATAAGAAACACATGCGAGAACCACGCCGGTTTGACAACAC
AACCTTTATCAATAATACTGAGATGCAGACCTGTCTAAAAGAAGTTGAAG
GTGATTTTTCTGTCACTGAAGAGTGTAACCGTCTTTGTAAACTTCAGCCG
TGCTATGAAGAAGACATCAAATTGTCGTTGGACTATCACAAAGCTCCGAG
TTATCCAAATTTTTACGAACTAGCTTTCACTTTCCATACATTTCTTGTTG
AACATATAGAAGAAAAACCAGCGTACACTTGGCAAGATTTGTTCGCGAAT
TTCGGTGGTTGTGTTGGTTTGATGACAGGAGCATCGATTCTGTCAGCTTT
CGAGCTGATGATATTTTTTGGATTAATTGTTCTTGACTTCTTTGACTTGT
ACACCAAATGTCAAACCAAAATCCACCCAAATCCATAA Coding sequence (CDS) from alignment at sc0000247_pilon:439819..441456- >XLOC_042646 ID=XLOC_042646|Name=XLOC_042646|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3276bp|location=Sequence derived from alignment at sc0000247_pilon:439819..441456- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCTAAAAATTTTGACAAACAAATTGAAAAATTGACAGAAAATGT
CGAAAAACAGATGATGAATCTAACGCAGAAATTATTGAGCCAGCAAAAAG
GAGTTTTTCAACGACTGGATAAACTTGAGAAACAAGCCAACAACGGCCGT
GATGACAAAGATAGTATTCGGTCGGGAGAAAGTTCTGAAACAAGTTTTAC
AAATGATCAATTTTCCAACAAGAGAAACTTCAGTATTACTCTACAAGAAG
AAGTATGTCAGCCAAGAATCATCCAAGTTAAGAGCAGAGACAATAGTGAA
GATTCTTCTGGCAAAATATCACTTGCGCCACCTGAGCAACTGACAGCTCG
GTCAAAAAAACAATCATTTCTTGAAGAGAATTGTAATATAATGGAAGAAA
AGATCAGTAGTGAGAAACAGAGTTACGCTGAGGGGTTAACCATACACGGA
GCCAATCGCATAGCAACCGGTGGTGCCGTGAGTAAAGTCATTTGGTCTAT
CCTTGTGGCATGTTCTTTGTTAACAGCTATCATGATATCTAAAGAGCATT
GGGAATCTTTCTTAAGTGATCATAGTGTATCTAATTTTGTAATTACTGTG
GAAAAAGAAATCAAACTTCCGTCGATAACCATTTGCAACTATGCCGCAAT
CAATAGAGAGAGACGTCATTTTAGTGACGGTATCCCAACCTATAAACGTC
CACTCCTAGTTAGTGATGGTAGTATGAGACTTTGTGGGCAAAATTTAACT
CAGTGTGGTTATAACGGAACTACTTTGATCAAGGTGCAGAACTATACAGC
TGATTATTCGAGTTCAAGTCTGCAGAATAATTTGGTTGATTATGATGATA
CGACAAATTGTTTTACCGTTAGAGGTTCCACACAATATGTACCGTCCGAC
ATTTTATCCGTTCAAGCGGTCGCTAATCGGACGCCGTTTGACGAATTGTG
GACTGAGCTGTATGTTCACCCAACTGAAGAGACTTTTCAAGAAGCGTCGC
CAACTGTTTATTGGGCAAGTGAAGGTTGGTATCACGTGATTTTGGATAAG
AAAATCATCACCAGATTAGGATTGCCTTTTACTGACTGCGTTGAAGGGAA
GGGTTCTTACGAACAAAACAAATTCAAAGGGAACTATACTGTGACAAAAT
GCAAGAAAGGTTGTTTTTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATT
CCGCAAATGTATAAGAAACACATGCGAGAACCACGCCGGTTTGACAACAC
AACCTTTATCAATAATACTGAGATGCAGACCTGTCTAAAAGAAGTTGAAG
GTGATTTTTCTGTCACTGAAGAGTGTAACCGTCTTTGTAAACTTCAGCCG
TGCTATGAAGAAGACATCAAATTGTCGTTGGACTATCACAAAGCTCCGAG
TTATCCAAATTTTTACGAACTAGCTTTCACTTTCCATACATTTCTTGTTG
AACATATAGAAGAAAAACCAGCGTACACTTGGCAAGATTTGTTCGCGAAT
TTCGGTGGTTGTGTTGGTTTGATGACAGGAGCATCGATTCTGTCAGCTTT
CGAGCTGATGATATTTTTTGGATTAATTGTTCTTGACTTCTTTGACTTGT
ACACCAAATGTCAAACCAAAATCCACCCAAATCCATAAATGGATTCTAAA
AATTTTGACAAACAAATTGAAAAATTGACAGAAAATGTCGAAAAACAGAT
GATGAATCTAACGCAGAAATTATTGAGCCAGCAAAAAGGAGTTTTTCAAC
GACTGGATAAACTTGAGAAACAAGCCAACAACGGCCGTGATGACAAAGAT
AGTATTCGGTCGGGAGAAAGTTCTGAAACAAGTTTTACAAATGATCAATT
TTCCAACAAGAGAAACTTCAGTATTACTCTACAAGAAGAAGTATGTCAGC
CAAGAATCATCCAAGTTAAGAGCAGAGACAATAGTGAAGATTCTTCTGGC
AAAATATCACTTGCGCCACCTGAGCAACTGACAGCTCGGTCAAAAAAACA
ATCATTTCTTGAAGAGAATTGTAATATAATGGAAGAAAAGATCAGTAGTG
AGAAACAGAGTTACGCTGAGGGGTTAACCATACACGGAGCCAATCGCATA
GCAACCGGTGGTGCCGTGAGTAAAGTCATTTGGTCTATCCTTGTGGCATG
TTCTTTGTTAACAGCTATCATGATATCTAAAGAGCATTGGGAATCTTTCT
TAAGTGATCATAGTGTATCTAATTTTGTAATTACTGTGGAAAAAGAAATC
AAACTTCCGTCGATAACCATTTGCAACTATGCCGCAATCAATAGAGAGAG
ACGTCATTTTAGTGACGGTATCCCAACCTATAAACGTCCACTCCTAGTTA
GTGATGGTAGTATGAGACTTTGTGGGCAAAATTTAACTCAGTGTGGTTAT
AACGGAACTACTTTGATCAAGGTGCAGAACTATACAGCTGATTATTCGAG
TTCAAGTCTGCAGAATAATTTGGTTGATTATGATGATACGACAAATTGTT
TTACCGTTAGAGGTTCCACACAATATGTACCGTCCGACATTTTATCCGTT
CAAGCGGTCGCTAATCGGACGCCGTTTGACGAATTGTGGACTGAGCTGTA
TGTTCACCCAACTGAAGAGACTTTTCAAGAAGCGTCGCCAACTGTTTATT
GGGCAAGTGAAGGTTGGTATCACGTGATTTTGGATAAGAAAATCATCACC
AGATTAGGATTGCCTTTTACTGACTGCGTTGAAGGGAAGGGTTCTTACGA
ACAAAACAAATTCAAAGGGAACTATACTGTGACAAAATGCAAGAAAGGTT
GTTTTTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATTCCGCAAATGTAT
AAGAAACACATGCGAGAACCACGCCGGTTTGACAACACAACCTTTATCAA
TAATACTGAGATGCAGACCTGTCTAAAAGAAGTTGAAGGTGATTTTTCTG
TCACTGAAGAGTGTAACCGTCTTTGTAAACTTCAGCCGTGCTATGAAGAA
GACATCAAATTGTCGTTGGACTATCACAAAGCTCCGAGTTATCCAAATTT
TTACGAACTAGCTTTCACTTTCCATACATTTCTTGTTGAACATATAGAAG
AAAAACCAGCGTACACTTGGCAAGATTTGTTCGCGAATTTCGGTGGTTGT
GTTGGTTTGATGACAGGAGCATCGATTCTGTCAGCTTTCGAGCTGATGAT
ATTTTTTGGATTAATTGTTCTTGACTTCTTTGACTTGTACACCAAATGTC
AAACCAAAATCCACCCAAATCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:439819..441456 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1638:1639 |
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