XLOC_042641 (mRNA) -

Overview
NameXLOC_042641
Unique NameXLOC_042641
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000200_pilon:239451..239998-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042641 ID=XLOC_042641|Name=XLOC_042641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=548bp|location=Sequence derived from alignment at sc0000200_pilon:239451..239998- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAAAAGCAGAAAACAATAATTACCGAAAAAACTCAAAAAAAAGCGTA AAAATGGATAGTTCAAAAGAGATATCGAATGACAGTCGGTATATTGATCT TGGATTGCCAGCGGATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAG GCAAGAGATGGGGTTGGGTGAAGCAATGTACAATGTTTGAAGTTGATTAT GATATAGATATCAAAGAAGGAGAAAGAGACATTGGAGATCAACCCGAAAA CTGTCCCAAAAGTGCATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTG AAAAGAAGGAATCCAACAAAGGACCATCATTTGGTGCTAATCCAAAGAAA AGTGTTTTCGAAAAAGAGAAAAAGGAGCCAATTGTAGGCGATAAAACTGT CGCTTTGGGAACAAAAGATGAAGTTTATGCGACTGGTGATGCAGGGTTGC TTGGAGCTGTTTTGGAAGCATATAATCATCATTGGAATCTCAAAATTTCT CCTGATGATTTTTGGATCCCTGTTGCAATTCGTGTTGGTAGGAAAATC

Coding sequence (CDS) from alignment at sc0000200_pilon:239451..239998-

>XLOC_042641 ID=XLOC_042641|Name=XLOC_042641|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1096bp|location=Sequence derived from alignment at sc0000200_pilon:239451..239998- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAAAAGCAGAAAACAATAATTACCGAAAAAACTCAAAAAAAAGCGTA
AAAATGGATAGTTCAAAAGAGATATCGAATGACAGTCGGTATATTGATCT
TGGATTGCCAGCGGATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAG
GCAAGAGATGGGGTTGGGTGAAGCAATGTACAATGTTTGAAGTTGATTAT
GATATAGATATCAAAGAAGGAGAAAGAGACATTGGAGATCAACCCGAAAA
CTGTCCCAAAAGTGCATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTG
AAAAGAAGGAATCCAACAAAGGACCATCATTTGGTGCTAATCCAAAGAAA
AGTGTTTTCGAAAAAGAGAAAAAGGAGCCAATTGTAGGCGATAAAACTGT
CGCTTTGGGAACAAAAGATGAAGTTTATGCGACTGGTGATGCAGGGTTGC
TTGGAGCTGTTTTGGAAGCATATAATCATCATTGGAATCTCAAAATTTCT
CCTGATGATTTTTGGATCCCTGTTGCAATTCGTGTTGGTAGGAAAATCAT
AGAAAAGCAGAAAACAATAATTACCGAAAAAACTCAAAAAAAAGCGTAAA
AATGGATAGTTCAAAAGAGATATCGAATGACAGTCGGTATATTGATCTTG
GATTGCCAGCGGATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAGGC
AAGAGATGGGGTTGGGTGAAGCAATGTACAATGTTTGAAGTTGATTATGA
TATAGATATCAAAGAAGGAGAAAGAGACATTGGAGATCAACCCGAAAACT
GTCCCAAAAGTGCATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTGAA
AAGAAGGAATCCAACAAAGGACCATCATTTGGTGCTAATCCAAAGAAAAG
TGTTTTCGAAAAAGAGAAAAAGGAGCCAATTGTAGGCGATAAAACTGTCG
CTTTGGGAACAAAAGATGAAGTTTATGCGACTGGTGATGCAGGGTTGCTT
GGAGCTGTTTTGGAAGCATATAATCATCATTGGAATCTCAAAATTTCTCC
TGATGATTTTTGGATCCCTGTTGCAATTCGTGTTGGTAGGAAAATC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042641XLOC_042641-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200_pilongenomesc0000200_pilon:239451..239998 -
Properties
Property NameValue
Aaloc46-549:505
Aaloc40-42:508
Aaloc1-39:549