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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000200_pilon:117559..124080+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042640 ID=XLOC_042640|Name=XLOC_042640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6522bp|location=Sequence derived from alignment at sc0000200_pilon:117559..124080+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGACAGAAAACAATATTTAccgaaaaactcaaaaaaagcgtaaaaaTG
GATAGTTCAAAAGAGATATCGAATGACAGTCGGTATATTGATCTTGGATT
GCCAGCGGATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAGGCAAGA
GATGGGGTTGGGTGAAGCAATGTAGAATGTTTGAAGTTGATTATGATATA
GATATCAAGGAACGAGAAAGAGATATTGGGGATCAACCGGAAAACTGTCC
CAAAAGTGCATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTGAAAAGA
AGGAATCCAACAAAGGACCATCGTTTGGTGCTAATCCAAAGAAAAGTGTT
ttcgaaaaagagaaaaaggagCCAATTGTAGGGGATAAAACTGTCGCTTT
GGGAACAAAAGATGAAGTATATGCGACTGGTGATGCAGGGTTGCTTGGAG
CTGTTTTGGAAGCATATAATCATCAttggaatctcaaaatttctCCTGAT
GATTTTTGGATCCCTGTTGCAATTCGTGTTGGTAGGAAAATCAATGATAA
TGCTAAGGAGGACAAAGTTAGAGATTTCTTTGTTGATTTCGAAGgcaaaa
aagaaattgtcatTGAATCAGGGGCAGAGACAATTTATCAAGTTGATTAT
ATCTGgttatttgaagaattttcacaaaacataaaaaatcttatcaaaaa
gCCAGAGTACAACGACCTGATGACTGCTAGTTTTTCAACATCAACTCCGA
TCACAAAAATCGCCTCCCAAATCAATATAATGTCTTCActtcaagaatat
tttgaattcaCTTGTGTGCTGGGGTGCGGTATCAAAGGAGTGGAGATGAC
TGGCAATAAAGAGGACTGGAAATCCCTTataacaaaaattgacaaaCTTA
CGGAATTGCTAAGCCCACTAGAAGACGTCTTGAAGCTTTCAGGTTGGTTG
AAAGTTGTTCGTGGTGTGTATGAGAAGCTACTGGTAACTTTCGAAGGAAC
GCCAGACAAGAATTGGTGGAGCAAAATCATTTCCAAAGTTCCATTTGGAT
CAGGTAGTCAAAAGCAATATGAAGGTTGGATCGTACAGTTTCTAGAAGGT
AATACAGAAGAAAAGGAGGGAAGATAAGATGTATGTATCCCCTTTTGGGA
TTTTGCTGGCCAGAGTATCAGGCGTGATACAAAAGCCTCTGTTTAACCTT
GGTTAATGGCTCTAATGTGATATATTAACTCTTATACATTTCATTTAGAT
GAGGCACAGGATTTTATTTGTACATCTTTCTTTGCAGGTAAACCCAGTGT
CCAAACATTATCAGCTATGCAAAGTTCCATAACAAGCGTACCGATGAAAA
TAACGTACGACCAAAATTGTGAAGGAGAACAAAGTGCTCTTGTTGCAGGT
AAGTTTAGGAACAATGGCAGCCTAAATATGTATATCTGTAGAGTTAAGTG
AATTTTCGCCATGTTAAGTTGTATGATAACTGATGATGGCGCaagccgaa
aagctttttatccaattttcaaatatattttatatttcacaAATTATATC
TGTAGACATTTTGATGTTTCTGGTTTAGCGTCTAAATCTTCCTAAAGCGA
TTTGCATTCCATTATAAGAAGGCAGCACATGTATAATTTGAATCTACTAA
CCCCGGGTTTACAAGAATGGCGAAGCTGTAAAAATACAATGTTCGAATTA
ACTCCAATAAATTTTTAGGTTTTTCATACGTTACTTCGTCAAAATAGCAA
ATTACAGATTGAATATCCGGTGTAGAGCAGTGGATATCAAAGTCTCACTC
GATAAATTGCTGTTCGTAAATTTTGAAGCAAGATTTTCTCAGTATTAAAT
TAcgttattttgttattttgactGATTCTAATATTGTTTTAATCAGTTTT
GGAATTTCGTGCAAACGAACTTCGATCGAAGGACGGatcttaaaaataat
ttccgCGGAAACTGAGCTTACATATCGGGCTAATGAAAAACTTGATAGAG
tttaacaaaagatttttgttaatattatattatttaaATATTATCCAGCT
TTCGATACAATAGGCCTCAGAAAACCCTTTTTGCTACCAACTACCCAAAG
AAGTAATTCTGGCCAATATGTCCCTTAATCGCGGGATAAGTTGATGATAG
AATTTTcttgaagaaaatataaaaagtgtTAATCTATTTCCAGGACCAGT
TGGATTTACAATCGAAGAAGGGAATAAAGATTCGAAAAATGTTCCAACAA
TTCGACCGTACATTGGATGGGCTTTGTTGTTACCAAAGAATTCAGGATTT
AGATGAAAAACTAACTGAATTAATTAGCTTGACAGTTTTTGAGCTAACAA
ACACATACAGAACTTTATTGGAAAACCTATTTTAGTGAGGCAAAGTGTAA
CCTTTTTATGATAACTCCAAATACAATATCTCCATTAAACCTGCACTTAA
AGGAAAGAACAATGACTTTCTGCGAATAAAACCCTCTTTTTCTGTTGACA
ATTCGTTCAAATTTATTCTTTCTTCGCTTAACTGAGCCACAATGCCTCAA
TTACTTCAGAAAAGTCCATCTTAAAATGCTTCATATTGGGTTTTAGAATG
AAAGTTAATTAAACTTGAGAAACTTAGGTAAGCCCGGAGCGAAGTAAACA
GTGTGTTTAAGTTTGTTCGAAACTTTACGATATTTTCCGTTTACCGTCAA
TAATGGTTAAGCTCCGCGTATATATTTCCCCGTGTTTACGATGGCATTTT
CTAGTTATTACTAATTATGTTTTTAAGTATTCAATATCTATATtcttttg
taaacataaattttataTTGATATCCAAATAACCATCGGACTTTCTTTTC
GAAAACTTATGCACTCTTCATCGTTTTTCTAGATTTGAGCACATTAATGC
CtaaaattcacaaaagaaaATCAGCCTAGCCTTATTTACAATTTActttt
tctcataaaaagaCGTGTTTACCCTATGCTTAAAGGTAGAGAGGCTAAAA
TTGTGGATAAATCATGGAAGTGTTAGTGTACGAGTGCAGGATGGAAATTG
AGAGATGATATCTCCAAGAGTATTCTGAGCACGTGGTCACATTCCACAGG
CACGTGGTATACTGTTTCTCCTCGCGTAATTATAGAAAGAAAGATAATGT
TCCACGGTTTGCACACATGTTTCACTTCCTTGATAAGGCTACGTCGGTCA
CTCCTTCCTTCATTTTGAGCGTGAaactaaaagcctggagctgccTATTA
CTGCTAGACTATTTTCTTGGTAATTCGTATGAACAATATCTCCGAGCAGA
TTGTATCAGAGAATCCCGTTTACATCGCATCTCTATTTATTTTTGACGGT
ATTTGATCActtgacggtgtgacggtatcTATAAACCAgtctcttttcaa
aatttagattgATTACCGTTTTCATAGCACAAAACGTTTTTCTCTATTCT
CAAGAAATCAAAGTATCTTGAAATGGATCTactttgtgaaaattttaacg
GCATGAAGAGATAAAAGTTAATTGacgttaaaaaatatataatgcaGAAT
CATTGCTTTCTCAATGCTTTTATTTACGCAAAAGATAAATATCTATCTCC
ATGCGTTTTCTCTAATGATGTGTTATTCATTTCATTTTGACATACTTCTA
GGAAAATCTTCCAATCCGTTATAATTATCCAACCAAATAATAACACCAAT
TATATTTTAATTGGATAACAGCACGAAGCGAAACTAATTCTTTATTGCCA
CGttttaatatattttctttctccacgttttctttttttggcaTATCCAC
CCTCTATTGTTTCTGAGTTTCTAACCATGGGTATAAAAGGAATGATGttt
caattgaaaatatcatcaaacaacaaacagTTGATTTGAAGAGTaaaaaa
aCAGAACAGAAGATAATCATTTGGCtgtttttataaatcaaaaaacaaag
aagagaATTTTAACAGAATTTCAGATAactaatttaaaaagttttatttt
caataaaaggTGTCTACTGAAAATCTTGTATCGAATCATGCAATTaacac
aaaacaaaagcaaTAATATTCTATAAAACTTTAATTTACTGTGGTGTTAA
AGATAAGAGTTAAGTATTGAGAGAATTTATTAatgagaaattttgattta
gtgGAAATATATTAATCATATTTTCTAACCTTGAATGAACCTTCTAAAGA
ATGAAGTTACACCATTTATCATTAGTTTTGGTATTCGGTTGTTTATTACA
AGTTGAATCACAAAgtaagaatttacaaaaaattcattattttgtccAAG
TAATGTCCATATATCTACTCAACAGGaatttatttttacatcaaaaaaat
caatacaaGAATTGATATATTTGCATTTTGTTCTCTTCtaggcccccccc
cagcggtttgcgtgaatgcgtgaatgcgtgaatgggcattttcacttgcg
tgattgcgtgaaaattgaaaaataattgcgtgaatgcgtgaattgaaaaa
acttgcgtgaacgtgaaaatccactttttgattgcgtgaatacgtgaatc
tgggctattttgtgcgtgaatacgtgaatttccCCTTATTTCCACCAATA
ATGGGTacttttcccgattttccaatgtttccccgatttttcccaaaaat
ttcccgattttctgaaaaatcggattattgcgtgaaactcgaggaaaatt
tgcgtgaatgcgtgaattttgaaaaaaaattgcgtgattgcgtgaattga
gggtccactgggggggcctcttttaTGATTTGGTTTTAAGGAAAGATACA
AAATTTGTTATTTATGATATTAAAGCTTTTGTATCTATAAATTAATCATG
GTAGTTATTTGAGACAACACAATCTGGTCAAAAGTAGACTCGAACCAAAG
ACAACCGTAACCATACCTCGACCTTATTATTCACGCTAACGCtttgcatg
ttttttttatgagaacatttatgacaaaaattttgaagcctacAGAAGta
cttaacttttcgagttgttgttttcaccaatttttgagtatttttgtcca
ttttcctaagaaattggatgttcCAGGGTCTACAgaagtgttcttaactt
gctcttaacaatTTGgtcctcgaagccttatgttcttataaaaaaacgcg
ttCTCATCATAAATAAATGCTGCCATCGGCTGTTTCTTAAAATAGAAATT
CCCCTTCCAATGCTGATGATGCAATGATAACATTATAGAAAAGATTTTCA
GCGTCTTTGAAGATAAAAATGTGATAACGTAGTAAGTACTTTTGAAATGT
AATGGAAGCTAGACTTTCTAAGCAACCGAATATAAATACTTTAAAGAAAT
AGAGTGCTGCTTGCGTTGAAACTATTGCAtttttttGATAAGTAAAAACA
AGATCCGTGTGCCATGAGAATCACACTTTAGTCTTTCtttgaaatataag
aaaaattcGTCTAAAATGACTTCTATTTAAATTCTTAAAAGacaatatat
attttatacattTCATGCACTTTGATACTCACATTACCTACATGGAATGT
ATTGCCACGATTTGTCGTCGAGTCGACCTCCATTCACTTGTTTAAACAAA
ACCTTAATGAAGCGTGGAAAAGACACAAACTTAGATATTTAACAAATTAG
AATTGTAATCAAACCGTTTCGTAGAGGCCCACCTCAGGCCTGTGAACTTG
TatactgtataataataataattaccaTCAGCGGGCAAACGCACCCGGCC
TACTACGGTACATGGTTGTGGGTAAGTAGAGAAATCGAGGGAAAAGAACG
GCTTCCTTATCATCAAGAAGATTTAGGAAAAGGAAAACGTCAGGTCACCG
TCAGGTTGACGGCGGTTGGAAGCTTACAAATTTACTGTAACTTTTATCTT
TATAGAAAGACAGAAAACAATATTTAccgaaaaactcaaaaaaagcgtaa
aaaTGGATAGTTCAAAAGAGATATCGAATGACAGTCGGTATATTGATCTT
GGATTGCCAGCGGATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAGG
CAAGAGATGGGGTTGGGTGAAGCAATGTAGAATGTTTGAAGTTGATTATG
ATATAGATATCAAGGAACGAGAAAGAGATATTGGGGATCAACCGGAAAAC
TGTCCCAAAAGTGCATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTGA
AAAGAAGGAATCCAACAAAGGACCATCATTTGGTGCTAATCCAAAGAAAA
GTGTTttcgaaaaagagaaaaaggagCCAATTGTAGGGGATAAAACTGTC
GCTTTGGGAACAAAAGATGAAGTATATGCGACTGGTGATGCAGGGTTGCT
TGGAGCTGTTTTGGAAGCATATAATCATCAttggaatctcaaaatttctC
CTGATGATTTTTGGATCCCTGTTGCAATTCGTGTTGGTAGGAAAATCAAT
GATAATGCTAAGGAGGACAAAGTTAGAGATTTCTTTGTTGATTTCGAAGg
caaaaaagaaattgtcatTGAA Coding sequence (CDS) from alignment at sc0000200_pilon:117559..124080+ >XLOC_042640 ID=XLOC_042640|Name=XLOC_042640|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1236bp|location=Sequence derived from alignment at sc0000200_pilon:117559..124080+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGACAGAAAACAATATTTAccgaaaaactcaaaaaaagcAAAGACAGA
AAACAATATTTAccgaaaaactcaaaaaaagccgtaaaaaTGGATAGTTC
AAAAGAGATATCGAATGACAGTCGGTATATTGATCTTGGATTGCCAGCGG
ATAAAAAATCAATGTCTTTGTTGGACTACAAAGCAGGCAAGAGATGGGGT
TGGGTGAAGCAATGTAGAATGTTTGAAGTTGATTATGATATAGATATCAA
GGAACGAGAAAGAGATATTGGGGATCAACCGGAAAACTGTCCCAAAAGTG
CATCAAGCTGGATGGAAGAGTATGCAGCAATTGCTGAAAAGAAGGAATCC
AACAAAGGACCATCATTTGGTGCTAATCCAAAGAAAAGTGTTttcgaaaa
agagaaaaaggagCCAATTGTAGGGGATAAAACTGTCGCTTTGGGAACAA
AAGATGAAGTATATGCGACTGGTGATGCAGGGTTGCTTGGAGCTGTTTTG
GAAGCATATAATCATCAttggaatctcaaaatttctCCTGATGATTTTTG
GATCCCTGTTGCAATTCGTGTTGGTAGGAAAATCAATGATAATGCTAAGG
AGGACAAAGTTAGAGATTTCTTTGTTGATTTCGAAGgcaaaaaagaaatt
gtcatTGAAcgtaaaaaTGGATAGTTCAAAAGAGATATCGAATGACAGTC
GGTATATTGATCTTGGATTGCCAGCGGATAAAAAATCAATGTCTTTGTTG
GACTACAAAGCAGGCAAGAGATGGGGTTGGGTGAAGCAATGTAGAATGTT
TGAAGTTGATTATGATATAGATATCAAGGAACGAGAAAGAGATATTGGGG
ATCAACCGGAAAACTGTCCCAAAAGTGCATCAAGCTGGATGGAAGAGTAT
GCAGCAATTGCTGAAAAGAAGGAATCCAACAAAGGACCATCATTTGGTGC
TAATCCAAAGAAAAGTGTTttcgaaaaagagaaaaaggagCCAATTGTAG
GGGATAAAACTGTCGCTTTGGGAACAAAAGATGAAGTATATGCGACTGGT
GATGCAGGGTTGCTTGGAGCTGTTTTGGAAGCATATAATCATCAttggaa
tctcaaaatttctCCTGATGATTTTTGGATCCCTGTTGCAATTCGTGTTG
GTAGGAAAATCAATGATAATGCTAAGGAGGACAAAGTTAGAGATTTCTTT
GTTGATTTCGAAGgcaaaaaagaaattgtcatTGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000200_pilon | genome | sc0000200_pilon:117559..124080 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 43-618:5947 |
| Aaloc | 1-39:1 |
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