XLOC_042638 (mRNA) -

Overview
NameXLOC_042638
Unique NameXLOC_042638
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000200_pilon:157015..157678+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042638 ID=XLOC_042638|Name=XLOC_042638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=664bp|location=Sequence derived from alignment at sc0000200_pilon:157015..157678+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGTATGCATTTTCAGGTTGCATGCGTTTTCAGGTTGTATGCGTTTTCA GGTTGTATGCGTTTTCGGGTTACATACGTTTCAGGTTGTATACgttttca ggttgtatacgttttcaggttgtatacgttttcaggttgtatgttttttc aggttgtaTGCGTTTTCATATTACAAACGTTTTCGGGTTGTATACGTTTT CAGATTATATACGTTTTCAAGTTGTATACGTTTTCAGATTATATACGTTT TCAAGTTGTATACGTTTTCGGGTTACATACGTTTTCAAGTTTAATACGTT TTCAGGTTGTATGTGTTTTCAAGTTGTATACGTTTTCGGGTTACATACGT TTTCAAGTTGTATACGTTTTTAGGTGGTATGCGTTTTCAGGTTGTATGCA TTTTCAGGTTGTTGCATACGTTTTCGGGTTACATACGTTTTCAAGTTGTA TACGTTTTTAGGTGGTATGCGTTTTCAGGTTGTATGCGTTTTCAGGTTGT ATGCGTTTTCAGGTTGTATGCGTTTTCAGGTTGTATACGTTTTCAGATTA TATACGTTTTCAAGTTGTATACGTTTTCGGGTTACATACGTTTTCAAGTT GTATACGTTTTTAGGTGGTATGCGTTTTCAGGTTGTTTGCGTTTTCAGGT TGTATGCGTTTTCA

Coding sequence (CDS) from alignment at sc0000200_pilon:157015..157678+

>XLOC_042638 ID=XLOC_042638|Name=XLOC_042638|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=984bp|location=Sequence derived from alignment at sc0000200_pilon:157015..157678+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGGTATGCATTTTCAGGTTGCATGCGTTTTCAGGTTGTATGCGTTTTCA
GGTTGTATGCGTTTTCGGGTGGTATGCATTTTCAGGTTGCATGCGTTTTC
AGGTTGTATGCGTTTTCAGGTTGTATGCGTTTTCGGgttgtatacgtttt
caggttgtatacgttttcaggttgtatgttttttcaggttgtaTGCGTTT
TCATATTACAAACGTTTTCGGGTTGTATACGTTTTCAGATTATATACGTT
TTCAAGTTGTATACGTTTTCAGATTATATACGTTTTCAAGTTGTATACGT
TTTCGGGTTACATACGTTTTCAAGTTTAATACGTTTTCAGGTTGTATGTG
TTTTCAAGTTGTATACGTTTTCGGGTTACATACGTTTTCAAGTTGTATAC
GTTTTTAGGTGGTATGCGTTTTCAGGTTGTATGCATTTTCAGgttgtata
cgttttcaggttgtatacgttttcaggttgtatgttttttcaggttgtaT
GCGTTTTCATATTACAAACGTTTTCGGGTTGTATACGTTTTCAGATTATA
TACGTTTTCAAGTTGTATACGTTTTCAGATTATATACGTTTTCAAGTTGT
ATACGTTTTCGGGTTACATACGTTTTCAAGTTTAATACGTTTTCAGGTTG
TATGTGTTTTCAAGTTGTATACGTTTTCGGGTTACATACGTTTTCAAGTT
GTATACGTTTTTAGGTGGTATGCGTTTTCAGGTTGTATGCATTTTCAGAT
TATATACGTTTTCAAGTTGTATACGTTTTCGGGTTACATACGTTTTCAAG
TTGTATACGTTTTTAGGTGGTATGCGTTTTCAGGTTGTTTGCGTTTTCAG
GTTGTATGCGTTTTCAATTATATACGTTTTCAAGTTGTATACGTTTTCGG
GTTACATACGTTTTCAAGTTGTATACGTTTTTAGGTGGTATGCGTTTTCA
GGTTGTTTGCGTTTTCAGGTTGTATGCGTTTTCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042638XLOC_042638-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000200_pilongenomesc0000200_pilon:157015..157678 +
Properties
Property NameValue
Aaloc376-492:548
Aaloc70-372:103
Aaloc1-66:1