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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000200_pilon:204458..208412- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042636 ID=XLOC_042636|Name=XLOC_042636|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3955bp|location=Sequence derived from alignment at sc0000200_pilon:204458..208412- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAGCTATCAATATTATTGAGAACGCAATGAAAAGTATCAAAAGTGA
GAAACAAAGTTATGCTGAAGGACTTACCATTCATGGGGCAAGTCGAATTG
CAACTGGTGGAATCAAAAGCAAGATCATCTGGTCCATCCTCGTGGTTGCT
TCTGTAATTCTTGCTGGCTACATTTCCAGACATCATTGGGTTGAATACTT
AGACGACCAAAGTATCATCACATTGAAAGTTGTCAGAGAAAAAACGATGG
AATATCCAGCCATCACTATATGTAATTATTATGGTATCAACAGAGAAAGA
CGATCTTTCGGTAGTGGTAAGCCAGCGTTTAAGCGTCCAATACTGGTTGA
TGACAGCTTTGACTTGGGTGCATGCAGTTTCAACTTAACAAAGTGTGGTT
ATAACGGAACAACGTTGATGAAAGCTTACAGTGCTGAGGGAGATTACTCA
AATCATGTTCTACAAAACCAATTCATTGAATTCGACAATACAACAAACTG
TTTGACATTAAGTGGATACACACAGAGATCAACAGCCAAACGTCTTTACT
TGAATGCTGTTGCGGATCGATCTGTTGACACGTGGAGTGAGCTTTACATC
AACCCAACATCTGAAGGCTTCCAAGAAGCGTCATCACGTATTTATTGGGC
CAGTGAAGGAGATTATCGTGTCGACATCCGCAAACGGATAATCACCAGAC
TGGGTCTTCCTTATACTGATTGTGTTGAAGGTCAAGGTACTTATACACAA
AACAAATTCAAAGGGAATTATACTGTTAATAAATGCAAGAAAGGTTGTTT
TTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATTCCACACATGTATAAGA
AACACATGCGAGAACCACACAAGTTTGAGAACAAGCTTCGTTTGAATGAT
ACTGAGGCAGAGACTTGCTTAAAAGGAGTGGAAGAAGACCACGAGGTATA
CAATAAGTGCAACGCTTTTTGTAGGTTACAACCATGCTACGAAGAAGACA
TCAAAATGTCTTTAAAATATCACACCACAAAGAATCAGAACAATCTTCTT
TCATTAGCTTTTGGATACGAATACTTTTTGGTGAAAGTGTACGAAGAAAC
ACCAAGAGAAAAATGGGTGGATTTGTTTGCGAATTTTGGTGGTTGCGTTG
GTCTCATGAATGGTCTCTCCATTCTTTCAGTCTTTGAACTGTTCATCTTT
TTTGGACTCGTCCTCTTCGATTATTTTAAGAATCACTCAAAGATGAAGGA
TGATGGTCATTAGGAAGTTTGAGATTGTATGCTGATTATTAATACCTTAA
AAAGATTAAAGTAATTAAGAATTTGCTATTAATTTGTAAATAATTTATCT
GAGATTGTAAATATCGAGAAATAAAGAACTAACTGCATTGCTTCAAGATC
GCGCCAGCATGAAACACCACGTAGCAATTTTTAGTTCGAATTTTCTTCAT
CACATTGTGATTCTGCTTATTTCACTGAGATTGTAAATAGTATATAAATG
TATGAAAAGTTCTTTAGTATTTTTGGGAATTAGTTATTATAGGGAAAAGG
CATAGGCTGACTGTCTAAGAATTCCTTGATGTTGTTTTAATTAAGAGTCT
AACAATGGGCTCTCCCAGAAAAAAAAATGAATATGGGGGGATTAATATTG
AGTTAACAAATAGCGCATGCGTACAAAATTGATGTAGAAAGACCAGGTGC
TGAAACTCAACAAGACTTTTGAAATAGGATGAAGCTGTTTGTTTTGGTTA
CTTTAAACAACGCTGTGATTCGTAACATTTTCATTTTTACGAAGTTTGTT
GATATCTATGATTAAAAAGATTTTTCCGCAGTCAACTAATTTAGTCTTGT
CTGTTTAATGGATCTGAGTCGGAACTAACACACTGCGTTATGACAATTGT
AAATGGACCTCTTTTCGATGTCCATTATTTACATGACCGAAGAGGAGCTT
CAACATTTCGCGCTGTGCTGTCATTTTAAAAACAATTCAAGGTCTTTTTC
AATCTTCCTTAATAAAGTTCAGCTGCTCATAGGATACAAACTGTGCTTAG
AATCTAGTCTTTTCAAATTTTTAATTAGTTTTTAACAGTAGTTAACTATC
AATCATTTATTTGAAATTGCGAACAAAAGGAATTATCAATTTCATTATAT
TCAGTCAATCTGAAATACAAAAGAATGGAAAATTTTACCCTTTGAAAACA
TTTTTCTTTTCAATTTATGAAGTGAACGGTAGAGCGAATGTCTGATTTCT
TCGGCGAAAAGTTTTTTATTTGACAGAAGAATTTCTTTTCTAAGAGCTAT
CAGAAAAAACAAATTCAGAATTACACAAAATGGAAGTAAAAGGTTTAGAA
AAGAAGATTGATAAGTTGTCATTGTTGTTTTCATCTTTGGAATCTAAAAT
CAATCAAAATAGAAGTGATATCCAGGCATTGAATGGCGAAAAGCATCAAT
CACAACCTACCAACAATCCTCCAGATGAGATCACCAAAGCTTTGAGCCTG
AAGTCAATAGACAGTTCTGAAAAAGAGATTAATAGGAGTGCTTCTTCAAC
GCCAGATCAACTGGATGGTATGTCTTTACACTACGAAATTGAAAAACCAT
TTCGCAAGGAAGGAAGCACTAATATCAGTTTCGAGAGTCCTGGGTCATCC
AAATCCTTTGTAATAGCTGATGCAGATGAGGAACCACAAAGAAGGGAAAG
AAAGAAGACTGAAAAACGCGTGCAAAATCTACCGCGATTCTTGGTGGACG
CGGAGGAGATGAAGAGAACAATAGCAAATGAGAAACAAAGTTATGCTGCA
GGGCTAACCATTCATGGAGCAAACCGTATTGCGACAGGAGGCCCGTTGAG
TAAGGTTATATGGTCCATTCTGGTTATTGGATCTTTCCTCGCAGCATTCG
TCATCTCCAAGGAGCATTTGGAAGCTTTTTTGATGGATCATAGTTTAATC
AAGACGCAGCTCATACCAGTGAAGGAGATGGAATATCCTACTATTACTGT
CTGCAACTACTTGGGTATCGTAAGAGAACGAAAACACTTTGCTGGAGGTT
CACCTATCTATACTCGACCGCAATTGGTGAATGTCTCCAGTCTGAGAGAG
TGTGGACGTAACTTAACAAAATGTGGGTACCAGAAAGCAACGCTGCTACA
AGTGAAAAACATCACTTCAGACTTCCAACATAATCATCTGCTGAACAACC
TGGTAGAATTTGATGACACCACAAATTGCTTTACCGTAAGCGAATTTTCA
CAAATGTCTCCATCCGATATCTTCTCCATCGGATCTGTCGCCGATAGAAC
GGATAACTTTTGGACTGAAATCTTCATCAATCCGGCAGGTGAAACATTCT
TTGAGGCTAACCCGAATATTTATTGGGCAAGTGAAGGTTTTTACCATGTC
AATGTCGAGAAGAAGGTCATTCAACGTCTTGGCCTTCCTTATACTGATTG
CATTGAAGGTCAAGGTACTTATACACAAAACAAATTCAAAGGGAACTATA
CTGTTAATAAATGCAAGAAAGGTTGTTTTTGGGAGAAAGAATTCGAAAAA
TGTGGAGCTATTCCACAAATGTATAAGAAACACATGCGAGAACCACATCG
GTTTGAGAACAAGACTTTTGTTGATGACGTCACTGGACACGAATGTTTGG
CCAATTTTGAAGAAGAGCATCATGTAGATGACATTTGTAGTGATGAATGT
GATCTACCACCGTGTTATGAGGAGAAAATCAACATTGCATTGGAGTCTCA
TAAATCTACAAACTATCCCAATTTATTTGAACTGGCGTTCACTTTTGATT
CATTCTTGGTTGAAGTGTTGGAAGAAGTACCGTCGTATGATTGGCATGAT
TTGTTCGCCAATTTCGGTGGTTGTGTTGGCTTGATGACAGGAGCATCTAT
TCTCTCCCTTTTCGAACTTTCTATTTTCTTTGGACTTGTTGTAATAGATT
TCTTC Coding sequence (CDS) from alignment at sc0000200_pilon:204458..208412- >XLOC_042636 ID=XLOC_042636|Name=XLOC_042636|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2568bp|location=Sequence derived from alignment at sc0000200_pilon:204458..208412- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAGCTATCAATATTATTGAGAACGCAATGAAAAGTATCAAAAGTGA
GAAACAAAGTTATGCTGAAGGACTTACCATTCATGGGGCAAGTCGAATTG
CAACTGGTGGAATCAAAAGCAAGATCATCTGGTCCATCCTCGTGGTTGCT
TCTGTAATTCTTGCTGGCTACATTTCCAGACATCATTGGGTTGAATACTT
AGACGACCAAAGTATCATCACATTGAAAGTTGTCAGAGAAAAAACGATGG
AATATCCAGCCATCACTATATGTAATTATTATGGTATCAACAGAGAAAGA
CGATCTTTCGGTAGTGGTAAGCCAGCGTTTAAGCGTCCAATACTGGTTGA
TGACAGCTTTGACTTGGGTGCATGCAGTTTCAACTTAACAAAGTGTGGTT
ATAACGGAACAACGTTGATGAAAGCTTACAGTGCTGAGGGAGATTACTCA
AATCATGTTCTACAAAACCAATTCATTGAATTCGACAATACAACAAACTG
TTTGACATTAAGTGGATACACACAGAGATCAACAGCCAAACGTCTTTACT
TGAATGCTGTTGCGGATCGATCTGTTGACACGTGGAGTGAGCTTTACATC
AACCCAACATCTGAAGGCTTCCAAGAAGCGTCATCACGTATTTATTGGGC
CAGTGAAGGAGATTATCGTGTCGACATCCGCAAACGGATAATCACCAGAC
TGGGTCTTCCTTATACTGATTGTGTTGAAGGTCAAGGTACTTATACACAA
AACAAATTCAAAGGGAATTATACTGTTAATAAATGCAAGAAAGGTTGTTT
TTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATTCCACACATGTATAAGA
AACACATGCGAGAACCACACAAGTTTGAGAACAAGCTTCGTTTGAATGAT
ACTGAGGCAGAGACTTGCTTAAAAGGAGTGGAAGAAGACCACGAGGTATA
CAATAAGTGCAACGCTTTTTGTAGGTTACAACCATGCTACGAAGAAGACA
TCAAAATGTCTTTAAAATATCACACCACAAAGAATCAGAACAATCTTCTT
TCATTAGCTTTTGGATACGAATACTTTTTGGTGAAAGTGTACGAAGAAAC
ACCAAGTTGAAGCTATCAATATTATTGAGAACGCAATGAAAAGTATCAAA
AGTGAGAAACAAAGTTATGCTGAAGGACTTACCATTCATGGGGCAAGTCG
AATTGCAACTGGTGGAATCAAAAGCAAGATCATCTGGTCCATCCTCGTGG
TTGCTTCTGTAATTCTTGCTGGCTACATTTCCAGACATCATTGGGTTGAA
TACTTAGACGACCAAAGTATCATCACATTGAAAGTTGTCAGAGAAAAAAC
GATGGAATATCCAGCCATCACTATATGTAATTATTATGGTATCAACAGAG
AAAGACGATCTTTCGGTAGTGGTAAGCCAGCGTTTAAGCGTCCAATACTG
GTTGATGACAGCTTTGACTTGGGTGCATGCAGTTTCAACTTAACAAAGTG
TGGTTATAACGGAACAACGTTGATGAAAGCTTACAGTGCTGAGGGAGATT
ACTCAAATCATGTTCTACAAAACCAATTCATTGAATTCGACAATACAACA
AACTGTTTGACATTAAGTGGATACACACAGAGATCAACAGCCAAACGTCT
TTACTTGAATGCTGTTGCGGATCGATCTGTTGACACGTGGAGTGAGCTTT
ACATCAACCCAACATCTGAAGGCTTCCAAGAAGCGTCATCACGTATTTAT
TGGGCCAGTGAAGGAGATTATCGTGTCGACATCCGCAAACGGATAATCAC
CAGACTGGGTCTTCCTTATACTGATTGTGTTGAAGGTCAAGGTACTTATA
CACAAAACAAATTCAAAGGGAATTATACTGTTAATAAATGCAAGAAAGGT
TGTTTTTGGGAGAAAGTTTTTGAAAAATGTGGAGCTATTCCACACATGTA
TAAGAAACACATGCGAGAACCACACAAGTTTGAGAACAAGCTTCGTTTGA
ATGATACTGAGGCAGAGACTTGCTTAAAAGGAGTGGAAGAAGACCACGAG
GTATACAATAAGTGCAACGCTTTTTGTAGGTTACAACCATGCTACGAAGA
AGACATCAAAATGTCTTTAAAATATCACACCACAAAGAATCAGAACAATC
TTCTTTCATTAGCTTTTGGATACGAATACTTTTTGGTGAAAGTGTACGAA
GAAACACCAATTGAACTGGCGTTCACTTTTGATTCATTCTTGGTTGAAGT
GTTGGAAGAAGTACCGTCGTATGATTGGCATGATTTGTTCGCCAATTTCG
GTGGTTGTGTTGGCTTGATGACAGGAGCATCTATTCTCTCCCTTTTCGAA
CTTTCTATTTTCTTTGGACTTGTTGTAATAGATTTCTTCTTGAACTGGCG
TTCACTTTTGATTCATTCTTGGTTGAAGTGTTGGAAGAAGTACCGTCGTA
TGATTGGCATGATTTGTTCGCCAATTTCGGTGGTTGTGTTGGCTTGATGA
CAGGAGCATCTATTCTCTCCCTTTTCGAACTTTCTATTTTCTTTGGACTT
GTTGTAATAGATTTCTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000200_pilon | genome | sc0000200_pilon:204458..208412 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1108-1284:178 |
| Aaloc | 1-1104:3956 |
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