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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:264358..267142+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042634 ID=XLOC_042634|Name=XLOC_042634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2785bp|location=Sequence derived from alignment at sc0000247_pilon:264358..267142+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGGACACTCTTACAGCTTcttgaataaaattttatccATTTGTGATCT
CAGTCTTCACCTAACTTTCACCAGTACAAACAAGCAAGACATGGGTGGTC
AAGACTTTATTGTTATCCTTTTATGTGGATTTTGTCTCAGtttttttGGT
AAGTTACCTAACTATCATAACATTAAGAGACTACTTCAATGGgataaatt
aaattcaaaaattaagtccccgcgaaattttatcctatTAAAGTACAAGG
GTTGATTttatcatagtgtcctcccccccctttataaaggggggggggaa
accaattttccaattttgaatgacTGAGGGGGgacagtgaaaatttgaat
agtaaaggggggaaaaaaaagaggggggaaaacatcgGTAGTTgccaaat
ttggtggggggaagtgtgaaatcacttcaattttatctcagcaaccaagg
tcagtccacatgatatcatgtgattagatcatgattgaaaaattaaccaa
ttttcgttctattttgtctagtattttgcagcaaaattttacgttcgtgt
aatggttgaaatttgagaaatttatacagGTAGAtggggggaactgatat
tttcagaattttctggggggaaagcaaaaaagaggggggaaactaaaaaa
ctgaaaagtcacagggggaaaaaaaagaggggggagatttaaaaaaatca
agaatttggtggggggaacaaaccctggaggacactatgttttATGCAAA
CCCTGGCCCTAAAACTATTTCTTTGAAcacaaaatgtatataataatcct
gatggaaaaaaaatagaaataagagGCTATTTTTTCTGAGGAAATCATCG
TCAAGGAAAACACTTATTTCTGCGCATCGACTTCAGTTTGATAACGAACT
ACAAAACTGAAGACTATAGTGAGATGCAAAAGCGCCAAAGTACAGATATA
CAAGTTGGCACATCATTTGAAGTCGCCAGAGTTTATTTAATATACtaatt
cattaatttttgtAAGGGAACAAAAAGCGCAAACTTAAATaatcaaatta
tcaaaatcattttgtttACTTCTATTTCACGTATCAGAAATGGACTGTGG
ACGAATCCTTCCATCAAAGGATCAAAAAGAGACATGGAAAGGAGGAGATT
GTACCGTGAAATGGACACTAAAGCCGTCAGCGAATGAAAAAGCAGATTGG
ATCACTGTTTATCACCAAGCTGATGAAAACGAATACATCAAACCAATCTG
GGAAGACGTCACCGGAAAAACTACATATGGACGCCAAAAGTTTATGAAGA
ACCAAACCTTATCTGTGAATgtacagaaaaatgaaattgaaatcgtCATT
GGAAACATACAAGAGTCGATGATTTTATATCTGACAGCAGTGTTTCTAAA
TAAGGATGGGGAAATGAAAGATGGTCCGTTGCAATCGAAAGTCACCATCA
CTATCTCGAGTGAGTTTCTTCTATCTTTCCTTTTGAAAGACGTACCTATA
CTGAATGAAATTCTAAATAAATACATCTTTCAAATGATGCCGAAATTATA
AGATGTGATACAAAGTTTTGGGACTTCCATTTGGGACAATCGACGTAATA
AATTCACTTTTAGGAACTGTTGCTTCTTCAGTGAAaatactactttaggc
gtacaaactttcctgagcagaaactttcacgctTTTCGCGAGTTTTTACC
TTTTTCGCGATGGTTCATGTCtttaaactttcgcgaatagatcttttcat
aaattacgttgcacgaacatcacttgcctcgtattcaaacaattagcATG
GTGAtcatgtctcttgagacataaatgatttttttatgaataggaagtag
ttttaataaaatccgctgggagttaatcaccatggcaataatttctaaac
gaggcaagtgatgttcgtaacgtaatttatggaaagatctattcgcgaaa
gtttatgctcgcgtaAAACTCTTGTaaaaaaagatctaaaaaacttttaa
ctGAGAAGAAAATGTAAAGATTGGAGCACCTTTTTAGCCTCGTAACTGTA
AGTCAAAAGATAAAGCATTTGTActtctaagccatttttttctaatggaa
attttcattttaatacCTTGATTCGCGAATAGTTATGCCTGCGAAAACGA
TTCTTCcattaaatttgcgaaagtaaaagtcgtgaatttcgagatttttt
tACCTCGCTAAAACTTCTGCTCGTGAAAgattgtacgcctaaagtagtcg
GAATCTATCTTACCAGTAAATTAACTTTCGAGACTGTAAGCCCTTACCTC
attgaataaaataaagtttttattttttctaaggtggaatgaaaatcaaa
aatggcACTCTGATTAAAACATTCGACAAATTTTATCCACGATACGAAGT
TTCATTTGAAATTAAGCCTTATGGTTTGACACCTTGGTCTGATACCAGCA
TATTGGATTTGACAACTGGTGTGTATGATCCGAGTGTTCTAAATGTGCGG
TTTATATCCAACTCAACAACTCTATATATTTGCTCACGTGGTAGTTGGTG
TTACATTGGGAAAGAAGATCTAACGACAGAGAAATACACTCACATCGACA
TCAAACAATcgaaaacacaaaatcaaaCATATTTCGTTACAATCGCGACA
GATGGAACAGAGGTTTATAGGAAAGTGAACATTCACCCTGAAAACTTCAC
AAATGttaaagtttatcaatcaaGTCCGATGTACACCCCAGCTAAAGCCT
TCAtcagaaatctcaaaattataacTAAACCATGA Coding sequence (CDS) from alignment at sc0000247_pilon:264358..267142+ >XLOC_042634 ID=XLOC_042634|Name=XLOC_042634|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1944bp|location=Sequence derived from alignment at sc0000247_pilon:264358..267142+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAGGACACTCTTACAGCTTcttgaataaaattttatccATTTGTGATCT
CAGTCTTCACCTAACTTTCACCAGTACAAACAAGCAAGACATGGGTGGTC
AAGACTTTATTGTTATCCTTTTATGTGGATTTTGTCTCAGtttttttGAA
AGGACACTCTTACAGCTTcttgaataaaattttatccATTTGTGATCTCA
GTCTTCACCTAACTTTCACCAGTACAAACAAGCAAGACATGGGTGGTCAA
GACTTTATTGTTATCCTTTTATGTGGATTTTGTCTCAGtttttttGAAAT
GGACTGTGGACGAATCCTTCCATCAAAGGATCAAAAAGAGACATGGAAAG
GAGGAGATTGTACCGTGAAATGGACACTAAAGCCGTCAGCGAATGAAAAA
GCAGATTGGATCACTGTTTATCACCAAGCTGATGAAAACGAATACATCAA
ACCAATCTGGGAAGACGTCACCGGAAAAACTACATATGGACGCCAAAAGT
TTATGAAGAACCAAACCTTATCTGTGAATgtacagaaaaatgaaattgaa
atcgtCATTGGAAACATACAAGAGTCGATGATTTTATATCTGACAGCAGT
GTTTCTAAATAAGGATGGGGAAATGAAAGATGGTCCGTTGCAATCGAAAG
TCACCATCACTATCTCGAAAATGGACTGTGGACGAATCCTTCCATCAAAG
GATCAAAAAGAGACATGGAAAGGAGGAGATTGTACCGTGAAATGGACACT
AAAGCCGTCAGCGAATGAAAAAGCAGATTGGATCACTGTTTATCACCAAG
CTGATGAAAACGAATACATCAAACCAATCTGGGAAGACGTCACCGGAAAA
ACTACATATGGACGCCAAAAGTTTATGAAGAACCAAACCTTATCTGTGAA
TgtacagaaaaatgaaattgaaatcgtCATTGGAAACATACAAGAGTCGA
TGATTTTATATCTGACAGCAGTGTTTCTAAATAAGGATGGGGAAATGAAA
GATGGTCCGTTGCAATCGAAAGTCACCATCACTATCTCGAgtggaatgaa
aatcaaaaatggcACTCTGATTAAAACATTCGACAAATTTTATCCACGAT
ACGAAGTTTCATTTGAAATTAAGCCTTATGGTTTGACACCTTGGTCTGAT
ACCAGCATATTGGATTTGACAACTGGTGTGTATGATCCGAGTGTTCTAAA
TGTGCGGTTTATATCCAACTCAACAACTCTATATATTTGCTCACGTGGTA
GTTGGTGTTACATTGGGAAAGAAGATCTAACGACAGAGAAATACACTCAC
ATCGACATCAAACAATcgaaaacacaaaatcaaaCATATTTCGTTACAAT
CGCGACAGATGGAACAGAGGTTTATAGGAAAGTGAACATTCACCCTGAAA
ACTTCACAAATGttaaagtttatcaatcaaGTCCGATGTACACCCCAGCT
AAAGCCTTCAtcagaaatctcaaaattataacTAAACCATGAgtggaatg
aaaatcaaaaatggcACTCTGATTAAAACATTCGACAAATTTTATCCACG
ATACGAAGTTTCATTTGAAATTAAGCCTTATGGTTTGACACCTTGGTCTG
ATACCAGCATATTGGATTTGACAACTGGTGTGTATGATCCGAGTGTTCTA
AATGTGCGGTTTATATCCAACTCAACAACTCTATATATTTGCTCACGTGG
TAGTTGGTGTTACATTGGGAAAGAAGATCTAACGACAGAGAAATACACTC
ACATCGACATCAAACAATcgaaaacacaaaatcaaaCATATTTCGTTACA
ATCGCGACAGATGGAACAGAGGTTTATAGGAAAGTGAACATTCACCCTGA
AAACTTCACAAATGttaaagtttatcaatcaaGTCCGATGTACACCCCAG
CTAAAGCCTTCAtcagaaatctcaaaattataacTAAACCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:264358..267142 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 523-972:2336 |
| Aaloc | 151-519:1090 |
| Aaloc | 1-147:1 |
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