XLOC_042629 (mRNA) -

Overview
NameXLOC_042629
Unique NameXLOC_042629
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000247_pilon:380885..381980+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042629 ID=XLOC_042629|Name=XLOC_042629|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1096bp|location=Sequence derived from alignment at sc0000247_pilon:380885..381980+ (Clytia hemisphaerica_ch_hm2_pilon)
GCCAGATGCGATGTAAATAATCTCCAAAATAGCATCGATCAAATTGATGG TGAAATCAGCACAATAGAAATTACCTTGGAAGAAAATGCCGAAACCAAAA TGAACATTCGAAAGATCATCGATTGTCGACCTAATGTTTGGGGGAGACGA GAGGAGTTATTCAAACATTATGAAGAACTTTGTCAACGTAAAGTAATCGT ACAGCGAGTTCTGAATgatttgaagatgaagaagacaGTTCTTGAACAGG AGAAGATGCGTTGCTTGAACAGAAGTTAGTGAAATTATTTCAGGGAGAGT TTTAGAGAGAGCTCTACTCAGTGGTATAAAATCacacgttttttctttat tagaacccagtttataagaacatttaggctgaaattcgtcgacaaattaa gaacatcgtaagagcatgcccagcctcagtttggaaaaaaatgacaagaa actacaatttttccctcttttcaagcagttttaaccaaacttagggatgg attttctaaaatcgagagtcaaatattgtccaaattttaccaacaagctc tttattttgcatgatgttgtcgatttaaagtagtccgaaaaattaagaac gcatttaagaacattttaggctgaaaattgctaaaaaaataagcacatcc aggctcagccaaattttaggtgttctaataaaagaaaacgtgtattaatt aaagggacataaagtagtaaaatataaacattgcgcaatccacgtgtcat taaagagaacaattaaaatcacgtgcccaaaataaacttgtaaaacaatt gaaacaatcaaaatcagccatatttgtttttattttttattttgacatgt gacattcgttttgattttgaatcccgctgcatacggtttgtttataaatt ttgtcagtacttttatgtccctttgaAGGTCTAATATTGGTATTAAATCT ATTGCTTTTAGCTCTAAGAAAGCCAGTGGTATTCATTTTCCATGGAGAAA ACAATGTTCACGATTCCCAGTTGAGATATTAAACGATATTACTTTCTCTT CTCAGGTTGGTTTCGCAAGACATTGGAGAGACATTGGATGCTATGA

Coding sequence (CDS) from alignment at sc0000247_pilon:380885..381980+

>XLOC_042629 ID=XLOC_042629|Name=XLOC_042629|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=630bp|location=Sequence derived from alignment at sc0000247_pilon:380885..381980+ (Clytia hemisphaerica_ch_hm2_pilon)
GCCAGATGCGATGTAAATAATCTCCAAAATAGCATCGATCAAATTGATGG
TGAAATCAGCACAATAGAAATTACCTTGGAAGAAAATGCCGAAACCAAAA
TGAACATTCGAAAGATCATCGATTGTCGACCTAATGTTTGGGGGAGACGA
GAGGAGTTATTCAAACATTATGAAGAACTTTGTCAACGTAAAGTAATCGT
ACAGCGAGTTCTGAATgatttgaagatgaagaagacaGTTCTTGAACAGG
AGAAGATGCGTTGCTTGAACAGAAGCCAGATGCGATGTAAATAATCTCCA
AAATAGCATCGATCAAATTGATGGTGAAATCAGCACAATAGAAATTACCT
TGGAAGAAAATGCCGAAACCAAAATGAACATTCGAAAGATCATCGATTGT
CGACCTAATGTTTGGGGGAGACGAGAGGAGTTATTCAAACATTATGAAGA
ACTTTGTCAACGTAAAGTAATCGTACAGCGAGTTCTGAATgatttgaaga
tgaagaagacaGTTCTTGAACAGGAGAAGATGCGTTGCTTGAACAGAAGT
TGGTTTCGCAAGACATTGGAGAGACATTGGATGCTATGAGTTGGTTTCGC
AAGACATTGGAGAGACATTGGATGCTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042629XLOC_042629-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000247_pilongenomesc0000247_pilon:380885..381980 +
Properties
Property NameValue
Aaloc277-315:1058
Aaloc1-273:1