XLOC_042628 (mRNA) -

Overview
NameXLOC_042628
Unique NameXLOC_042628
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000247_pilon:411672..412629+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042628 ID=XLOC_042628|Name=XLOC_042628|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=958bp|location=Sequence derived from alignment at sc0000247_pilon:411672..412629+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTCAAAACACCGACAAAAAAGATGAAAGTTAGCAATTTCTCGAACAC TTGGATTTTGTTACTTGATGTTGCTGTTCTTGGTTGTCTTATTGCTTCAT GGATAGGTCATGAATGGTATGTTTTCCTCGATGAACATGACCTCACATTC CCTATTGAAATCACTTTTGGTCTATGGGAAAGATGCTCCATAACATTGAC ATCTACAGCGTGTATCAAGTATGAGTTACACCTTACATGGATGAAAATAG TACAATGTTTTATTGTTATATCCAGTGTGTTGACTGTTTTGGGAACTGTA TTTACTGGAGCAGTGTTCATGAAAAGTTGCTACAACAAATGGTCGATGGC TATCAAACTTCTTGTTGGTGGGtgactttgattttcatagCATGAAAAGA TTAAATTCTTTTCAACTTTCCTTTAACTCTTTTCCAGTTTTGGATTATAG TCATAAAGTACTCATCTATATATCTCAAGACTCGGTGATAATCCTTAAGC CACAATAGGAAAACAAATACGAAGGGTTGTAACAATAAATTGCTTACATT GAGCGAGGCTACCTAAAAGCTTGTTTATTTCCCAGTATAGATGCGAGTCG AGTAAAATATTCCGGAGTAGGAGACAAAATTAAAGAATATCACACTCGTT GAGTATGAATCTCTAGCCAACTCATCATTTACCCCAATAATGTCCCAGTG GGTCTTATTCTGCCttttccagttttttgttttcttttagttGGTTTCAC AACCGCGGCAGCTGGAATCTTCTATCACAACCATTCCACACTTCTTCCGA TGTCTGTAGACGTCCGTGCGATTCAATATGGATGGTCTTTCCACGCTACA ATAGCCGCCATCATCATTCTCATCGTTTCTTTTATCATACAACTCTTTTC GTTCGTTTATTTGAGAGATAAAGAAGTTGTGGAAGTTCAATACCAGATGG CGTTGTAA

Coding sequence (CDS) from alignment at sc0000247_pilon:411672..412629+

>XLOC_042628 ID=XLOC_042628|Name=XLOC_042628|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1170bp|location=Sequence derived from alignment at sc0000247_pilon:411672..412629+ (Clytia hemisphaerica_ch_hm2_pilon)
CAGCTCAAAACACCGACAAAAAAGATGAAAGTTAGCAATTTCTCGAACAC
TTGGATTTTGTTACTTGATGTTGCTGTTCTTGGTTGTCTTATTGCTTCAT
GGATAGGTCATGAATGGTATGTTTTCCTCGATGAACATGACCTCACATTC
CCTATTGAAATCACTTTTGGTCTATGGGAAAGATGCTCCATAACATTGAC
ATCTACAGCGTGTATCAAGTATGAGTTACACCTTACATGGATGAAAATAG
TACAATGTTTTATTGTTATATCCAGTGTGTTGACTGTTTTGGGAACTGTA
TTTACTGGAGCAGTGTTCATGAAAAGTTGCTACAACAAATGGTCGATGGC
TATCAAACTTCTTGTTGCAGCTCAAAACACCGACAAAAAAGATGAAAGTT
AGCAATTTCTCGAACACTTGGATTTTGTTACTTGATGTTGCTGTTCTTGG
TTGTCTTATTGCTTCATGGATAGGTCATGAATGGTATGTTTTCCTCGATG
AACATGACCTCACATTCCCTATTGAAATCACTTTTGGTCTATGGGAAAGA
TGCTCCATAACATTGACATCTACAGCGTGTATCAAGTATGAGTTACACCT
TACATGGATGAAAATAGTACAATGTTTTATTGTTATATCCAGTGTGTTGA
CTGTTTTGGGAACTGTATTTACTGGAGCAGTGTTCATGAAAAGTTGCTAC
AACAAATGGTCGATGGCTATCAAACTTCTTGTTGttGGTTTCACAACCGC
GGCAGCTGGAATCTTCTATCACAACCATTCCACACTTCTTCCGATGTCTG
TAGACGTCCGTGCGATTCAATATGGATGGTCTTTCCACGCTACAATAGCC
GCCATCATCATTCTCATCGTTTCTTTTATCATACAACTCTTTTCGTTCGT
TTATTTGAGAGATAAAGAAGTTGTGGAAGTTCAATACCAGATGGCGTTGT
AAttGGTTTCACAACCGCGGCAGCTGGAATCTTCTATCACAACCATTCCA
CACTTCTTCCGATGTCTGTAGACGTCCGTGCGATTCAATATGGATGGTCT
TTCCACGCTACAATAGCCGCCATCATCATTCTCATCGTTTCTTTTATCAT
ACAACTCTTTTCGTTCGTTTATTTGAGAGATAAAGAAGTTGTGGAAGTTC
AATACCAGATGGCGTTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042628XLOC_042628-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000247_pilongenomesc0000247_pilon:411672..412629 +
Properties
Property NameValue
Aaloc370-585:743
Aaloc1-366:1