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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:435982..438177- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042626 ID=XLOC_042626|Name=XLOC_042626|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2196bp|location=Sequence derived from alignment at sc0000247_pilon:435982..438177- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAGATGTTGTTGTTCGAACACTAACGATTTTGTTTGCTTTGCTTG
TAGGCTTCGCTGTTAAAAGGATCAGAAAAAGGAATATTGCTCAGTTAAGA
AATAGAACTATTTATGATGGCTTCCAACAAGAAAGAATGTTGAAACTTAT
TGAACTGAAAATGAGTATTAAAGATGTTACGATTCTTAATATCTGGACAG
TCATATTTCTGACACCTCAAATAATAACTGGCATTATAATGATTGTATTC
AATGACCAATTACGAATTTATGACGCTATATTTCGAATTATTTATCTGGT
TTCGAACCCTTTTGTTTACCTTGCGACACAAACCAAGCTTCGAAAGGCTG
TAAAAACTTTATTTGGTACTCATAATAGAATAAACCCTTTGAATCCTGCT
GATTAAAAGTGCATGTGCTAAAAACTAATGACATTATTTATTTCTTGTTA
GTAGCAGCTCAAGAAGGCCGATGGTCAAGGTTTTTTGTAAAATCCAAATT
TTTAGGAAAATGTTTTGAAAATAATATTTTCATACAGTTAAATCTAAACT
ACATTTTTTCCAATAGTTGAATAGACGCTTTTTCGTTTATAAGAACAATT
TTATAAGGACAATGAGGCTCAGAAATTACTCCTTTTGATGCAATTTAGGA
AACCAAATAGTAAAAATTGGGTAAAAACCTAAATCACTTTAATTACCCTA
TATATAAGAACAGGATAAGAACAATTTGAGGCTCAAAGTACCAAAAGAAT
AAGAACAGTGGAGCTTCAGCAAATCTTTACTGGTTCTTATAAAAAGAAGT
GAGATACTTTAGTTGAAATTCTTCATTGAAACGTCCTAAGAAACGAAAAA
TTAAATATTGCCCTTGAATATTACCTAATCTTACCCAATAGCGTAATCCT
ACGTTTTATAAAAACATTTCGATCGAGAGTATGTAAAAAATCTGAAATAT
AATATCAAATTTCAATCTGGTCTTGCATAGAGATCATGCAATTCGACTTA
ATGATAACAAAACCAAGTTTCTTGTTAATACAAGCTTAGACATCACAAAA
AAGATGTATAAAAGTTTTTTTTTGTATGCAGATATTGCTGTTTAACTTAC
TAAAGCTATGGAGGCTCGTGATATCATATGGGATGAAGATCCGTGTATTT
TCATATTCAAAGATGAAATACCTGGAAAAATGAAAATGCACGTGAAGAAC
TTGGATTTGTATGATTGGGTTCGAATTGATGCAACCTACCCAAAACAAAT
GGCTGTAAAGCAGGAATTATATCGGTCCAACATGGATGATATCTTCATTT
CAAGGGTTAATAACCCAACAACAGACCATTGTAAAAAGGAATTCTATGAG
CTGCTCACCGACCATGTTTTGGAACGTTTTCCGGACATATTTGAGAAACA
AGGAGACCATATCTTGAATCGTGTCACTGGTGAATTGATCCCGATCGACC
CTGATGATGAGGAGGAGGAAGATGTAATGTTAAGAGCAGGAAGGTTGACT
CAAGACGATTGGATAATCATGGAGTATGAGGAGAACCAATCAGGTTACGT
TTTGACAGCGGGAAATTTATGCTTTCCCTCTGATTGGTCACTGAAAGAGA
AATTCAACAAACCAATGCAAATGATACATGAACCTGTGAAGCCTTACTTA
AGGCATTTGAAAGATAAAGTTGATTCCTTATTCTTGAGATTGAAAGCTGA
GAATCCACTGTGGAGAGCTAATTGGGGAATATACAGCTCGCTTGACGATA
CATTTGATTTGTTTTCTCATCCTAACAAGAAATTACATACTCAAGGTGGT
TCACGAATTCCCTTTGAAGGTGAAGAAACAGGAAGAAAACTATTCTTAAG
ATGTGAATATCATACTCTAAGAAAGTTGCCAAAGACAGGTTGTATCGTCT
TTGGTATCAGAACCTACATGAGATATTTATCTGATATGAAGAATCAGCCG
AAAGAAGATATCCAAAGTCTTATTGACGCGATTGAAGACCTTGATGAGGA
ATATTCAACTTACAAAGGAGGAGATGTGTGGAAAGTGGCAGCTTTAAAAT
ACCTGAAAATGATTTTGAACGAAAAATCTGGATTGTACTCATTTTCACGA
AATAACATATCATCAAGGACTATTTTAATGTCTGGTGTCTTTGCGGTTGG
TGCTTTTACTGCAATTAAAACTTTTAAGAAATATTTTTATACCTAG Coding sequence (CDS) from alignment at sc0000247_pilon:435982..438177- >XLOC_042626 ID=XLOC_042626|Name=XLOC_042626|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2310bp|location=Sequence derived from alignment at sc0000247_pilon:435982..438177- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTAGATGTTGTTGTTCGAACACTAACGATTTTGTTTGCTTTGCTTG
TAGGCTTCGCTGATGTTTAGATGTTGTTGTTCGAACACTAACGATTTTGT
TTGCTTTGCTTGTAGGCTTCGCTGAGCTATGGAGGCTCGTGATATCATAT
GGGATGAAGATCCGTGTATTTTCATATTCAAAGATGAAATACCTGGAAAA
ATGAAAATGCACGTGAAGAACTTGGATTTGTATGATTGGGTTCGAATTGA
TGCAACCTACCCAAAACAAATGGCTGTAAAGCAGGAATTATATCGGTCCA
ACATGGATGATATCTTCATTTCAAGGGTTAATAACCCAACAACAGACCAT
TGTAAAAAGGAATTCTATGAGCTGCTCACCGACCATGTTTTGGAACGTTT
TCCGGACATATTTGAGAAACAAGGAGACCATATCTTGAATCGTGTCACTG
GTGAATTGATCCCGATCGACCCTGATGATGAGGAGGAGGAAGATGTAATG
TTAAGAGCAGGAAGGTTGACTCAAGACGATTGGATAATCATGGAGTATGA
GGAGAACCAATCAGGTTACGTTTTGACAGCGGGAAATTTATGCTTTCCCT
CTGATTGGTCACTGAAAGAGAAATTCAACAAACCAATGCAAATGATACAT
GAACCTGTGAAGCCTTACTTAAGGCATTTGAAAGATAAAGTTGATTCCTT
ATTCTTGAGATTGAAAGCTGAGAATCCACTGTGGAGAGCTAATTGGGGAA
TATACAGCTCGCTTGACGATACATTTGATTTGTTTTCTCATCCTAACAAG
AAATTACATACTCAAGGTGGTTCACGAATTCCCTTTGAAGGTGAAGAAAC
AGGAAGAAAACTATTCTTAAGATGTGAATATCATACTCTAAGAAAGTTGC
CAAAGACAGGTTGTATCGTCTTTGGTATCAGAACCTACATGAGATATTTA
TCTGATATGAAGAATCAGCCGAAAGAAGATATCCAAAGTCTTATTGACGC
GATTGAAGACCTTGATGAGGAATATTCAACTTACAAAGGAGGAGATGTGT
GGAAAGTGGCAGCTTTAAAATACCTGAAAATGATTTTGAACGAAAAATCT
GGATTGTACTCATTTTCACGAAATAACATATCATCAAGGACTATTTTAAT
GTCTGGTGTCTTTGCGGTTGGTGCTTTTACTGCAATTAAAACTTTTAAGA
AATATTTTTATACCTAGAGCTATGGAGGCTCGTGATATCATATGGGATGA
AGATCCGTGTATTTTCATATTCAAAGATGAAATACCTGGAAAAATGAAAA
TGCACGTGAAGAACTTGGATTTGTATGATTGGGTTCGAATTGATGCAACC
TACCCAAAACAAATGGCTGTAAAGCAGGAATTATATCGGTCCAACATGGA
TGATATCTTCATTTCAAGGGTTAATAACCCAACAACAGACCATTGTAAAA
AGGAATTCTATGAGCTGCTCACCGACCATGTTTTGGAACGTTTTCCGGAC
ATATTTGAGAAACAAGGAGACCATATCTTGAATCGTGTCACTGGTGAATT
GATCCCGATCGACCCTGATGATGAGGAGGAGGAAGATGTAATGTTAAGAG
CAGGAAGGTTGACTCAAGACGATTGGATAATCATGGAGTATGAGGAGAAC
CAATCAGGTTACGTTTTGACAGCGGGAAATTTATGCTTTCCCTCTGATTG
GTCACTGAAAGAGAAATTCAACAAACCAATGCAAATGATACATGAACCTG
TGAAGCCTTACTTAAGGCATTTGAAAGATAAAGTTGATTCCTTATTCTTG
AGATTGAAAGCTGAGAATCCACTGTGGAGAGCTAATTGGGGAATATACAG
CTCGCTTGACGATACATTTGATTTGTTTTCTCATCCTAACAAGAAATTAC
ATACTCAAGGTGGTTCACGAATTCCCTTTGAAGGTGAAGAAACAGGAAGA
AAACTATTCTTAAGATGTGAATATCATACTCTAAGAAAGTTGCCAAAGAC
AGGTTGTATCGTCTTTGGTATCAGAACCTACATGAGATATTTATCTGATA
TGAAGAATCAGCCGAAAGAAGATATCCAAAGTCTTATTGACGCGATTGAA
GACCTTGATGAGGAATATTCAACTTACAAAGGAGGAGATGTGTGGAAAGT
GGCAGCTTTAAAATACCTGAAAATGATTTTGAACGAAAAATCTGGATTGT
ACTCATTTTCACGAAATAACATATCATCAAGGACTATTTTAATGTCTGGT
GTCTTTGCGGTTGGTGCTTTTACTGCAATTAAAACTTTTAAGAAATATTT
TTATACCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:435982..438177 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 64-1155:1093 |
| Aaloc | 1-60:2197 |
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