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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:287491..290093- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042618 ID=XLOC_042618|Name=XLOC_042618|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2603bp|location=Sequence derived from alignment at sc0000247_pilon:287491..290093- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGAAAAAGATCGAAAAATAACATGCTGCGTCCTGGTGATGGTCAT
GGCACGCTTCTCGTTTGCTTTCGCACCACATTCTCTGAGTAAGAAAATCC
TGGTTTCTTAGTAATAATTTATTTTCCGATATATTTTTGAAAATATTCTT
AAAATAAAAGCTTTGCAATTTCTTGGACGAATATATCCAGAGTCGGACAG
TCGGTCCGAGGAAAATTTCCAAGGAGTCTAAAAAACATTTTTCAAGTTTT
CCAGGAGATAAATAGTTCTATTCCTAATCATCTTTAATAGTGGGCCATTG
TAAGAATCGAATGGATGAAATAGAGGAGACACTCAAAGTGGGTCTACTGC
CCAGCATTGAGCCACGTAATCGAATTTACAACCCAAGTGACATCATCAAA
TTTTCATGTCCTGACGATTATTTGCTTGAGGAGCATGGAAAGCTTTCCAA
ATACTTGTGGTACAAATGCACTGTCTTTGGAGTCTGGAACCAGGAACAAT
GGCCTGTTTGTAGAGGTAATTACAACATGTAGTTTGTCATTTTCTCCGCC
ATATTTACATCCTTTAACAACACATCCGTTCAGTTTTTATTTGACGTCAG
AATCATTTTAGGGTGGTAAAGCGGACAAAAAAGCCCGCGCGGTAATTGGC
GGCTACGGTCGAAAACGTGTATTGTTAAAAATGTTGAGGAAGCCAGCATG
GCTAGAACAAGTATATGATGGTTATTTTATTTGGTACAATAATTAAGTGT
CTTTGGAAAGAGAAAGCGAAATTTTTCTTCCTATTTAAGCAGTGATTCTC
CCAATAAAGATGATTGACCTGTTATTAAATTATTTATTCCAAAGGACCTT
ACGAGAACGTCACATGTCATAACGAATATCTCTTCACTCGCCAATCTGAG
AAGTCGTGGTTGAATCCAACACCGAACTTCAAGCATGCTTTATATAAACC
ACCCAATCAAAAAATTTTCAAGCATTTGACCGTCATCAACTTTCAGTGTC
CTTCAGGGATGAACTTCAGAGGTACAAAAGGATTGGTGATCATGCAATCC
AAGTGTGGTAGTAATGGAGATTGGACTCGTGAATGGCCCATGTGTCAAGG
TTTGTCATCTTTTGGACTTTTTCTTTTCATTCGTCGCTTATTCGTTTCTC
TTCTCTATTTCTTTGTGTAGTTTTGATCTCTTTGACACCTTTTCAAACAT
TTAGAGTTTTTTTTAGACTGACTATTGTTTTCATATCTACCCATTAGGAC
TATTTTTTTGTTTAGGTAACACATGTTCCCCATACCGTTTGAAACACGGG
ACTTCCGGTACAGAAGACCGGCTTTTCTCGCCTGGAACATCTGTGCAGAT
CAAATGCCACACACCTCATTTTCATTTGTGGGGAACAAATACGAGTACTT
GTACGAATTCTTTGACGTGGTCCGGCTCAACGAAGCGTGACTGCATCACA
ATGTCACGGTTCCGATCACGTTGTGTGAAGAAAGGACGGATGTTCGAGAC
ACGACACAACAACATACATGGATACTTGGAACCTGTCTGTCATGCACGAA
GTAAGAATCTGTGAAATCAAAACTATTAACATATTCATTTATTTTCACAT
TTCCTCTGCCGCTTTGCAAGTACTCTCGGGTATCTAATAGCCGGGGGGGT
TGGAATAAAAATGTCCTGGGTGGAAAATTTTCGAAAAGGAGGCTAATACA
GCAGAATTAGGGCAAAAGAGGTAATTTTCAAAAAAAATTTCCCAAAAATC
AATAAGCGGGGAGGCGGGAATACGAATGTCCTGTGTGGAAAATTTTCGAA
AAATTGATTAGCGGCCATTAGGTACCCGAGAGTAGTTGCTATACAAAGAT
AGACTTCCGGACTTCTCATTTCACTCATCATCAATTGATTTAGGTCCGAA
GGGGCCTAGGTCAATATCATTTCATCTCTGAAGTTTTCAAGATCCATTCA
TTCATTCATTTCTCCAGGGGTAGCCCATCACGAAGAAATGCGTCGCGAAG
AAGCCGAGGGAACACGTCGTATCATACTGGCGTCCGCCGTTCCCCTTTCC
GTACTTTTCTTCATTTTCCTCACGATAAGTTCTGTTTACGTGTACCGCTT
ACGTCGACGTAACCGTATGCTGTCTTACGCCATACGTTACCAGAATGAAG
ATAACGTCATTCAAATGTTCCTACCGTCCTATGAGGACGCCTTGAAGAGC
AAACCGACCACCCCACCACCCTCTTTCGATGAATCATATAGTCTCCTGCC
GCCCAATGAGCGAAGTGAGTTTTATACTTAAAAGTCTTTTTAAATTCTTC
AATATGATACTTCGTTATTCGGCAAGAGAAATTTCATAATTACTCGAAAG
TTTTCTTTTTCTTTCCGAATTTCTGTCACCTTGTAAGTATATGTATTTCT
TATCGGGAATGTTTTGATTAGAAATATCGGTACTTAATTTACTCTCTTTT
TCTCAAAACATAGCTTTCTCACTGAGCTCATCTTCAAGTCATCATCATGA
AAACGAATCATCTTCACCGAGGGCGTCATCAAGCCTAAGGGCGCCCTCTT
CCCCGCCGCCCTATGTTGCTGATGACAACCGAGAAGAAGATAATGAAGAA
TAA Coding sequence (CDS) from alignment at sc0000247_pilon:287491..290093- >XLOC_042618 ID=XLOC_042618|Name=XLOC_042618|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000247_pilon:287491..290093- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTGGAAAAAGATCGAAAAATAACATGCTGCGTCCTGGTGATGGTCAT
GGCACGCTTCTCGTTTGCTTTCGCACCACATTCTCTGAATGTTGGAAAAA
GATCGAAAAATAACATGCTGCGTCCTGGTGATGGTCATGGCACGCTTCTC
GTTTGCTTTCGCACCACATTCTCTGATGGGCCATTGTAAGAATCGAATGG
ATGAAATAGAGGAGACACTCAAAGTGGGTCTACTGCCCAGCATTGAGCCA
CGTAATCGAATTTACAACCCAAGTGACATCATCAAATTTTCATGTCCTGA
CGATTATTTGCTTGAGGAGCATGGAAAGCTTTCCAAATACTTGTGGTACA
AATGCACTGTCTTTGGAGTCTGGAACCAGGAACAATGGCCTGTTTGTAGA
GTGGGCCATTGTAAGAATCGAATGGATGAAATAGAGGAGACACTCAAAGT
GGGTCTACTGCCCAGCATTGAGCCACGTAATCGAATTTACAACCCAAGTG
ACATCATCAAATTTTCATGTCCTGACGATTATTTGCTTGAGGAGCATGGA
AAGCTTTCCAAATACTTGTGGTACAAATGCACTGTCTTTGGAGTCTGGAA
CCAGGAACAATGGCCTGTTTGTAGAGGACCTTACGAGAACGTCACATGTC
ATAACGAATATCTCTTCACTCGCCAATCTGAGAAGTCGTGGTTGAATCCA
ACACCGAACTTCAAGCATGCTTTATATAAACCACCCAATCAAAAAATTTT
CAAGCATTTGACCGTCATCAACTTTCAGTGTCCTTCAGGGATGAACTTCA
GAGGTACAAAAGGATTGGTGATCATGCAATCCAAGTGTGGTAGTAATGGA
GATTGGACTCGTGAATGGCCCATGTGTCAAGGACCTTACGAGAACGTCAC
ATGTCATAACGAATATCTCTTCACTCGCCAATCTGAGAAGTCGTGGTTGA
ATCCAACACCGAACTTCAAGCATGCTTTATATAAACCACCCAATCAAAAA
ATTTTCAAGCATTTGACCGTCATCAACTTTCAGTGTCCTTCAGGGATGAA
CTTCAGAGGTACAAAAGGATTGGTGATCATGCAATCCAAGTGTGGTAGTA
ATGGAGATTGGACTCGTGAATGGCCCATGTGTCAAGGTAACACATGTTCC
CCATACCGTTTGAAACACGGGACTTCCGGTACAGAAGACCGGCTTTTCTC
GCCTGGAACATCTGTGCAGATCAAATGCCACACACCTCATTTTCATTTGT
GGGGAACAAATACGAGTACTTGTACGAATTCTTTGACGTGGTCCGGCTCA
ACGAAGCGTGACTGCATCACAATGTCACGGTTCCGATCACGTTGTGTGAA
GAAAGGACGGATGTTCGAGACACGACACAACAACATACATGGATACTTGG
AACCTGTCTGTCATGCACGAAGTAACACATGTTCCCCATACCGTTTGAAA
CACGGGACTTCCGGTACAGAAGACCGGCTTTTCTCGCCTGGAACATCTGT
GCAGATCAAATGCCACACACCTCATTTTCATTTGTGGGGAACAAATACGA
GTACTTGTACGAATTCTTTGACGTGGTCCGGCTCAACGAAGCGTGACTGC
ATCACAATGTCACGGTTCCGATCACGTTGTGTGAAGAAAGGACGGATGTT
CGAGACACGACACAACAACATACATGGATACTTGGAACCTGTCTGTCATG
CACGAAGGGTAGCCCATCACGAAGAAATGCGTCGCGAAGAAGCCGAGGGA
ACACGTCGTATCATACTGGCGTCCGCCGTTCCCCTTTCCGTACTTTTCTT
CATTTTCCTCACGATAAGTTCTGTTTACGTGTACCGCTTACGTCGACGTA
ACCGTATGCTGTCTTACGCCATACGTTACCAGAATGAAGATAACGTCATT
CAAATGTTCCTACCGTCCTATGAGGACGCCTTGAAGAGCAAACCGACCAC
CCCACCACCCTCTTTCGATGAATCATATAGTCTCCTGCCGCCCAATGAGC
GAAGGGTAGCCCATCACGAAGAAATGCGTCGCGAAGAAGCCGAGGGAACA
CGTCGTATCATACTGGCGTCCGCCGTTCCCCTTTCCGTACTTTTCTTCAT
TTTCCTCACGATAAGTTCTGTTTACGTGTACCGCTTACGTCGACGTAACC
GTATGCTGTCTTACGCCATACGTTACCAGAATGAAGATAACGTCATTCAA
ATGTTCCTACCGTCCTATGAGGACGCCTTGAAGAGCAAACCGACCACCCC
ACCACCCTCTTTCGATGAATCATATAGTCTCCTGCCGCCCAATGAGCGAA
CTTTCTCACTGAGCTCATCTTCAAGTCATCATCATGAAAACGAATCATCT
TCACCGAGGGCGTCATCAAGCCTAAGGGCGCCCTCTTCCCCGCCGCCCTA
TGTTGCTGATGACAACCGAGAAGAAGATAATGAAGAATAACTTTCTCACT
GAGCTCATCTTCAAGTCATCATCATGAAAACGAATCATCTTCACCGAGGG
CGTCATCAAGCCTAAGGGCGCCCTCTTCCCCGCCGCCCTATGTTGCTGAT
GACAACCGAGAAGAAGATAATGAAGAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:287491..290093 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1153-1290:139 |
| Aaloc | 856-1149:635 |
| Aaloc | 571-852:1337 |
| Aaloc | 316-567:1758 |
| Aaloc | 91-312:2312 |
| Aaloc | 1-87:2604 |
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