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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:292299..298036- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042617 ID=XLOC_042617|Name=XLOC_042617|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5738bp|location=Sequence derived from alignment at sc0000247_pilon:292299..298036- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGACAGTTTATGGCTGCTCTTTGCTATATTTGTTGGACCAATACA
ATATGTGCAGGCAGGTGAGCTAACTTTTTTAGTTTTTAAACCTGTTATAG
CTTAGTTTAATACTTGAAAATAAGTATTTATTCTGAAGCTTTGACTGAAA
GCTTCGATTTTTGTTTTTACATTCACTGTATGAAATGCCAACCATATACG
AAAAATTTTTGCTCTAATTTGTTTGTTTTTTCAGTTACTAATCGATGTCC
AGATCCTTTATCTGTCATCCAAGCACCTCGGCTTGCACAAAGCAATGCAA
TGAGGGATTATGGCAGATGGAAGTATGGCTTTCGTATCACATACACTTGT
GCACCTGGACACAAGTTTCCTGATGGTAGAACAAAGAAATATACAAAATG
TGTCATAATTAATGGAAAGTTAGATTGGAGCATCAAAACATTTCCTAATT
GTTATGGTAAGGAATTTGTTTCGGTAATCAAAAAAGACAGGATACACAAA
ATTTCAATGGACAGGCTGCTGAAAGTGCTTGATCTACCTTTTAGTGTGAG
CAAGGTCATTGGTCATTTTATGTCTCAAAATGACCAAATCTTGATTTATC
AAAAATTCTTTTTAGTTCGCACTATCATTTACTCACAATAATTTCAAATT
GAGTCACTGAATTCTGTGTTGAAAGATTAGAACCTTTATAGGTTGATATA
ATCATAAAATTGCCTTCTTTTCCAGATTACTGCCAAGGATCCCGGTGTCT
TCATGGTCGATGTCAATTTAACAAATTCCTTGGAAAATACAAATGTAATT
GTCTTGATCATTATGGCGGGCGCTTCTGCAATCAAGGTAAACAAAATAAA
GTATTGTTTCCTTTGGTGTAAATGGCTTTTAATACTTTCTAATTGCTGTA
TTTAGTTTCCTGAGTACCAGTTGGATTTCGCAAAAACCACATTTGAAAGA
AAGTGAGATTAGAGCCAGCTGAAAATGTAAAAATTATTTATTGATAGATT
GGAAAGCAAAATACATCTTTATTATAAATCTGGTTTGATTTACATATTTA
TAAAAATTTAAAAATATAGTAAAAACTGTATAGTTATAGAAATATTAGTC
TCTCTTTTTGGACCTACCTTGGAAGTCCGATTATCGAAAAAAAAATTTGT
TTGGGCAAACTTGGGCCAAAAAATGCCTCAAAATGAGGTTTTCTGGACTG
AGTGAAATTGCTTCATTAGTTTTTCTGATTTTTTACACAGTTATGCAAAA
TGGTAATTCTTAAAAATGTGAGACTTTTGTGGCAAATTTTGGCCAATATT
CGGATTTGTGAAAGTTGCTTCATTCAATTTTATCTTCAATGAGTTAGAGT
TATCTTTACAGGAAAGAAATGACTGTTTATGTTTATGCCCTAAACTCCTT
TGGGCTGCTTATCTCTAAAACATTGGAAAGCTAACATGAAACAAGTTGCA
TCATGCTTTCAAGCTTACGCATCTCTATGCTATGCTGTTATTATTTCTTT
TTCGTTCGAACATTTTCATTTTCATTCAGCATGTTTCCAACTACCTATTT
TATTCAGCATGTTGCTTGTTATGTTTCATTTTAATTTTCTTTATAGTACT
TTCAGTACTTACTTTCCTTGAGGTCAGATCTCTGATATAATTAGCAAAAA
AGTCTCTTTAAAGCATTGTTATAATGAAGTAAAGAAGATTGAAACATCTA
TATTGTTAACCGGTTACTTTTTCGAAGCGGGCTACACGACTTTTTGCGCA
ATGCAATTGGTTCTTTTCGCATGACGACGGGCCTACATTGTCCAGAGTTG
CCCGTCGTTAGGAAAATTCATTGTGACGTCACGTTTTCAAAGGAAAATGA
ACAATGCGTTGACATAATTTCTCTCATTTTTTATTTCTGACGTCAGAAAT
TATAATAATTTTTTATCTCTTTTCGCTCGTTTTTTTCGCTTTATGTCGCT
ATTTTTCCTGGATAAAGCGCTAAAAATCAACCGAAGCTGAAGGAAACGGT
CAACAAATACAATAATGACCGGTTTTTTTCGGGCTGTACTGAAAATATTG
CCCTCGGTCAACGCAACAACCTCGCAAGCTCGGTCGTTACTTGACCTCGG
GCAATATTTCTCAGTAAAGCCCTCGCTAACCGGTCATTATTGTATTTTTA
ATGACCATTCAATTTATTTATTCAGAGAAGTGTGATCTGCCAACAACAAC
CGAAATACCAAACGGTTCTCACAATGGAAGCATGTCATACAGCTACATCT
TACATGGTCTCAAAGAAGGTGCACAAGTTCATTACCGGTGCAACACTGGC
TATCGAATGATCGGTGATAGCATGAGCACGTGTATGAAGAGTGGTATTTT
TCATCCACCCTCACCACAATGTGTTAAAAGTAATAGTTCAATACCTGTTT
TGTGTCGATAAACTGACAAATACTCCTTTTTTGGTTTGCACTTCTCTGCT
GACATTAGAAAACTTTGAAACATACTTTTAAAGAAGGCCAGGGATTATCA
CTCCTACAAGTAACAAATTGATAACTTATCATATAGTGAATTTTATCTTA
ACTTTCACCAATTTTCAACTGAAGTCGTTTTAAACTTTCAGATGAATCTT
ATTGGCATCTTTACGAATGCCAACGCCAGTATGACAAACCAACCATGAAA
GAAACAGCACTTTACAAACATGCCATGTTGACAGCACCACATTACTGGTG
GGGAGGTATTATCGGTTTCAGTTGTCGTAATCCCACTCAAGTCTTGGTGG
ATTATAAAGATCGTCCTTTTCATGGATCAACAAAGTGTCAAAATAATTTA
CAATGGTCTCGACAATGGCCATTGTGTAAAGGTAGTTCATTAAAAGATGA
GAAAATAGCTTCACCATAATTTTCATTCCTAGGATACCGATAAATAAAGG
GCTTCTTAGTTTTCTGCTTTACGCGCTTATGTATTTTGTCTAAATCCCTA
AGAATGTTAGAATATTCTCCAAAGCCTTCTACAGTGTTTAAAGAAATAAT
TTAAAAAAGTGTATGTTGAGTAAATTCGTGTAAGAAATATTTAAAAAAAA
TCTGACTAATGGGAGAAAGGTATCTAACTCAAAATTTAATACATGGGGTA
TTGCAAAGCAAAAGATATGACATTTGTTGTGATTCTAAAGTGGTCGATTG
TAATAAAAGTCTTTCATTCTAGTGCGCACTTGCCAACGACCAATATTAGA
CCGTGGAACTTTCACTTGGATCAATGATCTAGATGGCTTCTTTGTTGACT
CTGTTACTTTGGTAACGTACAAATGTTATTCACCATACTATTTGTACGGT
AACCGACATGCGAAATGCTTGAATGGGAAATGGACGTCTGTTCCAAAATG
TTACAATTTCGAAGCGTTCAAAAACCAATGCATGCTGGATGGGAAAGTTT
TGGATTTCCAAGGATACAATAAATCTGAACCAGTGTGTGCCAAATCCAGT
AAGATTCTAATCCTTTCTAATGTTTCCTTTTGTCATGCTTCGACTAATGA
AGTTTTCATATTCGAAGATTTTTTGGGTATTATTTTACTAGAACGAAAAC
AGGCTTTTGGTTTGTGAATTTCAAAACTATTGCAAAGTATGAACATGCAT
TATATTATTGAAGACTTTTGACACAACTCCAGTATCCTGTTTTTCTTAGC
TCTAAAATGCTACCATTTTGAAATTGAAAAAGGAAAAATAGTTTTGAGAA
GTGTTATGTCATCATGTTACTAAACCTCTTAGCGTATACTGAATGTAAAC
CCACTTTACTGGACAATAAAAAATCCACAGCGTTGTGGATAGAGAGGTTT
TTTATGTTTTTTTAAGCTACTTAACTTCCGCCAATGAACGATTTGCGTAA
TGGATCACGTCTACAGATTCGAACGTTTGCTTCCATAATGGCGGAAATTA
TGTAACCTGAAAAACCTTTCTTTAAACTATGATCACCTTCAGGTTACCTG
ACGGACGATGAAGCTGCGAAGAAGCAGTTGAAGACGATCACAGTTGTGAC
GTCAACTGCTGCAGTGTTGTTCGGTATTTTACTCATCATTGTGGCCGGTG
TCGCTTTCCAACGAAGAAGACTGCTCTATCGTATACGAAGGTAAATACTT
GTTGTCTATTTTTCCAAAATTATTTTTACTGAAATTCCTTTTATTAAGAA
AGTGTTTTTTTGGACCACGTGAAAGACATTTTTCTTTTCTTTGTCTTTGC
GGTCGATCGTCGATCGTCTAGAGATAAAATCTTTTTGTCCGGAAGGTTCA
CGTAAATCATTAAATAACTTCTGGAAGAGTCCGGAGTTCATTCTTATTCC
TACAACTGAAAAATCATCATAAGGTCAATATTTTTCCTTAACTACTTCCG
AGCTAAATTATTTTCTTTTAATTTTCCCTCGGTTAGATTATCTAAAGAAT
CTTCTTTGAAACTTTTTGCGTGCGAAGAATTAAATGGTTAATGAAAAATT
AACGAGTATTTTGTGGCCGTCATTGTTCACCAGGTTGCAAGAAGCTCAAA
CGGTGGAGAGAGATCAGCGAGACATGGACCATGATGTATACATGCAGTTC
GTATTACCCTCTTATGATGAAGCACAGAAAAGCAAACCTACATCCTTACC
TCCTACTTTCGATGAAGCGACGCGGGCTGCAGAGGAGGAAGAAGAACAAC
AACAAGGCGCAACTGCAGGTAACTTTTTGATTATATAGTTTAAAGCTCTT
CCGAAACTTCTGCATAGATAGGTCGCATGCACGGTTTTTATAAGAACATA
AGGCTTCGATGGACAAAATGCTAAGAACAACTTAAGAACATTTAAAGGCT
TTAAATTCAAAAAGTTAAAAACATAAGAAGCCTTCAAGAACTTAAGATAT
CTTATAAAAAAGCGTGTATTATTGTACTTAATTATCGCAGGGAGTTTTGT
GAAAAAGTTCTTTGAACTAGGATTCTTTATTTTAATAGAGATGGCGAAAA
GATGTAATTTAACCTTGTTGTGTAATTCAATAAAATGTGACTGTCTGTAA
GAAAAGGATGCTCGCTATATCAGCAAATAACCGTTTGAACAATGTTTGAT
TAGATCAATAAAAAACGATTTGTATCTTTTTAAGTATGAAATTTGTGGTT
TTTAATACTCATTGAAAATTTTTAAATGATTCACTCACAACGTTTAATGT
TTTAGTAGTTATTGACTTTTCTTGCACGAACTCGATAGGAAGTTTAAAAA
ATGCAGAACCTTATCCACGTGGATAGCAGCGGATGGAAGTAACAGTTTTT
TATTGGTTTGGTGTGTGGATGTTCTTTTTTAACTTGACAAGTAAATTCTC
TACCTAGTCGAATGTTTTCATCGTGGTCTCTTTCAGCTAAAGCCAAAAAG
AACTGTTGTTGATACGCTGCTATCCACGTTGATAAGGTTCTGCATTTCAT
AAAATCTTGTTTTCATTTTTGTTTGTTTGGGTTTTTCAATAATTTCCATT
GCAATTCTTTATTCCTCCTCTTTTAAAATGGTCATTCAAAAATGCGTTCA
AAATGGACATTGATCTTTTTAACATGTTTTCTCACTTTTTTCAACATCAG
TGATAGCGCCTTCATATTCAGTTGCCGAGGATCCGGCGCCCCCGCCCTAT
GATTTAACCAGAGAGCAGCAAGGACAAGAAGGGTCCGACACTTCCCACAT
CCTACCTACGATTGGCTCAACGAGTAGCTCGGATGAATCAGATCATTTCG
ACCTCGGTGTTTATTTGGATGACGCAATGTTACTGTAA Coding sequence (CDS) from alignment at sc0000247_pilon:292299..298036- >XLOC_042617 ID=XLOC_042617|Name=XLOC_042617|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3276bp|location=Sequence derived from alignment at sc0000247_pilon:292299..298036- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTGACAGTTTATGGCTGCTCTTTGCTATATTTGTTGGACCAATACA
ATATGTGCAGGCAGATGTTTGACAGTTTATGGCTGCTCTTTGCTATATTT
GTTGGACCAATACAATATGTGCAGGCAGTTACTAATCGATGTCCAGATCC
TTTATCTGTCATCCAAGCACCTCGGCTTGCACAAAGCAATGCAATGAGGG
ATTATGGCAGATGGAAGTATGGCTTTCGTATCACATACACTTGTGCACCT
GGACACAAGTTTCCTGATGGTAGAACAAAGAAATATACAAAATGTGTCAT
AATTAATGGAAAGTTAGATTGGAGCATCAAAACATTTCCTAATTGTTATG
TTACTAATCGATGTCCAGATCCTTTATCTGTCATCCAAGCACCTCGGCTT
GCACAAAGCAATGCAATGAGGGATTATGGCAGATGGAAGTATGGCTTTCG
TATCACATACACTTGTGCACCTGGACACAAGTTTCCTGATGGTAGAACAA
AGAAATATACAAAATGTGTCATAATTAATGGAAAGTTAGATTGGAGCATC
AAAACATTTCCTAATTGTTATGATTACTGCCAAGGATCCCGGTGTCTTCA
TGGTCGATGTCAATTTAACAAATTCCTTGGAAAATACAAATGTAATTGTC
TTGATCATTATGGCGGGCGCTTCTGCAATCAAGATTACTGCCAAGGATCC
CGGTGTCTTCATGGTCGATGTCAATTTAACAAATTCCTTGGAAAATACAA
ATGTAATTGTCTTGATCATTATGGCGGGCGCTTCTGCAATCAAGAGAAGT
GTGATCTGCCAACAACAACCGAAATACCAAACGGTTCTCACAATGGAAGC
ATGTCATACAGCTACATCTTACATGGTCTCAAAGAAGGTGCACAAGTTCA
TTACCGGTGCAACACTGGCTATCGAATGATCGGTGATAGCATGAGCACGT
GTATGAAGAGTGGTATTTTTCATCCACCCTCACCACAATGTGTTAAAAAG
AAGTGTGATCTGCCAACAACAACCGAAATACCAAACGGTTCTCACAATGG
AAGCATGTCATACAGCTACATCTTACATGGTCTCAAAGAAGGTGCACAAG
TTCATTACCGGTGCAACACTGGCTATCGAATGATCGGTGATAGCATGAGC
ACGTGTATGAAGAGTGGTATTTTTCATCCACCCTCACCACAATGTGTTAA
AAATGAATCTTATTGGCATCTTTACGAATGCCAACGCCAGTATGACAAAC
CAACCATGAAAGAAACAGCACTTTACAAACATGCCATGTTGACAGCACCA
CATTACTGGTGGGGAGGTATTATCGGTTTCAGTTGTCGTAATCCCACTCA
AGTCTTGGTGGATTATAAAGATCGTCCTTTTCATGGATCAACAAAGTGTC
AAAATAATTTACAATGGTCTCGACAATGGCCATTGTGTAAAGATGAATCT
TATTGGCATCTTTACGAATGCCAACGCCAGTATGACAAACCAACCATGAA
AGAAACAGCACTTTACAAACATGCCATGTTGACAGCACCACATTACTGGT
GGGGAGGTATTATCGGTTTCAGTTGTCGTAATCCCACTCAAGTCTTGGTG
GATTATAAAGATCGTCCTTTTCATGGATCAACAAAGTGTCAAAATAATTT
ACAATGGTCTCGACAATGGCCATTGTGTAAAGTGCGCACTTGCCAACGAC
CAATATTAGACCGTGGAACTTTCACTTGGATCAATGATCTAGATGGCTTC
TTTGTTGACTCTGTTACTTTGGTAACGTACAAATGTTATTCACCATACTA
TTTGTACGGTAACCGACATGCGAAATGCTTGAATGGGAAATGGACGTCTG
TTCCAAAATGTTACAATTTCGAAGCGTTCAAAAACCAATGCATGCTGGAT
GGGAAAGTTTTGGATTTCCAAGGATACAATAAATCTGAACCAGTGTGTGC
CAAATCCATGCGCACTTGCCAACGACCAATATTAGACCGTGGAACTTTCA
CTTGGATCAATGATCTAGATGGCTTCTTTGTTGACTCTGTTACTTTGGTA
ACGTACAAATGTTATTCACCATACTATTTGTACGGTAACCGACATGCGAA
ATGCTTGAATGGGAAATGGACGTCTGTTCCAAAATGTTACAATTTCGAAG
CGTTCAAAAACCAATGCATGCTGGATGGGAAAGTTTTGGATTTCCAAGGA
TACAATAAATCTGAACCAGTGTGTGCCAAATCCAGTTACCTGACGGACGA
TGAAGCTGCGAAGAAGCAGTTGAAGACGATCACAGTTGTGACGTCAACTG
CTGCAGTGTTGTTCGGTATTTTACTCATCATTGTGGCCGGTGTCGCTTTC
CAACGAAGAAGACTGCTCTATCGTATACGAAGGTTACCTGACGGACGATG
AAGCTGCGAAGAAGCAGTTGAAGACGATCACAGTTGTGACGTCAACTGCT
GCAGTGTTGTTCGGTATTTTACTCATCATTGTGGCCGGTGTCGCTTTCCA
ACGAAGAAGACTGCTCTATCGTATACGAAGGTTGCAAGAAGCTCAAACGG
TGGAGAGAGATCAGCGAGACATGGACCATGATGTATACATGCAGTTCGTA
TTACCCTCTTATGATGAAGCACAGAAAAGCAAACCTACATCCTTACCTCC
TACTTTCGATGAAGCGACGCGGGCTGCAGAGGAGGAAGAAGAACAACAAC
AAGGCGCAACTGCAGGTTGCAAGAAGCTCAAACGGTGGAGAGAGATCAGC
GAGACATGGACCATGATGTATACATGCAGTTCGTATTACCCTCTTATGAT
GAAGCACAGAAAAGCAAACCTACATCCTTACCTCCTACTTTCGATGAAGC
GACGCGGGCTGCAGAGGAGGAAGAAGAACAACAACAAGGCGCAACTGCAG
TGATAGCGCCTTCATATTCAGTTGCCGAGGATCCGGCGCCCCCGCCCTAT
GATTTAACCAGAGAGCAGCAAGGACAAGAAGGGTCCGACACTTCCCACAT
CCTACCTACGATTGGCTCAACGAGTAGCTCGGATGAATCAGATCATTTCG
ACCTCGGTGTTTATTTGGATGACGCAATGTTACTGTAATGATAGCGCCTT
CATATTCAGTTGCCGAGGATCCGGCGCCCCCGCCCTATGATTTAACCAGA
GAGCAGCAAGGACAAGAAGGGTCCGACACTTCCCACATCCTACCTACGAT
TGGCTCAACGAGTAGCTCGGATGAATCAGATCATTTCGACCTCGGTGTTT
ATTTGGATGACGCAATGTTACTGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:292299..298036 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1453-1638:187 |
| Aaloc | 1267-1449:1255 |
| Aaloc | 1120-1263:1795 |
| Aaloc | 844-1116:2565 |
| Aaloc | 604-840:3146 |
| Aaloc | 400-600:3562 |
| Aaloc | 289-396:5012 |
| Aaloc | 67-285:5503 |
| Aaloc | 1-63:5739 |
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