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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000247_pilon:362395..367106- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042614 ID=XLOC_042614|Name=XLOC_042614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4712bp|location=Sequence derived from alignment at sc0000247_pilon:362395..367106- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTGTCAGATTTGGAATTGACGAAAACAAAGCATAGAAGTGCAAT
ACAAAAAATTCTTACTTCGTTACAGGGAAATTTATCCAGGATGAACTTTT
GGACATTCATCTTGGTTGCCATAGGTTACTTGGTAGCCAACCCAATCATC
GCACAGCAAGGTGAGAATGTTTGTTCGTTTCCAAGGAAGGTTTCGGTTGG
AAGGACCGACGTTCAGCTGACATCTATAAAATGCAAAGGCATTCGACATG
GAAAAAAATAATTTCAATTGCTTACCTGAAAGAACATAAAAAGTATAAAA
TACACCACTTTTCTGACGTCACAAGTTATTAAGTGAATCTGTTATTAATG
GTTTTATTTTCACATAGGTGTTCCCGTTTCATATTAGACACATATTTCAT
ATCAGGACAGTGTCTGCTTATTGTTATATTAATCAGATATAAGCAAAAAA
ATGTTTTTCTTTTCCTCTTTCATATACATCCGTGTCAATCCAATGTGAAA
AAAGCTTGTAAATTAAAATTGATGAGTAAACAAACGATATCACTCTTATT
CAAAAACAAAACCTTTAAGTTCGAAACGTTTGAGATCAATTCACATAACA
TTTTTTAACAAAGTGAAGAAGTTTTGGTTCTTTATTCTACATCGACTGAA
CTCAAAAAATATATAATTTTGACCTGTCATAGTTGACGGTGGTTACGGAC
CATGGTCTGAATGGACGCCTTGTGAGGTCACGTGTGGAGATGGACTGCAG
TATAGAGAAAGAGGTTGCAATGAACCTTCACCGTCAAATAGCGGATTGGA
TTGTGAACATCTTGGACCTGCTTCAGAAACAAAACCGTGTCGTTTGAGAT
CGTGTCGCGGTGAGTTTAGATATTAGATGAAAGGAACTTTTAATACTCTA
CCAGTCTAATTTTCATTTTAATCGAATCTACCTTTACCAGAAATTACGCT
TGTTACCCGCAAAATTACCTTAAACATACAATCTCTCGTTTCCCAAAAGT
GTTCTAATGCTCAAATACTCACAAAACCAGAGTTCATTAGACAAAGTTTA
TCTTTATTCTTTCAGGTATCGATTTGAAAAGAGGCAATTTCTTGAAATCA
GTGGACATCCAGAAAACATATCAATTTACATTCGAAATCAAGCCAACCGG
TATCAAAGAAGGCTGGACAAACGTTTTCCATGGGTATAATTTGGACGGTA
ATTGTTGTCATTTTGGGCAACGTATACCTGCTCTCTTCATGAGATCAAAT
ACATCACGGCTAATGACCGTTGTACCTGTCGGCAACAACAGTAGGTACCA
AGTCAATGAATGGCTCCCCATGCATGAAGCCACAAACGTTACAATTAGAC
AATCGCTTCGTGCAGATGGAACCTACAGATTTGCTTTGTACTACAACGAG
ACTCGCATTGACATGAGTGTAAATACAGAACCAAGAGTTTATAAAAATGT
CTCATTGTACGCATCAGATAAATGGTATCAACCATCTCAAGTTGAACTTG
GATATTTCAATGTCGAAAGTCCTATTGAACCTGACTGTAAGTATCAATCT
TTCTTTTGGAAACATAGTCTGATAGAAATAGCTTAAACAAGGTTCGAACC
TTTCAAATAAATCATATGTGGTTGAAATTTGGCGCAGAGGTTTCTTTTGG
GTTCAAGAACCACCAAGAAAAACCCCCAAGGCGATTTAAAAAGTTTTAGA
CCCTTTTTTTAGGGTATTTCATGGTGACGTCAATGTTCAGTACAATTAGC
CACTGGAACGAACAAGAATCTCAAAAACACTTCGACTGTTTTTATCTGAA
AGATAATGAAAATTAGATAACGAAAATCGCGTTAAATTTGCGTCAATTAG
AAAAACTGACCTCCAGGCAGAAACTGTTTGAGTAGTACTGTACTCACCAG
AGCTAAATGTGCCATTGCAGCAAACAAAAACCAAAATTGTCTTGAGATCT
AAATCACAAACACTCCTCACATTGAGCTCATTTCTTTCTTGATTTCTCAA
CAGATTTCAAACCACAACGTGGCTTCATCCGCCAACACATCCCACTGATG
GATAGAACCTATGAAATTTCGTTCACAATTCAACCAAACAAAGCTCACTA
TGGAAACGAAATAAACGGCGTCTTTAGAATCTCTCATAATGAAACTTTAG
GAAGTAACTGTTGCAAGAAAGGTAATTACTTATGATTCTTCGGGCTCGGA
TGTACATAACTCGAATGTATCCTTAACTCGGACAAGTTTGCTGGCCACTT
CATCTAACAATGCCTTATAAACCTTACTCCATATGGAAGACTCAACTGTA
TTTATAATCCAATGGTATTCGCACGTCTTCATTCGGGTCCAATAGAAAGA
ACCACATATGATCATGAGAGAAAAAAAGAACATAAGTTTCATTCAATAAC
GACATTTTCTAGGTTCCAACATTCCAAACTTGTTGATCACCGACAGATGC
AAATTATACATCCTAAATGACGGTAATAAACCCGTCAGTCGAACATTGAA
CCCCTTCAGAATGACGTCAGTCAAGATTAGACAAGAGTTGACGTCATTTG
GTTTGTACAGGTTAGTGGAGTTCATTTCTATCTTAGAAAATTATTTATTT
AACTAACCGAAGGAGGCTTTGCGAAAAGAAGTTTTAAAGTTTTGTTAAGT
TACGTAACTTCAACCATTATGGACGCAAACGTTCGAATCTGTAGATGTGA
TCCCTAGCGCAAATCGAACGTTTGCTTCCAAAATGGCGGAATCTGCGTAA
CTTAACAAAACATGGAAAACCTTTAAAAGAGCTTTTAAAAAAATGCTATG
TGATTCTAAAAAGAGAGAACAGAGGCTTTCATCCGACCGTAATACGAATT
TCGTGTGCAAAACTCTACGTTAAAAGGTGTCAGGCTCAAATTTGATTATT
ACTTCAAGTAATTTGCACTTCTGTTAAAAGCGCTAGAACTCTGATTAATA
AATATGTGTTTTAGTTACACAATCCACTTGGATGGGAAAGAAGTTCACCA
AGTTTTCAACCAGAACCCTGCAACATACAAAGGAAACACTTTATACACCA
GTGATCCATATCACAATGCAGCTGACGTCATCGTTCAAGACCTCAAGATC
GTCTCACCTCTTCCAATGAACGGTAAGAAGTTGCAGTGCATTATGGGAAA
GTAAGTCTGCGACCCGAAGGCTCCTCTTTAAATGGCTATCTACCCGAAGG
TAGGGAAGGGCGCCACTCTTTCTCCGTGGATTTCTCCACTTACCCTTGAT
CCTTTTCTTAATTGTTGAGCATCAAGCAGAGAGGCATCAAGTACCATTTT
GAGAATATTTGGTATGACCCGGCTGGGGAACCCACAACCTTGCGAGCCGT
AGCCGGATGTTCTACCACTGCACTACGGTCGCAATCATCAAGTTTAGCCT
GAAGGCCTAAAGAGGAATCCTCTCAACTCTCTCTCAAGCAAGAAAAGGTG
AAGCCTAGATTTGTACAGCTTTCAGAAGGACGGAATGATCGAATCTAGCG
CTTTCTGGCGAAAGTTTTTAATTTCAATACGCCCCTTCTAACAGACCCGG
AAGGGTGTTGCATTGCACAAACGCGGAAAAAAACTTCTCATGTCCCCAAG
CCTTTAGTGTGAAACCCACGCCGGTCACGCGTTTCGAAAGGGAGATAAAT
GGCTTCATTTCCCAATCAAACGTTTCATCTGTTAGCCCCCTTCAGGTTTT
TAAATTCAACGTGTGCAATACATGGCTGGGTTCGTCCAGAAAGCTAATGA
TTGATTAACTCTACAAGATTGGTGACATACATATCGAACAATATGGTCTT
CCTCTTTTAGTGTACGTACCAAGGAAAAACAATTACATCACCAACATTCC
TGTGGTTGAAAAAGCTTTCCGCTACACAATGGAAATCAAACCTGTCGGTG
TTCGCCCTGGGTGGACGAGCATCTTCCACGCCACCAGGAACGTGAAAGGG
AATCGAAACTGTTGTGGGTATGGAAGTCGTATTCCTGCTTTATTCTTTCA
TTCCAACACAACCAAGTTACATACCACAGCCTCCATCAATGGTAGAGGTA
ACTTTTACATTAACAACGATATGGATATGGATCGATTCACTGTAGTGACA
ATTGAACAATCGAGACAACATGACGGTCAATATCGATTCTCATTGATGTT
TGACTACATCGAGGTAAAAGAAAGAGATTTGGTTTTCTTCATTTTATACA
CACAAAAATATAAGCTCATATGTCTTGCAGAAAAAAATATCGAATCACAG
ACTTTCCTTTCACAAATCCTCACGTTGAGTCGTTGAGTAATAAATCTAGA
TTCTAAATATTGCATTAAAATATTTTTGTAGGACGGGATGAGAAGAACCG
TCTTCTATTCACACGTTTAAGATATTGCTAAGTTAAATCCACCACTCTGA
CTCAAGCAGGTACCTTCAAGCACCATCTTTTACTTAGTACGAAAGCTTTG
GTATAACCTGGCCAAGGCGATTGAAAGAACTTCCGCACCGTAGTCGAATG
CTATAACTTCATGCTATGGCCGTTTAGTAATCAAAACATGTTAAAAATAC
TGCTTAAGTGAAATTCCACCATTTTGACTATTTTAGGTGTATACAGTAAT
CAACAAGCAACCTGAAGTTTTCAAAGATGTCAGTATCTACATCGGTGACC
CGTGGTACGAACCAAGCAATGTCGTCGTCCGAAATTTCCACTTCGAAAAT
CTACATTCTTAG Coding sequence (CDS) from alignment at sc0000247_pilon:362395..367106- >XLOC_042614 ID=XLOC_042614|Name=XLOC_042614|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3522bp|location=Sequence derived from alignment at sc0000247_pilon:362395..367106- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGTGTCAGATTTGGAATTGACGAAAACAAAGCATAGAAGTGCAAT
ACAAAAAATTCTTACTTCGTTACAGGGAAATTTATCCAGGATGAACTTTT
GGACATTCATCTTGGTTGCCATAGGTTACTTGGTAGCCAACCCAATCATC
GCACAGCAAGATGAAAGTGTCAGATTTGGAATTGACGAAAACAAAGCATA
GAAGTGCAATACAAAAAATTCTTACTTCGTTACAGGGAAATTTATCCAGG
ATGAACTTTTGGACATTCATCTTGGTTGCCATAGGTTACTTGGTAGCCAA
CCCAATCATCGCACAGCAAGTTGACGGTGGTTACGGACCATGGTCTGAAT
GGACGCCTTGTGAGGTCACGTGTGGAGATGGACTGCAGTATAGAGAAAGA
GGTTGCAATGAACCTTCACCGTCAAATAGCGGATTGGATTGTGAACATCT
TGGACCTGCTTCAGAAACAAAACCGTGTCGTTTGAGATCGTGTCGCGTTG
ACGGTGGTTACGGACCATGGTCTGAATGGACGCCTTGTGAGGTCACGTGT
GGAGATGGACTGCAGTATAGAGAAAGAGGTTGCAATGAACCTTCACCGTC
AAATAGCGGATTGGATTGTGAACATCTTGGACCTGCTTCAGAAACAAAAC
CGTGTCGTTTGAGATCGTGTCGCGGTATCGATTTGAAAAGAGGCAATTTC
TTGAAATCAGTGGACATCCAGAAAACATATCAATTTACATTCGAAATCAA
GCCAACCGGTATCAAAGAAGGCTGGACAAACGTTTTCCATGGGTATAATT
TGGACGGTAATTGTTGTCATTTTGGGCAACGTATACCTGCTCTCTTCATG
AGATCAAATACATCACGGCTAATGACCGTTGTACCTGTCGGCAACAACAG
TAGGTACCAAGTCAATGAATGGCTCCCCATGCATGAAGCCACAAACGTTA
CAATTAGACAATCGCTTCGTGCAGATGGAACCTACAGATTTGCTTTGTAC
TACAACGAGACTCGCATTGACATGAGTGTAAATACAGAACCAAGAGTTTA
TAAAAATGTCTCATTGTACGCATCAGATAAATGGTATCAACCATCTCAAG
TTGAACTTGGATATTTCAATGTCGAAAGTCCTATTGAACCTGACTGTATC
GATTTGAAAAGAGGCAATTTCTTGAAATCAGTGGACATCCAGAAAACATA
TCAATTTACATTCGAAATCAAGCCAACCGGTATCAAAGAAGGCTGGACAA
ACGTTTTCCATGGGTATAATTTGGACGGTAATTGTTGTCATTTTGGGCAA
CGTATACCTGCTCTCTTCATGAGATCAAATACATCACGGCTAATGACCGT
TGTACCTGTCGGCAACAACAGTAGGTACCAAGTCAATGAATGGCTCCCCA
TGCATGAAGCCACAAACGTTACAATTAGACAATCGCTTCGTGCAGATGGA
ACCTACAGATTTGCTTTGTACTACAACGAGACTCGCATTGACATGAGTGT
AAATACAGAACCAAGAGTTTATAAAAATGTCTCATTGTACGCATCAGATA
AATGGTATCAACCATCTCAAGTTGAACTTGGATATTTCAATGTCGAAAGT
CCTATTGAACCTGACTATTTCAAACCACAACGTGGCTTCATCCGCCAACA
CATCCCACTGATGGATAGAACCTATGAAATTTCGTTCACAATTCAACCAA
ACAAAGCTCACTATGGAAACGAAATAAACGGCGTCTTTAGAATCTCTCAT
AATGAAACTTTAGGAAGTAACTGTTGCAAGAAAGATTTCAAACCACAACG
TGGCTTCATCCGCCAACACATCCCACTGATGGATAGAACCTATGAAATTT
CGTTCACAATTCAACCAAACAAAGCTCACTATGGAAACGAAATAAACGGC
GTCTTTAGAATCTCTCATAATGAAACTTTAGGAAGTAACTGTTGCAAGAA
AGGTTCCAACATTCCAAACTTGTTGATCACCGACAGATGCAAATTATACA
TCCTAAATGACGGTAATAAACCCGTCAGTCGAACATTGAACCCCTTCAGA
ATGACGTCAGTCAAGATTAGACAAGAGTTGACGTCATTTGGTTTGTACAG
GTTCCAACATTCCAAACTTGTTGATCACCGACAGATGCAAATTATACATC
CTAAATGACGGTAATAAACCCGTCAGTCGAACATTGAACCCCTTCAGAAT
GACGTCAGTCAAGATTAGACAAGAGTTGACGTCATTTGGTTTGTACAGTT
ACACAATCCACTTGGATGGGAAAGAAGTTCACCAAGTTTTCAACCAGAAC
CCTGCAACATACAAAGGAAACACTTTATACACCAGTGATCCATATCACAA
TGCAGCTGACGTCATCGTTCAAGACCTCAAGATCGTCTCACCTCTTCCAA
TGAACGTTACACAATCCACTTGGATGGGAAAGAAGTTCACCAAGTTTTCA
ACCAGAACCCTGCAACATACAAAGGAAACACTTTATACACCAGTGATCCA
TATCACAATGCAGCTGACGTCATCGTTCAAGACCTCAAGATCGTCTCACC
TCTTCCAATGAACGTGTACGTACCAAGGAAAAACAATTACATCACCAACA
TTCCTGTGGTTGAAAAAGCTTTCCGCTACACAATGGAAATCAAACCTGTC
GGTGTTCGCCCTGGGTGGACGAGCATCTTCCACGCCACCAGGAACGTGAA
AGGGAATCGAAACTGTTGTGGGTATGGAAGTCGTATTCCTGCTTTATTCT
TTCATTCCAACACAACCAAGTTACATACCACAGCCTCCATCAATGGTAGA
GGTAACTTTTACATTAACAACGATATGGATATGGATCGATTCACTGTAGT
GACAATTGAACAATCGAGACAACATGACGGTCAATATCGATTCTCATTGA
TGTTTGACTACATCGAGTGTACGTACCAAGGAAAAACAATTACATCACCA
ACATTCCTGTGGTTGAAAAAGCTTTCCGCTACACAATGGAAATCAAACCT
GTCGGTGTTCGCCCTGGGTGGACGAGCATCTTCCACGCCACCAGGAACGT
GAAAGGGAATCGAAACTGTTGTGGGTATGGAAGTCGTATTCCTGCTTTAT
TCTTTCATTCCAACACAACCAAGTTACATACCACAGCCTCCATCAATGGT
AGAGGTAACTTTTACATTAACAACGATATGGATATGGATCGATTCACTGT
AGTGACAATTGAACAATCGAGACAACATGACGGTCAATATCGATTCTCAT
TGATGTTTGACTACATCGAGGTGTATACAGTAATCAACAAGCAACCTGAA
GTTTTCAAAGATGTCAGTATCTACATCGGTGACCCGTGGTACGAACCAAG
CAATGTCGTCGTCCGAAATTTCCACTTCGAAAATCTACATTCTTAGGTGT
ATACAGTAATCAACAAGCAACCTGAAGTTTTCAAAGATGTCAGTATCTAC
ATCGGTGACCCGTGGTACGAACCAAGCAATGTCGTCGTCCGAAATTTCCA
CTTCGAAAATCTACATTCTTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000247_pilon | genome | sc0000247_pilon:362395..367106 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1636-1761:127 |
| Aaloc | 1285-1635:901 |
| Aaloc | 1126-1281:1748 |
| Aaloc | 979-1122:2299 |
| Aaloc | 811-975:2708 |
| Aaloc | 340-807:3646 |
| Aaloc | 163-336:4029 |
| Aaloc | 1-159:4713 |
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