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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000365_pilon:32782..35535- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042578 ID=XLOC_042578|Name=XLOC_042578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2754bp|location=Sequence derived from alignment at sc0000365_pilon:32782..35535- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGAGTTTTGGTAAGGTATGTGATAATATGATAATTGGTTAAGGTTA
CTTAACTTGTCTCGAACCTGTTTCGTTAATTTTTTCGTGGTCAGGTAATT
TCGTGTAGTTTGTACCGAAATAGAAAGTTATAGAAGACATTTTTAGCTCT
AGTTTAGACGGCCGACTTTCTGCCTACTTTAATTCACAATTAGATTAGGC
AGGGCGAAAAGTGGGCCGTCTAAACTAGAGCTTAGCCTTGAGCATCACTT
AATGCTGGGTCGTCTTTCGAAGATAGTTTCATGTAGCTTGCGCCAAAATA
GAAAATGGACTGTACTAACCTAAAGGCTTTGGGACACGAGAAGTTTTTTT
TCGTGCTGGTGCAAAGCAACATGTTCCATCCCACCAACCTAAAACGCTTT
CTCGTGTCTCCACCCCATTTTTCTTTTTGTGCTTCTCACTTTTGTCCCAG
GGATAAAATCAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTCCCATG
AAACAAAAAAAAAGAAACCATGGGGAGACACGCATTTTTTTCTTGTGTTG
ATGGGATGGAGCATGTTGCATTGCACCAACGTGAAAAAAACTCCTAGTGT
CCCCAAGTTTTTAGGTTATTGAAATGTAATTTTTCGTTCGTTTTGTCAAG
AAATATTGTCTCTCCGACCAACTGCATCAATTTTTGTAAATAGACCCCCA
GGACACAATTTGCAACAGTAATTATCTGTAATATGTAATAACATAAGTTA
TGTGTCTACTCAAAAATATTTAGAAGATCAATAATAATTGCTGTGTGTCA
TCTAAGCTGTTCTTAATCTAATTGATCGTTCATCTGTTATTTGTGTGAAG
TTTATTTGCCATCTGTATATATGCTCACCTAAACCAGCCTAAACTAAACA
CTGTCTGGAAAACAATTATCAGGTATTTTAAGCCCGAGGGGGGGGGACTT
AGGCAAATGGAGGGTACGGTATGTGCCGCCCTTAAGGGTACCTTCTTTGG
ACTTCCAAAGTCCCGCTAAGGGTCGGAAAATCAGAAAATCAAATTTCAGT
CCCACTAAGGGTCCGAGAAATAGGAAAATTTCAACTTTTTACCCTTTGAA
AGATCGAAATTTGGTCAAAATTGGGGACAAGCTTGAGTTTTTACAAGCTC
TCGTTTGATTTGATTGGTCGTTAACCTGTAATAAAACAATTTTTTTACTT
TTTCTAAAGAACACGTCATCTCTATTACTTCAAATAACCAATTAGTGAAG
TCTCTTGTAAAAACTCCAGCCCATCCCCAAAATTGGTCAAATTTGTCCCG
CTAAGGGTCGTAAAATTCCCAAAATTTTCCTTTGTTTTCTCCTTTTTAGT
CCCGGTAAGGGTCCAAAGTTCGAAAGTCAGACGGCACCCCCCCCCCCATT
AGCTCGCAACCCTAGTACCCCACCCCCCCCCCTCCCGGTATTTTAAGCCT
GTATTACATTACCAAATGCAATACTTCTAGTGTGAAGAAGTTAAAGAGTT
AAGAAGTTTAGACCTTTTAAATATAATTCATTGTGAAAAAAATGTAACCG
TTCTCATTTTATAAACTGATAACAAAAGACATTTACCGACCAACAACAAG
AACATTCATTCCGCCAAACTTTCTATTCAGATTTCTAGTTGGCATGAAAC
GTTAATATAACGTCTGTCGAACGTCCATAACTTGATGTTCGAAATCTATC
CTTTATAACATCCATATAATGTCAAACTCGAACCTAGTCCCTTAAGGGAA
GAAATTTTGGCTGGAATTTAATTTGGTGGATGAAGGACATTTTTCTCCAA
AAAAGGTCATTTAAATAAGAAAATAAAACCTGTTTTAAGGCCTGAAATAG
CACACAATACAATAATTTTAATTTGGTGGATGGCGGGAAAATTTAAATTT
GGCGGGAACTTTATTTGGTGGATTTTGACCAATTTTTTTTCCCGCCAAAA
TTTCTTCTCATGCTTAACCTTGTTTCGCACTTTTAATGGTTTTGATAGCG
TTCACGGTTGTATCAAACGCTCTTCAGTAAAATCTGCAAACGGCTCTGGG
TCCGAGATAGAAATATGAATTTGAAACAACGTTGATATTTCCCTTATTTC
TATTTTCAGGTACATATCAGAAACATTCCGACCATGGTATTCAAACAGCG
ACATTTCATCAACCTTCACAAAATCACCACCCCGTTTGTTATACTACTCT
TAATGGAACATTATAAGAACTATACTATTGGACCTATCGTATATTTTGGT
CTACACACTGGATACTGTGTATGCTGGCTACTCAAAGAAGCAATATATCC
TGACCCTGCGTTTAATGCTGAAATGAATATTCTGGAATTTGCTTCTGCGT
ATTGTGTATTGGGCGTTTACTGGATAGCGCCCTATGTTTTGATTAGCTCG
CGTATTGTGCCCCATTTGGTGACTCTTTTGACTGCAGTTCCGATATGTTT
GGTTGGATTTTTCTTTCACTTTGGAGCCGATTCTCAGAAATATTTCATCT
TGAAAACGAAGAAAGGTCTTATCACGGATGGTTTTTTCTCGCGCACGCGT
AATCCGAATTTCTTGGGTGAAGTGTTGATTTATTTTGGTTGGAGCATATT
AGCGGAAAGTATTACACCGCTCGCTGTGCTATTGTTAATGATTACAGTTT
TGTTTTATCCGAGAATGTTAAAGAAAGAAAAATCTTTGTCTAGGTATCCA
GAATTTCAAGAGTATAAGTTGAGAACTAACTTTATTGTTCCTAGATTATT
TTAA Coding sequence (CDS) from alignment at sc0000365_pilon:32782..35535- >XLOC_042578 ID=XLOC_042578|Name=XLOC_042578|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1326bp|location=Sequence derived from alignment at sc0000365_pilon:32782..35535- (Clytia hemisphaerica_ch_hm2_pilon)
AGAGAGAGTTTTGGTAAGAGAGAGAGTTTTGGTAAGGTACATATCAGAAA
CATTCCGACCATGGTATTCAAACAGCGACATTTCATCAACCTTCACAAAA
TCACCACCCCGTTTGTTATACTACTCTTAATGGAACATTATAAGAACTAT
ACTATTGGACCTATCGTATATTTTGGTCTACACACTGGATACTGTGTATG
CTGGCTACTCAAAGAAGCAATATATCCTGACCCTGCGTTTAATGCTGAAA
TGAATATTCTGGAATTTGCTTCTGCGTATTGTGTATTGGGCGTTTACTGG
ATAGCGCCCTATGTTTTGATTAGCTCGCGTATTGTGCCCCATTTGGTGAC
TCTTTTGACTGCAGTTCCGATATGTTTGGTTGGATTTTTCTTTCACTTTG
GAGCCGATTCTCAGAAATATTTCATCTTGAAAACGAAGAAAGGTCTTATC
ACGGATGGTTTTTTCTCGCGCACGCGTAATCCGAATTTCTTGGGTGAAGT
GTTGATTTATTTTGGTTGGAGCATATTAGCGGAAAGTATTACACCGCTCG
CTGTGCTATTGTTAATGATTACAGTTTTGTTTTATCCGAGAATGTTAAAG
AAAGAAAAATCTTTGTCTAGGTATCCAGAATTTCAAGAGTATAAGTTGAG
AACTAACTTTATTGTTCCTAGATTATTTTAAGTACATATCAGAAACATTC
CGACCATGGTATTCAAACAGCGACATTTCATCAACCTTCACAAAATCACC
ACCCCGTTTGTTATACTACTCTTAATGGAACATTATAAGAACTATACTAT
TGGACCTATCGTATATTTTGGTCTACACACTGGATACTGTGTATGCTGGC
TACTCAAAGAAGCAATATATCCTGACCCTGCGTTTAATGCTGAAATGAAT
ATTCTGGAATTTGCTTCTGCGTATTGTGTATTGGGCGTTTACTGGATAGC
GCCCTATGTTTTGATTAGCTCGCGTATTGTGCCCCATTTGGTGACTCTTT
TGACTGCAGTTCCGATATGTTTGGTTGGATTTTTCTTTCACTTTGGAGCC
GATTCTCAGAAATATTTCATCTTGAAAACGAAGAAAGGTCTTATCACGGA
TGGTTTTTTCTCGCGCACGCGTAATCCGAATTTCTTGGGTGAAGTGTTGA
TTTATTTTGGTTGGAGCATATTAGCGGAAAGTATTACACCGCTCGCTGTG
CTATTGTTAATGATTACAGTTTTGTTTTATCCGAGAATGTTAAAGAAAGA
AAAATCTTTGTCTAGGTATCCAGAATTTCAAGAGTATAAGTTGAGAACTA
ACTTTATTGTTCCTAGATTATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000365_pilon | genome | sc0000365_pilon:32782..35535 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 19-663:646 |
| Aaloc | 1-18:2755 |
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