XLOC_042577 (mRNA) -

Overview
NameXLOC_042577
Unique NameXLOC_042577
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:2189426..2190067+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042577 ID=XLOC_042577|Name=XLOC_042577|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=642bp|location=Sequence derived from alignment at sc0000001_pilon:2189426..2190067+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTCCAGGAGAAAAGCGCAGATACCTTCAAAACCACCGAGCCCAA AAATATTGGTCGCAAGAAAAGTCGGAAACTATCAGTAGCTGAAAACTCCT GTCAAATCCAAGCTGTTAACGCCAAACAAAATCCACCCACTAAATTCAAC CAGACACAGACCAATTTTtcggaagaaaattttcatttcctgTACTTCAT TTGGGCATATGGTAGGAAATATATGTCAACAGCAGATCAACAGCTAATTC CATGCTTCAAAGGTTGGTTGGTCAAATACCGAACAGAAAAAGGAGCGACT GTTGAGAAAACGTATGAAACCTTCTTACCGCCCATCAATGCAAAGGTTAC AGAATTCGCAACGATTCAAAACTATCTGACGTACTTGCAAGATCTATCCA AGTCTGTCAACATGGCCTACGTGAACGTGACATTAGATGTTGGAGCTGCA ATTAACGCTTACAAAACGATTTGGTGTCATCCTGAACGATTTGGGAATGT TATCATCCATTTGGGAAGTTTTCATTTTATCAAGGAAAACTTTAAGGTAT GTTTAATATCATGGTTTATGTCATCAGAAAGTATAATGACAATGTTGACG CCATTATCCAAGACAtccattttttacaaaaaagctgCTTAA

Coding sequence (CDS) from alignment at sc0000001_pilon:2189426..2190067+

>XLOC_042577 ID=XLOC_042577|Name=XLOC_042577|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1284bp|location=Sequence derived from alignment at sc0000001_pilon:2189426..2190067+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTCCAGGAGAAAAGCGCAGATACCTTCAAAACCACCGAGCCCAA
AAATATTGGTCGCAAGAAAAGTCGGAAACTATCAGTAGCTGAAAACTCCT
GTCAAATCCAAGCTGTTAACGCCAAACAAAATCCACCCACTAAATTCAAC
CAGACACAGACCAATTTTtcggaagaaaattttcatttcctgTACTTCAT
TTGGGCATATGGTAGGAAATATATGTCAACAGCAGATCAACAGCTAATTC
CATGCTTCAAAGGTTGGTTGGTCAAATACCGAACAGAAAAAGGAGCGACT
GTTGAGAAAACGTATGAAACCTTCTTACCGCCCATCAATGCAAAGGTTAC
AGAATTCGCAACGATTCAAAACTATCTGACGTACTTGCAAGATCTATCCA
AGTCTGTCAACATGGCCTACGTGAACGTGACATTAGATGTTGGAGCTGCA
ATTAACGCTTACAAAACGATTTGGTGTCATCCTGAACGATTTGGGAATGT
TATCATCCATTTGGGAAGTTTTCATTTTATCAAGGAAAACTTTAAGGTAT
GTTTAATATCATGGTTTATGTCATCAGAAAGTATAATGACAATGTTGACG
CCATTATCCAAGACAtccattttttacaaaaaagctgCTTAAATGGCATT
CCAGGAGAAAAGCGCAGATACCTTCAAAACCACCGAGCCCAAAAATATTG
GTCGCAAGAAAAGTCGGAAACTATCAGTAGCTGAAAACTCCTGTCAAATC
CAAGCTGTTAACGCCAAACAAAATCCACCCACTAAATTCAACCAGACACA
GACCAATTTTtcggaagaaaattttcatttcctgTACTTCATTTGGGCAT
ATGGTAGGAAATATATGTCAACAGCAGATCAACAGCTAATTCCATGCTTC
AAAGGTTGGTTGGTCAAATACCGAACAGAAAAAGGAGCGACTGTTGAGAA
AACGTATGAAACCTTCTTACCGCCCATCAATGCAAAGGTTACAGAATTCG
CAACGATTCAAAACTATCTGACGTACTTGCAAGATCTATCCAAGTCTGTC
AACATGGCCTACGTGAACGTGACATTAGATGTTGGAGCTGCAATTAACGC
TTACAAAACGATTTGGTGTCATCCTGAACGATTTGGGAATGTTATCATCC
ATTTGGGAAGTTTTCATTTTATCAAGGAAAACTTTAAGGTATGTTTAATA
TCATGGTTTATGTCATCAGAAAGTATAATGACAATGTTGACGCCATTATC
CAAGACAtccattttttacaaaaaagctgCTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042577XLOC_042577-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:2189426..2190067 +
Properties
Property NameValue
Aaloc1-642:1