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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1046440..1048551- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042547 ID=XLOC_042547|Name=XLOC_042547|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2112bp|location=Sequence derived from alignment at sc0000007_pilon:1046440..1048551- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGAACCTCAATTAACGATGATGATGAAAATTTGTTCAAATGGCT
GGAAGGAGGAAAGCTGCTTATCTCGATTATATTCCTTGGTGTTGTAAGTT
TTTACCTTCGTTGCTCTTTGTTTTCATTGAACCTCTATTTTATAAGGCGT
ATGTTTTTTTTCTTTTGCAATAAAAAAATTACAGCAAAAAAAAAAGCCTT
TGCTATAAAACAAGCAGAGAAAAAGAGCCCTCTTCTTGAAAAGTAACCCT
GTTACTTTCTGCTACTTTTAGAAAATATTTTATAGACTGGTTCCTGGTTT
AACTTTAAAATCAGGAAACTGGTTATTTGTCAAAGCGCTTTTCCCAGAAT
AACAATGTTATGACAGGTCCTCTCCTCTTGGTCTCTGTATATTATCCAAT
GTCTAATTTTATTTTAGGGTATTTTTATGGTCGTTTTGTGGGCTAAACGT
CAAATATTGCGGTTGTACTTGATTAATAAGAAAGGTCCTATTGACCAAGC
TGGACATGCAGCTCCAAAGGTTAGTGATTTGTGACACTCCATTCAAAATA
TATCTTCCACATATTTTCTGTATCTAGTTTCTTTTAATCAATATTGATAC
ACCTCCAAAATTTATTTTTATCTTTCAGGGATTAAGAAGAGAGATTGAAA
ACAGCTTCAACAAGATATCAGGTTTGCGGCTTGAACCAAAACTTCTTTCG
GATCCAGGTCAACATGAACCATTATTGAATTCTTTTGTTGATGAGCGAGG
TATGTAGTTATTTCCTCTACACTTGTATCTTTTTGTTTTGTATTTTTCTT
ATTCTAGGTAGAAAAACTGAAATAAGAAGAAAATTTAAACTAGGGGCGGG
CTGGGGGGAGGGCTTAAGTCTTTATCTAGAAAAGTGGTTGTTGCTCGTTG
AAATCAGGGGACTATTTTTCTTCCTTGATATACGTTATTCTACTCTGTGT
TTTTATTTTTTCAGATGATAGCAGCTACAAATTCAGAAGAAAGGCTTTCG
ATCTAATGAGCTGTTTGGGTGAGAATGAGTATAATTATTGTTTTTTTTTG
CTGTATTTTCTGCTTTTGTCATCTGCTGGTTGCTAACTAAACAGGGATTC
TTTTGTTATAGCCTCATACATAATACTGTTTTTTTAATGGTGGTTGAGAT
CTATTTTTCACCTTGATTCAGATGAACTGCTGAGTCGAGTAGATTTTGGT
CTGGCCCGCAAGCCATCACAGAGTGTTCGAGAACACTTGGTATCACTTCA
ATCTCCACCTTACGCTCCTTTTGAAGGAAAAGAATATGAAGATCTTTGTG
AACAAGTCACTAGGTTATACGAACATGCCAGATACGGTGCAAAGGTATTA
GTCACTCAGGGTTCATATATTGATTAGAAAAGATATACAGCTTTTGAATT
TAAAGAATGTTTCAAATATTGAACGAATGGATGGTCAGAATCTTCACAAA
GTGAATTATTTTTAATCCTACCTGGTATTTCGGATAAAAAACAAGAGAGC
TACTTGGGACGAGGTGTAGTTTTTATAAGCTCTTATTTGATTTATTTGGT
CCGTAACCAGTAATAAAAAAATTCGTTACTTTTCTAAAGAACGTGTAATT
TTTATTACTTCAAATGATCAGTTATTAAAGTATCTTATAAAAACTCCAAC
TCATCTGAGCTACTTAGCAAGTCCTAAGAATTGTATTACATATAACATGA
TTATCTGCATTTTGTTTAACTGTATTTCATATTCAGGAATTTGGTGAGCA
AGACTACCATGTGTATTCAGAAAAAATAGATCAGTTATACGACAGGTAAA
CTTGAAATGCTTTTGAATTGTTCTTTTTACCATGATGTTTCTTAGTATTT
GAGGAAATCAGTTTGAATTTGTTCTTTAATAAAGGTACTTAGACTTTTGC
ATCCGGTTGATTTCTTTAGAGTTCATCAAAAGCTTTTAGTACCTGGCAGC
TTGGTTGTTCATGCAGACCATCAACATCAAGTCAAAACACAAAGTCAATG
TACTTCAAATGTGGAAACAGAGTTGACGAGCCAAGTCATATTACCCTCAA
CACTGGTCGAAAGCAAAACGTCTGGTTTGAGAAATCGAGATGGAAGCAAA
AATATTGTATGA Coding sequence (CDS) from alignment at sc0000007_pilon:1046440..1048551- >XLOC_042547 ID=XLOC_042547|Name=XLOC_042547|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1590bp|location=Sequence derived from alignment at sc0000007_pilon:1046440..1048551- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCAAGAACCTCAATTAACGATGATGATGAAAATTTGTTCAAATGGCT
GGAAGGAGGAAAGCTGCTTATCTCGATTATATTCCTTGGTGTTATGTCAA
GAACCTCAATTAACGATGATGATGAAAATTTGTTCAAATGGCTGGAAGGA
GGAAAGCTGCTTATCTCGATTATATTCCTTGGTGTTGGTATTTTTATGGT
CGTTTTGTGGGCTAAACGTCAAATATTGCGGTTGTACTTGATTAATAAGA
AAGGTCCTATTGACCAAGCTGGACATGCAGCTCCAAAGGGTATTTTTATG
GTCGTTTTGTGGGCTAAACGTCAAATATTGCGGTTGTACTTGATTAATAA
GAAAGGTCCTATTGACCAAGCTGGACATGCAGCTCCAAAGGGATTAAGAA
GAGAGATTGAAAACAGCTTCAACAAGATATCAGGTTTGCGGCTTGAACCA
AAACTTCTTTCGGATCCAGGTCAACATGAACCATTATTGAATTCTTTTGT
TGATGAGCGAGGGATTAAGAAGAGAGATTGAAAACAGCTTCAACAAGATA
TCAGGTTTGCGGCTTGAACCAAAACTTCTTTCGGATCCAGGTCAACATGA
ACCATTATTGAATTCTTTTGTTGATGAGCGAGATGATAGCAGCTACAAAT
TCAGAAGAAAGGCTTTCGATCTAATGAGCTGTTTGGATGATAGCAGCTAC
AAATTCAGAAGAAAGGCTTTCGATCTAATGAGCTGTTTGGATGAACTGCT
GAGTCGAGTAGATTTTGGTCTGGCCCGCAAGCCATCACAGAGTGTTCGAG
AACACTTGGTATCACTTCAATCTCCACCTTACGCTCCTTTTGAAGGAAAA
GAATATGAAGATCTTTGTGAACAAGTCACTAGGTTATACGAACATGCCAG
ATACGGTGCAAAGATGAACTGCTGAGTCGAGTAGATTTTGGTCTGGCCCG
CAAGCCATCACAGAGTGTTCGAGAACACTTGGTATCACTTCAATCTCCAC
CTTACGCTCCTTTTGAAGGAAAAGAATATGAAGATCTTTGTGAACAAGTC
ACTAGGTTATACGAACATGCCAGATACGGTGCAAAGGAATTTGGTGAGCA
AGACTACCATGTGTATTCAGAAAAAATAGATCAGTTATACGACAGGAATT
TGGTGAGCAAGACTACCATGTGTATTCAGAAAAAATAGATCAGTTATACG
ACAGAGTTCATCAAAAGCTTTTAGTACCTGGCAGCTTGGTTGTTCATGCA
GACCATCAACATCAAGTCAAAACACAAAGTCAATGTACTTCAAATGTGGA
AACAGAGTTGACGAGCCAAGTCATATTACCCTCAACACTGGTCGAAAGCA
AAACGTCTGGTTTGAGAAATCGAGATGGAAGCAAAAATATTGTATGAAGT
TCATCAAAAGCTTTTAGTACCTGGCAGCTTGGTTGTTCATGCAGACCATC
AACATCAAGTCAAAACACAAAGTCAATGTACTTCAAATGTGGAAACAGAG
TTGACGAGCCAAGTCATATTACCCTCAACACTGGTCGAAAGCAAAACGTC
TGGTTTGAGAAATCGAGATGGAAGCAAAAATATTGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1046440..1048551 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 604-795:193 |
| Aaloc | 544-600:377 |
| Aaloc | 373-543:940 |
| Aaloc | 319-369:1147 |
| Aaloc | 196-315:1485 |
| Aaloc | 94-195:1696 |
| Aaloc | 1-93:2113 |
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