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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:999693..1006030- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042544 ID=XLOC_042544|Name=XLOC_042544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6338bp|location=Sequence derived from alignment at sc0000007_pilon:999693..1006030- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGAAGATGTTCCTCCTGCCAACATGCCGAGCAACCATGTCATGTC
ATCACCAACATTGAATCATCACCATGGAAACTCAACAACAGCTATACCCG
CCATCTTGCGTTTCGTCATCTCACCTCAACAAGCAACTGACCTCACTGTC
ACTAACGACCACACTTTCCATGAAATTCTTGTAGGGCTATTATTTTGAAG
ACACCCTCTGAGTTTCAGCTATTTACAATCATGGTTGAAATATATTGAGA
ATTTCGGAGAATTTCCCAGCGAGAAAGTCGATTTTGGGCTATCTTTTAAT
TTAATCGAATATTTAAATTTGGGAGGGGTTGGCAGACTTCAAGGCTATAT
ATTCTGGGCCTTATTGGACTATTTTTGAACTTTTGGATCCTCTGATCCTA
AGCTCCTAAGTTAAAACTCTACCCTTCCAACCTACTTTAGAGCACTTACA
AATCGATTGTGATTTCAAAACTTCCCGGTGAATTTCCCTTTTTTCTCAAA
TATTATGACCTTGATTGTAGATATTATGTTAATGCAATACATATTAGGGG
GGAGGGCCGGCCAGTACTACAATCTTAGACAGCATGATGTTTAGTAATGT
GATGTTATACCAAATAACTCATAAATATTTCTTGTACCATAAGTTCTAAA
ATTTACCATTTTTCCTTCTTGTACCATTTTCTCTGCACACAAACGAAACG
AAAGTTTGTTAAATCCAAAAATTGAAAATGGATCACAATAAGGGGCCGTC
CGCATAGTACGTACGCACTAAGGGGAGGGGTCTTCTTAAAAGCGTATGCT
TGCGTACAGAGGGAGGGGAGGGGTCAAAGGAAAATGTACATACGCAGAGA
AAAAAATTTTCATAGCCCCTTTTTCGCTTGTTTTTTGTCGACTTTTACGC
TTGTTCTACGCATCAAGGAAAAGAAAAAGTTTCTTGATAAACATTGAGTT
CCATGAATTAAATAAAGGTCCCAACCAAAAATTTGAATTCGAAATTTTCT
TCAACCGAGGGGGGAGGGGTGAATGAAAAAGTACGTACTTACCAGAGGGG
GTATAGCCATTTGTGTACGCAACGTGTTAAATATTTTTTTTTCACTTCAG
GATGTCTTGGATGAGTATATGCAATCACATGGTGCTGGCAAACCAACTGC
TTTCGAATGTAATTTTTTTGTTATTTCTGTAGTGATACACTGGGCTCAAA
AGTCAGATTTTCTGACTATTTACGAGAACTTGTTATGCGTGTCCAGTGTC
AAGTGGAATTTTTAAAACCAAAAATCAATACGAAAACAATGCGTGGTCGA
AGATAAGTTTCGATGACACCCATGGTTACCCCACGTGCTTCCAAGAATGA
TTTCCTTATCACTCAAGCTGTAACCCACTTTTTTAATAAACTAATAGCAT
AAGGACAGCCACCTACATGCCCTTTATTAATCATGTAATTTATGTTAGGT
ATGTATCGATCACTAATTTATCATTGAAAAGAGCCTTCCAAATCCAAAAA
CCTTTTAACTTTCGACGTGTTTATAAGAATTTCCAAAAGACAGCATGCAT
AAAATAGTTGATTTCTAGAGATTTCTAAACCAATCAAACGAGCATTGAAA
TCTACACTACCTTGGACCTGGCCATCAAAACATTTTGCCGAATCCATCGT
CAATTATATTTTAAAAATATTGGATTCGGAAAATTGTTTTTTGTTGCAAG
GTTTTAGGGCTAAATCGCTTCGGTGCCAATCGTGTGAAATAATTTTTTGT
TGTGAATACCGTATTGTTTTATTTTATACATTTGGTTTTGAATAAATTCT
TATTATTTTTTATTTTGATTTCAGATGACGATGAAGATGGAGACAGAGTT
ACGGTCCGTTCCAATGAAGAATTGCGCGCCATGTTGGAATGGGTAAAATG
CCTCTGCCACTTCCCTTCTCTCGCAATGCCTTTAATTGTTTCTAAAGATT
ATCGAGGAATTTTGAACGGGATCCGCCAAGCAATGTTTGTCTTTTCATCT
TTCAGCATCGTTGGAATAACCAGAATACAGCCAATGGATTACGCATCGTT
CCACTCAATATCTACCCCAGGGGTGAGTCGCCAATATCCACGTATTATAT
CATAAAGACAACATCACTATCTCCCATATGATGTTCTCTCACTCTTATTT
TCTTATTCACGTCTTTTTTTCAGTTGCTCGTACTTTTGCTGAACGAAACT
CTACGCTGATGGTAAGATATATTGCTTTTGAACAATGATGATGTATAGAA
TGAAGCGCGTACAATTGTACAGTGGCCGAACTTTCAGCGCACGTAAATTT
AAAAAAGTACGGAAATGATTGTTGAAGATGCTACCCTTTTAAAAGTGCCT
GAACTTATGTTTTTATAAAAAATTTGTTCAATTACCAGGGTACAACTAAT
TTCAATATTTATCAAGATACGGACAGTCTTTCCTTTCAAACACATAATAA
AGTGCTGCACCATTCGTATCTTTCAGGTGGACATTGAGTCACCACCAGTA
TCTCACCCCTCTTCAAGACAATCGAGCGGAAGTGGTAGCGGGGGTGGTTC
AACCGGGTATAATTACTTCCCTTCATCTTCTCTCTCAGCAATCAAAACTA
ACCTTTCTAGAACGCTTTGCACCACTACCTAATGTTAATGAAGTGATTTC
AGTTTGGCCGAAAATTGATTTGTTATTTGTCTTTTTCTTATTTTTGAAGT
TTATTTGGTGGCAATGGTTCATTAAATTTAATCGTAGAGATTAAATCGAA
TTCAAAGCTTTTCAAATATTTTTGAAATTTTAATCTTTCCAGGCGCAAGA
AACCGAACAGTATTCAAGGGATCCTGAGCAGTGGCCAGGTTAGACGTCCT
ATTGGAGTATTTCAAAGTATTCAATTTCTTTAAAGAATTTTACATGGTCA
ACGGTACGTTTATCAACCACTCATCCACAATATTCTTTCTATAGATTTAT
CAGCACGACATCCGAATGTTGAACATTCTTGGACATGGCAATGGTGGAAC
AGTTCATAAGTATGCATTTTTCTCCGTCTCAAGATGAATCAGGTCAGGAG
GTAGCAGTCGCTTTCAGAATAGATGGAGTTTTTATAAGATACTTGGTCAT
TTACTTAATTGTGGTCATTTGAAGTAATAAAAATGACGCGTTCTTTAGAA
AAAGTAACAGAATTGTTTTACTACAAGTTAACGACCAACAACATTAAGAG
CTTGTAAAAACTCCATCTCTTCCCGTCGCTTTGGATCTGTCTTCTTCACA
AACTAGGTCACTGGTGGTTTAACCAACCTATTATATGATTTATCACAAAC
AGAAGAAATAGTCGCGTTCACTAACTATTGTGACTTTTTTTCTTACAGAG
GTTTTCACGTACCCAAGCAGCGTTATATGGCCGTGAAGGTATGTCCCCTC
TCCCATTTCATCATCATCACTTGTGTGGTCACAGAATCTGGTATAGTTGA
AAAGATATTTTGAATTCTATGGAACATTCTGAAGATTTTGAGAAATTTGA
AATGCTCTGCTTAAAAGTAATCAGAACATTTGTTTGTTTGAGTGTTTTTT
TGTTTTAGGTGATTCCACTGGACATTTCTGAGGAAATCCAGCGTCAAATC
CTTTCCGAATTGAGCATTCTGTTTCAATGTAATTCACAACACATCATTGG
TTTTCATGGTGCTTTCTTCATGGAGAACAAAATTTCCATGTGTATGGAGT
ACATGGACGGTGGTTCGTTGGATTTCTACGGAAAAATTCCACAAAATGTT
CTTGGCAGAATCGCTGTCGCTGTAAGTATTTCTCAAACTTGTGTTACAAT
GAATCCAATTGATGTATATATCATCTTTGAAATGATCATTCACCTGTGAG
TATGACATAAGTCAAGTACCTGCATGTTTCCTACGTCATTGATGTTCTTT
ACTTGACACCTTTTACAGGTTGTGAAGGGTCTTCACTATTTGTGGGATAT
CAAGATCATTCATCGAGGTTTGCCACTTAAGCTATTCTTATTCCGTTTAT
ATATATATATTTTGTTTGTGATTCATTGCATTTGTTGTTTCTATGCGCTG
GGGAGAAATGAGAAAGAAATATTTATGTAGTGTATATTTAATATTTAATA
ATGTATCATTTGGCTAAACAATGACTTTATCATTGAATTTCTTTAGATGT
GAAGCCGAGTAACATGCTGGTCAGTTCGAACGGGATGGTCAAGATTTGTG
ATTTTGGTGTCAGTATACAGGTTGAAAATGCTTTTACTTACTATTTGTCT
GTGATTCATTGCATTTATTGTTTTGAAGATATATTACTTACCGATCATAA
TCATGAAATTTTATTTTATCATTTTCTACTAGTTGGTGAATTCGATAGCC
AAAACATACGTTGGTACAAATGCTTACATGGCTGTAAGATTATTTGCTTA
TTTTACTTTTGAAACTTAGAAGTAGTACTTTTAATTACAATTCATCGATT
TAAATATGATCATTGAAAAAGTTAAACCCTCTGAAATTGTTATGGCTTGA
ATAAAAACTTCCAGATTCTTGCACATTGGTTGGATTGTGTTTTATAAAAT
GGGTATTTTCGTGTTTTTCAAATTTCAGCCTGAACGTATTCGTGGTGAAG
AGTATGGTATACATTCTGATGTCTGGAGTTTGGGACTTTCCCTCGTCGAA
ATGTCTACTGGCACTTTCCCATATGCACCTGTAAGTGTTTCCCCAGGCCC
ACAAAAACATCCTCCAACTTTTTTCTATGCTTTTTTAAATGCAGGGTGTC
CCGGAAAAAAGTCCTGTTTCAAAACACGACTACAATAGACCAAATTTGTG
TGTATGTCATATATGTGTGTTTTTAATTATGTTTATTGTGTTTCTGTTTT
ACTATATCCACTTAAGTGTTAATTACTATTTTGAGTTAGAGAGAAACTAG
GCATAGACTCACAAAGATCTTTCTAGTAGTCGTGTTCTGACACAGGACTT
TTTCCCGGGACACCCTGTAAGTGCTGACCCTTTAGACTGACATGGTTTTA
AACGATGTTAAACCTCGTCGAAAGTTACCTCAATAACCTTGTTAACCTCT
CTTGAATTCCGGGCTTGATTTTTTTTACTTTTTTGATTTCAGAGTTCCAA
ATCAAACACACTGGAAATCCTTCCTGTGAGTAGCTTTTTTTTTCCGTGTA
CTATCTGTCTGTATGGGTTTCACTTTCATTGTTATCTACAAAAGGAGCAC
GTTTCTGATATGTAATTAACTTTTTACCTTTCCCATTTCTGTTTCAGCCA
ATCGAATTACTACAGCTGATAGTGAATGAGGTATAAAGACCTTCGAATCT
TAAATTAAACTTTTAGTTAATTTTTTTTCTGGCAGACGCCTTATAAAAAT
TAATTCTTCAACATCATCATTCATCTCCAACATCTCCAACCATTTTTTAG
AATCCACCGCAATTATCAACTGATCTCTTTGGTGATGCTTTGAGGCACTT
TGTGGATATCTGGTGAGTACAAATTCTTCGTCCGGATATCTGGTGAGTAC
AAATTCTTCGTCCGGATATCTCTATAAATGATTTGTTTATTCAATCTTTT
GATTACATCGAATACTCCTTCTCAATTGTTTTAGTTTACAAAAGAATCCC
AAGTTGCGACCTCCACCTGATCAATTGGCTGTAAGTTTGTTTTTACATTA
GCTTCGACTTGATTTTGTTTGTTTATTAATTGAAATCCTGCACTTCTTCA
TTTCTTGAAATGGACATACTCATATTTCTTGCTGGTAGGAAGACTTTTTC
CCAGATCTCTCCAGTAGCATATCCTCTGAATCCCCCTGACGAACACCCAA
AATGCAAATTCTTAAATGTCCTTGCACCTATAGAATAAACAGTACTTTCA
ACATCACCAATAACCACTTCTTCTAAATGGAGATCTTCATCTTTCCAAAC
ACCTCCGAATCTATGTACTGAACCCAAAAGTAACCATCTCTCTCTTTAAT
TAACCAAACTATGGTTATAACAACGTCTTTACATCTCTCTCTTTAATCAA
CCAAACTATGGTTATAACAACGTCTTTACTTATTAACCAAACTATGGTTA
TAACAACGTCTTTACTTATTAACCAAACTATGGTTATAACAACGTCTTTA
CTTCTTTATCCTAACCATGCTATTTGAGGAACTAATGCAAGCCTGTCTCT
GGACATTTCCCTTTGTTACTAAGAGCTTCTACAGTTTTGTTCAAAACTAC
AACACGTCCAATTATTGCTCACGTTTTTATTACATTATGAAGCGCCATCC
GTTCATCTCACAAAATGATACGGAAAACCAAAACATCATTGTCAAAGAAT
TCATCTGCGAATTTCATCGTTTGACCAATGCCTCGTAA Coding sequence (CDS) from alignment at sc0000007_pilon:999693..1006030- >XLOC_042544 ID=XLOC_042544|Name=XLOC_042544|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2802bp|location=Sequence derived from alignment at sc0000007_pilon:999693..1006030- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGAAGATGTTCCTCCTGCCAACATGCCGAGCAACCATGTCATGTC
ATCACCAACATTGAATCATCACCATGGAAACTCAACAACAGCTATACCCG
CCATCTTGCGTTTCGTCATCTCACCTCAACAAGCAACTGACCTCACTGTC
ACTAACGACCACACTTTCCATGAAATTCTTATGGAGGAAGATGTTCCTCC
TGCCAACATGCCGAGCAACCATGTCATGTCATCACCAACATTGAATCATC
ACCATGGAAACTCAACAACAGCTATACCCGCCATCTTGCGTTTCGTCATC
TCACCTCAACAAGCAACTGACCTCACTGTCACTAACGACCACACTTTCCA
TGAAATTCTTGATGTCTTGGATGAGTATATGCAATCACATGGTGCTGGCA
AACCAACTGCTTTCGAATGATGTCTTGGATGAGTATATGCAATCACATGG
TGCTGGCAAACCAACTGCTTTCGAATATGACGATGAAGATGGAGACAGAG
TTACGGTCCGTTCCAATGAAGAATTGCGCGCCATGTTGGAATGGATGACG
ATGAAGATGGAGACAGAGTTACGGTCCGTTCCAATGAAGAATTGCGCGCC
ATGTTGGAATGGCATCGTTGGAATAACCAGAATACAGCCAATGGATTACG
CATCGTTCCACTCAATATCTACCCCAGGGCATCGTTGGAATAACCAGAAT
ACAGCCAATGGATTACGCATCGTTCCACTCAATATCTACCCCAGGGTTGC
TCGTACTTTTGCTGAACGAAACTCTACGCTGATGTTGCTCGTACTTTTGC
TGAACGAAACTCTACGCTGATGGTGGACATTGAGTCACCACCAGTATCTC
ACCCCTCTTCAAGACAATCGAGCGGAAGTGGTAGCGGGGGTGGTTCAACC
GGGTGGACATTGAGTCACCACCAGTATCTCACCCCTCTTCAAGACAATCG
AGCGGAAGTGGTAGCGGGGGTGGTTCAACCGGGCGCAAGAAACCGAACAG
TATTCAAGGGATCCTGAGCAGTGGCCAGGCGCAAGAAACCGAACAGTATT
CAAGGGATCCTGAGCAGTGGCCAGATTTATCAGCACGACATCCGAATGTT
GAACATTCTTGGACATGGCAATGGTGGAACAGTTCATAAATTTATCAGCA
CGACATCCGAATGTTGAACATTCTTGGACATGGCAATGGTGGAACAGTTC
ATAAAGGTTTTCACGTACCCAAGCAGCGTTATATGGCCGTGAAGAGGTTT
TCACGTACCCAAGCAGCGTTATATGGCCGTGAAGGTGATTCCACTGGACA
TTTCTGAGGAAATCCAGCGTCAAATCCTTTCCGAATTGAGCATTCTGTTT
CAATGTAATTCACAACACATCATTGGTTTTCATGGTGCTTTCTTCATGGA
GAACAAAATTTCCATGTGTATGGAGTACATGGACGGTGGTTCGTTGGATT
TCTACGGAAAAATTCCACAAAATGTTCTTGGCAGAATCGCTGTCGCTGTG
ATTCCACTGGACATTTCTGAGGAAATCCAGCGTCAAATCCTTTCCGAATT
GAGCATTCTGTTTCAATGTAATTCACAACACATCATTGGTTTTCATGGTG
CTTTCTTCATGGAGAACAAAATTTCCATGTGTATGGAGTACATGGACGGT
GGTTCGTTGGATTTCTACGGAAAAATTCCACAAAATGTTCTTGGCAGAAT
CGCTGTCGCTGTTGTGAAGGGTCTTCACTATTTGTGGGATATCAAGATCA
TTCATCGAGGTTGTGAAGGGTCTTCACTATTTGTGGGATATCAAGATCAT
TCATCGAGATGTGAAGCCGAGTAACATGCTGGTCAGTTCGAACGGGATGG
TCAAGATTTGTGATTTTGGTGTCAGTATACAGATGTGAAGCCGAGTAACA
TGCTGGTCAGTTCGAACGGGATGGTCAAGATTTGTGATTTTGGTGTCAGT
ATACAGTTGGTGAATTCGATAGCCAAAACATACGTTGGTACAAATGCTTA
CATGGCTTTGGTGAATTCGATAGCCAAAACATACGTTGGTACAAATGCTT
ACATGGCTCCTGAACGTATTCGTGGTGAAGAGTATGGTATACATTCTGAT
GTCTGGAGTTTGGGACTTTCCCTCGTCGAAATGTCTACTGGCACTTTCCC
ATATGCACCTCCTGAACGTATTCGTGGTGAAGAGTATGGTATACATTCTG
ATGTCTGGAGTTTGGGACTTTCCCTCGTCGAAATGTCTACTGGCACTTTC
CCATATGCACCTAGTTCCAAATCAAACACACTGGAAATCCTTCCTAGTTC
CAAATCAAACACACTGGAAATCCTTCCTCCAATCGAATTACTACAGCTGA
TAGTGAATGAGCCAATCGAATTACTACAGCTGATAGTGAATGAGAATCCA
CCGCAATTATCAACTGATCTCTTTGGTGATGCTTTGAGGCACTTTGTGGA
TATCTGAATCCACCGCAATTATCAACTGATCTCTTTGGTGATGCTTTGAG
GCACTTTGTGGATATCTGTTTACAAAAGAATCCCAAGTTGCGACCTCCAC
CTGATCAATTGGCTTTTACAAAAGAATCCCAAGTTGCGACCTCCACCTGA
TCAATTGGCTCGCCATCCGTTCATCTCACAAAATGATACGGAAAACCAAA
ACATCATTGTCAAAGAATTCATCTGCGAATTTCATCGTTTGACCAATGCC
TCGTAACGCCATCCGTTCATCTCACAAAATGATACGGAAAACCAAAACAT
CATTGTCAAAGAATTCATCTGCGAATTTCATCGTTTGACCAATGCCTCGT
AA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:999693..1006030 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1306-1401:97 |
| Aaloc | 1261-1305:754 |
| Aaloc | 1198-1257:939 |
| Aaloc | 1165-1197:1092 |
| Aaloc | 1132-1164:1247 |
| Aaloc | 1030-1131:1761 |
| Aaloc | 979-1029:2007 |
| Aaloc | 907-978:2191 |
| Aaloc | 856-903:2421 |
| Aaloc | 643-855:2781 |
| Aaloc | 604-642:2990 |
| Aaloc | 538-600:3395 |
| Aaloc | 493-537:3546 |
| Aaloc | 412-489:3863 |
| Aaloc | 376-411:4164 |
| Aaloc | 307-372:4334 |
| Aaloc | 241-306:4513 |
| Aaloc | 181-237:5239 |
| Aaloc | 1-180:6339 |
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