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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:966499..968968- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042543 ID=XLOC_042543|Name=XLOC_042543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2470bp|location=Sequence derived from alignment at sc0000007_pilon:966499..968968- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAATCATATTATCCTATTATCGTTTTTGATACTATGCTGTTACGC
TTGTTATGGCAACACACAATACATTGCCAAACATGATATGACATCATCGA
GTTACCAGCAAGAGTTCAGCAAATTGCACCATAAAGGATATCGGTTGAAG
CAAGTCAGTGGTTACTCTACATCACAAGGGTACCCAAGGTATGCCGCCAT
CTGGGTGAAAAATAGCCGCCCCAACATCGCATACAAGGCGAAACATGGAA
TGAGCAGCAAGGATTACCAGGAAGAGTTTCAAAAGAACCGTCTTCTCTAT
CGTCTGGTCATGATCGAAGGCTATCTTGTGAAAAAAGACAACAAATGGGA
AGCTCACTATGCAGCTATTTGGCACAAGAAAACATCGCTAGGAGCAAACC
AACCAGCTTACAAAACACACCATAAAATGTCATCAAGGACTTACCAGACC
CTATTCAACAAATACAAAATGCAAGGCTATCGATTGACTTGGGTTAGTGC
GTATACTATTGGCAAGAAAAGCGACTACTATGCAGCAATATGGGAAAAGA
GATCAGGCCCTACCATGATCACTCGCCATCGAATGACCAGTTCTCAATAC
CAATCTTACTTCAACATATACACTCGTAGAGGATATCATTTGACACTGGT
GGATGGGTATCAGTTGGATGGAAGTGCGAGATATGTTGCCATATGGGAAC
GGATAGGTGGCGCAAGATCTGCTCGCCATGGTTTGATAGAGCCCAACTAT
CAAGCAGCTTTCGATAACCAGAAGTACCGTGGTTATAACCTCAATATTGT
CTCTGGATATTTAGTAGGATCGACCAAACGATACGCTGGTATTTGGATCA
ACAGTGGAATCTGGACCACTCAAAACCTTAATCATATTGATAGCACAGTG
AAAGATTTCCTCAAAGAAAACCAAATTCCTGGAGGTTCTTTAGCCATTAC
ACGGCATGGAAAACTGGTCTTTGCTCAAGGCTACGGAAATGTGAATACTG
GTTTAGATGCTTCACCAAGTCACCTTTGGAGGATTGCCAGTATTTCAAAA
CCAATCACTGGCGTGGCCATCATGAAGCTGATTGAAGACGGTAAGTACCT
AGATTTCTTCAGAATGACAAATTGTTCGTCATTTGTTTACACCCTTTAAA
GTAAGGTTCGAACTAGAGGTTATGCTGTAAAATGAGAACGATATGAATAG
AAACGATATGAAAAGGAATTTGATGAAGACATAAGTATCTTGTTTGCACC
ATGCTTACGGTATAAAACAAAGTTCATAACGTCATTTTTGCAATTAAATT
CTCAATTACTTTTTAAGGAATTTGATTAAAAAGCAATTTGTAAAGGCAAT
TCTTTGTTAAAAGTGTAAAGGAACCTGAAACGTAACTTTCATGCTCAAAT
ACCAAAATCAATTTTTTTACTATGGTTAGAGCCACTGTCAGCCGAGAAAT
TGTCAGCCACGATTAGAGATGAAACGCCCCTATGGGCGCATGGGTCGTGG
TGCTCCTATGTCCTTATTTGCTGTATACAGTCAAAAATGAGCGTGACATA
ACGTACGACGAGTACGTCCTCAGGAATGGCCGAATATCTGCTTATTCACT
CAACTCTAATAAACTCTCTTTTTTCCAACAGGTCAAATCAAGTTGAGTGA
CAGAGTATTTGGTCCAAACGGCATCCTTGGAAATGAATACAACAATGGAG
AGTATAGCGCTAGAGAGCTCTTCATCACCGTGCTTCATTTACTGGAGCAT
ACAGCAGGAGGGACCACGTGGAATAACAAAGGCGGTGATGGAAGCTCTGA
TCCAATGTTTCAACATACCACCTTCTCTCACAAACAGCTCATTGATTGGG
TGCTCAAGACTCGTGAACCGAGTCACTGGCCTGGTTCAATCTACAGTTAT
TCCAATTTTGGTTATTGCATCTTAGGACGTATCATTGAAAAAGTAACCGG
TGTCACGTACAGCAAATACGTCCGAACGAAGATCATGGAGCCCGCCAAAG
CGGAAAACATGTACATCGCTGGAAACACGTACGCCCAAAAAAGACCGATG
GAAACACGGTATTATTCGGGTGACGGCAATCCGTACACTATGAACGTGCA
CCGAATGGATTCACACGGCGGATGGATTACAAACCCGATCGACCTTCAGC
GGTTCATGGTCCACTATGACAGTTTGTCAACGGTTGATGACTTGCTCAAG
GAAAACACCATTCTGAACATGGTTAAACCGTCAGTTCGAAATGCAGGCAA
ATGCAAAGGTGGATGGTCCATCAATGCATTGAGAGATTGGTGGTGGCACG
GAGGCTCCTTACCTGGCACCATGACTGTTCTGGTGAGATTGGATGAGGTT
CGTGGGTTGACTTGGTCCTTCTTTGTCAACAAAAGGGGGAGCGGTGAAGT
GGATCCATTGATGTGGAAAGTTGTCAATGGAATCACTGCTTGGCCAAGTG
CTGGTGTTGACTTATTTTAA Coding sequence (CDS) from alignment at sc0000007_pilon:966499..968968- >XLOC_042543 ID=XLOC_042543|Name=XLOC_042543|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3858bp|location=Sequence derived from alignment at sc0000007_pilon:966499..968968- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATAATCATATTATCCTATTATCGTTTTTGATACTATGCTGTTACGC
TTGTTATGGCAACACACAATACATTGCCAAACATGATATGACATCATCGA
GTTACCAGCAAGAGTTCAGCAAATTGCACCATAAAGGATATCGGTTGAAG
CAAGTCAGTGGTTACTCTACATCACAAGGGTACCCAAGGTATGCCGCCAT
CTGGGTGAAAAATAGCCGCCCCAACATCGCATACAAGGCGAAACATGGAA
TGAGCAGCAAGGATTACCAGGAAGAGTTTCAAAAGAACCGTCTTCTCTAT
CGTCTGGTCATGATCGAAGGCTATCTTGTGAAAAAAGACAACAAATGGGA
AGCTCACTATGCAGCTATTTGGCACAAGAAAACATCGCTAGGAGCAAACC
AACCAGCTTACAAAACACACCATAAAATGTCATCAAGGACTTACCAGACC
CTATTCAACAAATACAAAATGCAAGGCTATCGATTGACTTGGGTTAGTGC
GTATACTATTGGCAAGAAAAGCGACTACTATGCAGCAATATGGGAAAAGA
GATCAGGCCCTACCATGATCACTCGCCATCGAATGACCAGTTCTCAATAC
CAATCTTACTTCAACATATACACTCGTAGAGGATATCATTTGACACTGGT
GGATGGGTATCAGTTGGATGGAAGTGCGAGATATGTTGCCATATGGGAAC
GGATAGGTGGCGCAAGATCTGCTCGCCATGGTTTGATAGAGCCCAACTAT
CAAGCAGCTTTCGATAACCAGAAGTACCGTGGTTATAACCTCAATATTGT
CTCTGGATATTTAGTAGGATCGACCAAACGATACGCTGGTATTTGGATCA
ACAGTGGAATCTGGACCACTCAAAACCTTAATCATATTGATAGCACAGTG
AAAGATTTCCTCAAAGAAAACCAAATTCCTGGAGGTTCTTTAGCCATTAC
ACGGCATGGAAAACTGGTCTTTGCTCAAGGCTACGGAAATGTGAATACTG
GTTTAGATGCTTCACCAAGTCACCTTTGGAGGATTGCCAGTATTTCAAAA
CCAATCACTGGCGTGGCCATCATGAAGCTGATTGAAGACGATGGATAATC
ATATTATCCTATTATCGTTTTTGATACTATGCTGTTACGCTTGTTATGGC
AACACACAATACATTGCCAAACATGATATGACATCATCGAGTTACCAGCA
AGAGTTCAGCAAATTGCACCATAAAGGATATCGGTTGAAGCAAGTCAGTG
GTTACTCTACATCACAAGGGTACCCAAGGTATGCCGCCATCTGGGTGAAA
AATAGCCGCCCCAACATCGCATACAAGGCGAAACATGGAATGAGCAGCAA
GGATTACCAGGAAGAGTTTCAAAAGAACCGTCTTCTCTATCGTCTGGTCA
TGATCGAAGGCTATCTTGTGAAAAAAGACAACAAATGGGAAGCTCACTAT
GCAGCTATTTGGCACAAGAAAACATCGCTAGGAGCAAACCAACCAGCTTA
CAAAACACACCATAAAATGTCATCAAGGACTTACCAGACCCTATTCAACA
AATACAAAATGCAAGGCTATCGATTGACTTGGGTTAGTGCGTATACTATT
GGCAAGAAAAGCGACTACTATGCAGCAATATGGGAAAAGAGATCAGGCCC
TACCATGATCACTCGCCATCGAATGACCAGTTCTCAATACCAATCTTACT
TCAACATATACACTCGTAGAGGATATCATTTGACACTGGTGGATGGGTAT
CAGTTGGATGGAAGTGCGAGATATGTTGCCATATGGGAACGGATAGGTGG
CGCAAGATCTGCTCGCCATGGTTTGATAGAGCCCAACTATCAAGCAGCTT
TCGATAACCAGAAGTACCGTGGTTATAACCTCAATATTGTCTCTGGATAT
TTAGTAGGATCGACCAAACGATACGCTGGTATTTGGATCAACAGTGGAAT
CTGGACCACTCAAAACCTTAATCATATTGATAGCACAGTGAAAGATTTCC
TCAAAGAAAACCAAATTCCTGGAGGTTCTTTAGCCATTACACGGCATGGA
AAACTGGTCTTTGCTCAAGGCTACGGAAATGTGAATACTGGTTTAGATGC
TTCACCAAGTCACCTTTGGAGGATTGCCAGTATTTCAAAACCAATCACTG
GCGTGGCCATCATGAAGCTGATTGAAGACGGTCAAATCAAGTTGAGTGAC
AGAGTATTTGGTCCAAACGGCATCCTTGGAAATGAATACAACAATGGAGA
GTATAGCGCTAGAGAGCTCTTCATCACCGTGCTTCATTTACTGGAGCATA
CAGCAGGAGGGACCACGTGGAATAACAAAGGCGGTGATGGAAGCTCTGAT
CCAATGTTTCAACATACCACCTTCTCTCACAAACAGCTCATTGATTGGGT
GCTCAAGACTCGTGAACCGAGTCACTGGCCTGGTTCAATCTACAGTTATT
CCAATTTTGGTTATTGCATCTTAGGACGTATCATTGAAAAAGTAACCGGT
GTCACGTACAGCAAATACGTCCGAACGAAGATCATGGAGCCCGCCAAAGC
GGAAAACATGTACATCGCTGGAAACACGTACGCCCAAAAAAGACCGATGG
AAACACGGTATTATTCGGGTGACGGCAATCCGTACACTATGAACGTGCAC
CGAATGGATTCACACGGCGGATGGATTACAAACCCGATCGACCTTCAGCG
GTTCATGGTCCACTATGACAGTTTGTCAACGGTTGATGACTTGCTCAAGG
AAAACACCATTCTGAACATGGTTAAACCGTCAGTTCGAAATGCAGGCAAA
TGCAAAGGTGGATGGTCCATCAATGCATTGAGAGATTGGTGGTGGCACGG
AGGCTCCTTACCTGGCACCATGACTGTTCTGGTGAGATTGGATGAGGTTC
GTGGGTTGACTTGGTCCTTCTTTGTCAACAAAAGGGGGAGCGGTGAAGTG
GATCCATTGATGTGGAAAGTTGTCAATGGAATCACTGCTTGGCCAAGTGC
TGGTGTTGACTTATTTTAAGTCAAATCAAGTTGAGTGACAGAGTATTTGG
TCCAAACGGCATCCTTGGAAATGAATACAACAATGGAGAGTATAGCGCTA
GAGAGCTCTTCATCACCGTGCTTCATTTACTGGAGCATACAGCAGGAGGG
ACCACGTGGAATAACAAAGGCGGTGATGGAAGCTCTGATCCAATGTTTCA
ACATACCACCTTCTCTCACAAACAGCTCATTGATTGGGTGCTCAAGACTC
GTGAACCGAGTCACTGGCCTGGTTCAATCTACAGTTATTCCAATTTTGGT
TATTGCATCTTAGGACGTATCATTGAAAAAGTAACCGGTGTCACGTACAG
CAAATACGTCCGAACGAAGATCATGGAGCCCGCCAAAGCGGAAAACATGT
ACATCGCTGGAAACACGTACGCCCAAAAAAGACCGATGGAAACACGGTAT
TATTCGGGTGACGGCAATCCGTACACTATGAACGTGCACCGAATGGATTC
ACACGGCGGATGGATTACAAACCCGATCGACCTTCAGCGGTTCATGGTCC
ACTATGACAGTTTGTCAACGGTTGATGACTTGCTCAAGGAAAACACCATT
CTGAACATGGTTAAACCGTCAGTTCGAAATGCAGGCAAATGCAAAGGTGG
ATGGTCCATCAATGCATTGAGAGATTGGTGGTGGCACGGAGGCTCCTTAC
CTGGCACCATGACTGTTCTGGTGAGATTGGATGAGGTTCGTGGGTTGACT
TGGTCCTTCTTTGTCAACAAAAGGGGGAGCGGTGAAGTGGATCCATTGAT
GTGGAAAGTTGTCAATGGAATCACTGCTTGGCCAAGTGCTGGTGTTGACT
TATTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:966499..968968 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1093-1929:838 |
| Aaloc | 1-1089:2471 |
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