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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:912252..917340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042538 ID=XLOC_042538|Name=XLOC_042538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5089bp|location=Sequence derived from alignment at sc0000007_pilon:912252..917340- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGTAGAAAAAGTAGCATTTGTGGTTTTGCTATTTTGTTGTTTCAA
CTATGTATATCCGAATAGCGTGTCGAAACAACAGAAAAAGAATACCCTTG
ATGAAGGTAAGAAGAATACACTTTCGGTAATAAATCCTGACCATCAAAGT
TTCTAGAAAAGGTTCCCTATTTTTTTAGCCTAAAACAGATCATTATAATG
ATGCCAAGATTTGATTTTCATTTGCTCTTGTTCCCAGGAATCCACAAAGA
AATTCAAGTCTCTCAAAAGGTCTTTTCTTACACTTTTCAAAAACTGCCCA
CTGGAGAGGTAATGAAATGTTTGATTAGTGACGATTACGATGGCTGTTTT
AATTATCCGGAAAGGCCTTATACTAACATAAGATGTATACCTTGAATACT
GTACCTAGTTAGCCAAAAGGTATATATTATAAACTAACAATGCATAATTC
TTATACCTTATATACAGAAACCTTCAAAAGTAAGCGCGCCATACAACAAG
GTCCACAAGACTCACTGAAATGTAAGCATATTTTCCAATTCGTCAACTTC
CAACAAAGTGCTAACGATTACTAATGAGTAAACTCAAGTATGTCAAGGGA
AACCATGACCATTAACGGCCCTAAAAAGCCTTAAGAGACATATAATGAGG
AGTGACAAAAAGGGGAAAGTGTTAGAAACAACACTCATAACATCCATACA
ACGTTAGTTGAAGATGTGTGCTGTCTGTGATTGGTTGATTTTGATACCAA
GGAAACAGAAATCCTCAATCCCATTCCCCTGCAAAAAAAAGTGGTAAGCA
GTAAGAATTAAAAAGATGCTTTCTCCACTAGATACTGTCAACAGTCTATT
GAGAGGAATGGAATTGAGTCAGCTGAAAAGATCAGTGGATTCACAGCTCT
CAAGTATCGATATTTCGATGTTTACAAAGCCTGCCGAGAGGGATGACGAT
GACGTCGACAAGAAGATCCCGGAATGGTTAGCATCAGTGAATGCAAGGAT
CCCAAACGGTGCTCAAGTGAAAAAGGATAGCATTACTACAAGGACTCTTG
ATTCTGATAAGGCTCTCGAGAATCTCTTACAAGCCGAAGCCGAAAAGGAA
ATCGCTAAAAAGAAGGCGCAATTCAAGAAGAGTGTAGAAGCAAATGAGCA
AATTGACGTTGAGTCAAAACGATTTCTCGAAAAACTTTTTTCAGAAGCAG
AAGCACAAGAAAAGAAGTCCAACATTCCAAAAGAGGTGTCGAAAACCATT
CCAAAAGAGGTGTCGAAAACCATTCTAAAAGAGGTGTCGAAAACCATTCC
AAAAGAGGTGTCGAAAAACATCCCGAAATTGAAGATCGCTAAGAAGGGTG
CTGAGGAGAGTAAGCATATTGACGCCGAATCCAAAGCACTTTTGGAGAAG
CTTTTTGCTGAATCAAAGAGAGATGTGGCAAAGACAGAAAAATTATCGGA
GAAAGAAATACCGAAATCCAAAGAGGCAAAAAAGACTGTAGAAGCAATCT
CTCAACTCGATATCAAATCTAAAAATTTTCTTGAAAAGCTTTTAGCTGAG
AATCAGAATAAGAAAGAGATACCAAAAAAGGAGGTTCATCAAATACCCAC
AAAGAAACATCTACCTGAGTTTCTGAAGGAAGCAATAGCTGAAAACAAAG
AGGTCAATCGAAGACTAGCAAAGGAAATGGCAACGAACAAAGTTTATGCG
ACGTTTGGTGCTACTGAAAAGAAAACAGGTTTTTATCTTCCTATATTCAT
CCTCCAAAGCTCCTTGAGTGACTGAAAACTTTATTGTTAAACCTAAAATT
GCACATAAAAAATCTGATTCGTCAAAGCATTTTGAAAATACATTTAACTT
GCCAACAAAATCTTTGGGTTTGATCCTTAGATTACAAAAAACTCCCGCTT
TTCAATTTTTTTGAAAGTTTCTTAGTTTGTCAAGTTCATCCTCATTTAAG
ACTCTTCAAGCTAAAAGTCTTTCTACACACTGTTTTAGTGGAACGATTTA
TGGATGCTTTGAAGAAAATTTCAGAAGAAGAAACAAAATTGAAAGTGAAG
AAGGAGTTGAAGCAAATTAAATCAAAGAAGTCCACGAAAAATACTCTTTG
TAAGTTTTCTGATTAATGTCCAGCCCTCATACCAACCACCGTTGCTACTA
AACTTACCAAAATCTTTAAACCTAATTATTCTCAAATATCTTTATTTCAT
AATACCACCAAATGAAATTGGTATTTTTTTCAAATCCATCTTAATGCGTC
CCTTACTGTATAGATGTAATCGACGAAAATGAGAAATGCGTAGACCAAGA
GAACGACTGCGGAGAATATCAGGAGTATTGTCATGTCTACAAAACAACTA
TGAAACAACATTGCAGAAAGACTTGTGGATTTTGCACCACTGGTAAGAAA
GTTACGTTTGGAACCAGCGCATGACACAACTGTTTGCCTGTCGATGTTCT
TGAGACTTAAGAAACCCTCCAAAATGAGAAATTAGTTACCTTCTAAAGTA
ACCATCCGTAATTGATTCTTGGATGGACATCAATCAAGAAATGCTCGTGT
CCAATAACCACTTACTATCACCTGATAGATAATGTAGAAAAAGTTTAAAC
AAATAACGCAACACTTAGTTATGTTTCATTCAAAATTCGTCCCAATTTAG
AGGTATTAAAAAGAAATTAATTAATTTATCAACGAGTGCGTTTTTATAGG
TTGCGGTGCGGATAAGGAAGATTCACTATGCAAGGTGATCAAACAGCTCG
GATATTGTGGTCGACCGACAGCTCAAATGAAATGCCCAGAGACTTGCCAG
TGTGGTAAGATTATTTCTATTTTTATGAGTAAGACTTTTCAAATTTCTAT
GGTTCTTCTTCGTTCACCCCATAGTTGCGCTTAAATGCAAGTTAAGGATT
AAAAACGAGTACTCTTTTTTATAAGCAACTCCAATTTTCGGGTCAGGGCT
GGGGTTGCTAAGCATTCTAGCTCATTTTCTGAAAATTTTACTTTGACTAC
CCCTGATATTATTTATACACATTTATGCTTATTGGGTCAAGGGATATCGT
TTGCCATGCTTGATTAACTAAAAAGCTTTTACTTTACCTACGGGATAGCG
AAAAAAAATCGCAAATTCCAGGGCTCGAGCCTTAGCAACCTGGTTTCTTA
AAAAAGGCGTAGGGAGTCCCAAAAAAAATTTATTAACGTTTTGTAAATCA
TTAACAGTAAATATTTTGAAATAGAAATGATTAAGCGTGTGAAATTATTC
AATTATCTCCATACATAATCCGATTTTAAAACGGGCGAACAAATCCTTAC
CCGAAATAAAAAGGAATTACATGTTTTTTTCTCTAATCATCGCTGAGATA
TTCTTTTATTTACTTAAAATGATGAAGTTACTCCTTTCTAATGAGCTTTA
AAGAGTAAATTGTTTCTATGGTAATGCATTGCACATACCACAAGGGCAAC
TTTCAAAACAAGTATTAAAAAGAGGGTCTGGTAGATTCGTGTAAACATCC
CCTGCAGTGTCTGTGGATTGATATACACCTAATTCAGTCATATGAGAGCT
GCTCAATTAAGACTCGTGAGAAACCAAAGGAAGCTTATTATTCCCTGTAA
GGTGGATTTTTTAGTTTCACATCGAGATATTAATTAACTTTGGCATTAAA
ATATTCAACTTCAATGAAAATTAATTCACAGCGAATTTCATTCCTTCCTA
AAACCTAAAATATTATGCATACTTATTTTTAGAGCAATGTAAGAACAGTA
TTTATGGATGTTGTTGGGACAAAAAGACAATTAAAGATGACTACATTGGT
AGCAATTGCCCTGGTAAGGTTCCCACTGTGTCTAGACTACTGGAATTCGT
TCAATGACTCAGTTGGTTGCTGTAAAACAGATAGCTATTTTAAATCAAAT
ATCATATTCAGCTAATACAACATATTTTAGATCCAAAAGTGAGACTGTAA
ACTTTAAATTGAGATTAGGATTTATTGACATGCATGTTACCGATGAAAAG
AAAACGAACCACTTAATTTGGGTACATTAAGAGTAAAGAACACCAAACAT
TTAACTCTCTCGTTCTTAAATGATAGATTGAATAAGCGAAGGAGTGTTTA
ACCAACTTGCTTTTCTTTTTTGCAGTATGCGAGAACAAGTATGAGCATTC
AACATGCATGATGTTCATCGAAGATTGCCATTCGAACAACATGGTGACAA
AGAAATGGATGTATACAAATTGCATGGAAACTTGCGGACTGTGTAGAGGC
AATAACATACAACCTGTCCATCCAAACGCAGTTGGTAGGTACAGTTAGTA
AAATAGTCGAACATACACAGCGCACTAGACTCAACTTCAGTAGCTTCGAA
TTATTCGCAGGCCCGATTGTAGTAAAACAAACCAATAGATAAGTGTCCAG
GCCCCAAACTTCAACATTTTTGAAAATGAAGAAAAACACCCCCAGATATT
CACCAAAAGAATAAGTGTGCAAAATTTCAGTCAAATACAACGTTTTTTGA
AGTCTACAGGCTACCCCAAAGTTTCAACCTCTTTTTGGCGAAAAACTCAT
CTCCAGGTCCCAAAAATCGAAATTTTTGGAAATGAAAAAAAGAAACACCC
GCAGAGACTCACCGAAGAAACAAGTGTGTCAAACTTCAGCCAAATCACAT
ATTGTCAGATTCTAGCTCAACTTTATGAAAAAGTCATGGGGGTTCATATC
CATCCGTAGACCTCTAATTACAAGACTCTGAAATAAAATTATGTACATCA
CAAATTGACACCTTCAAGAAACTGGGGATGGAAACGTACGGATCAGAAAT
GTTCCTTAGAAAAGGAAAACCTTTGTCAATGAATGGTAGTATTTAAAAGG
GACTCTTATAAATCGCCTTTCCAATCAATACATACAAGCAGATCAATTAA
CAACAATTTTTATCTCAAAACACAGGTTCATCACACATCAAGACATGCTC
AGACGATGAAGAGCAATCTGAATTCTGCCCAATATGGAGAAATGCTGGAT
GGTGCGAAGAAAAGATGGAACTGATGCAAAGCTATTGTGAAAAAACTTGC
TATAATTGTCTATCACAGTACAATAATAACACAAGATGA Coding sequence (CDS) from alignment at sc0000007_pilon:912252..917340- >XLOC_042538 ID=XLOC_042538|Name=XLOC_042538|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3612bp|location=Sequence derived from alignment at sc0000007_pilon:912252..917340- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGAGTAGAAAAAGTAGCATTTGTGGTTTTGCTATTTTGTTGTTTCAA
CTATGTATATCCGAATAGCGTGTCGAAACAACAGAAAAAGAATACCCTTG
ATGAAGATGAGAGTAGAAAAAGTAGCATTTGTGGTTTTGCTATTTTGTTG
TTTCAACTATGTATATCCGAATAGCGTGTCGAAACAACAGAAAAAGAATA
CCCTTGATGAAGAAACCTTCAAAAGTAAGCGCGCCATACAACAAGGTCCA
CAAGACTCACTGAAATAAACCTTCAAAAGTAAGCGCGCCATACAACAAGG
TCCACAAGACTCACTGAAATATACTGTCAACAGTCTATTGAGAGGAATGG
AATTGAGTCAGCTGAAAAGATCAGTGGATTCACAGCTCTCAAGTATCGAT
ATTTCGATGTTTACAAAGCCTGCCGAGAGGGATGACGATGACGTCGACAA
GAAGATCCCGGAATGGTTAGCATCAGTGAATGCAAGGATCCCAAACGGTG
CTCAAGTGAAAAAGGATAGCATTACTACAAGGACTCTTGATTCTGATAAG
GCTCTCGAGAATCTCTTACAAGCCGAAGCCGAAAAGGAAATCGCTAAAAA
GAAGGCGCAATTCAAGAAGAGTGTAGAAGCAAATGAGCAAATTGACGTTG
AGTCAAAACGATTTCTCGAAAAACTTTTTTCAGAAGCAGAAGCACAAGAA
AAGAAGTCCAACATTCCAAAAGAGGTGTCGAAAACCATTCCAAAAGAGGT
GTCGAAAACCATTCTAAAAGAGGTGTCGAAAACCATTCCAAAAGAGGTGT
CGAAAAACATCCCGAAATTGAAGATCGCTAAGAAGGGTGCTGAGGAGAGT
AAGCATATTGACGCCGAATCCAAAGCACTTTTGGAGAAGCTTTTTGCTGA
ATCAAAGAGAGATGTGGCAAAGACAGAAAAATTATCGGAGAAAGAAATAC
CGAAATCCAAAGAGGCAAAAAAGACTGTAGAAGCAATCTCTCAACTCGAT
ATCAAATCTAAAAATTTTCTTGAAAAGCTTTTAGCTGAGAATCAGAATAA
GAAAGAGATACCAAAAAAGGAGGTTCATCAAATACCCACAAAGAAACATC
TACCTGAGTTTCTGAAGGAAGCAATAGCTGAAAACAAAGAGGTCAATCGA
AGACTAGCAAAGGAAATGGCAACGAACAAAGTTTATGCGACGTTTGGTGC
TACTGAAAAGAAAACAGATACTGTCAACAGTCTATTGAGAGGAATGGAAT
TGAGTCAGCTGAAAAGATCAGTGGATTCACAGCTCTCAAGTATCGATATT
TCGATGTTTACAAAGCCTGCCGAGAGGGATGACGATGACGTCGACAAGAA
GATCCCGGAATGGTTAGCATCAGTGAATGCAAGGATCCCAAACGGTGCTC
AAGTGAAAAAGGATAGCATTACTACAAGGACTCTTGATTCTGATAAGGCT
CTCGAGAATCTCTTACAAGCCGAAGCCGAAAAGGAAATCGCTAAAAAGAA
GGCGCAATTCAAGAAGAGTGTAGAAGCAAATGAGCAAATTGACGTTGAGT
CAAAACGATTTCTCGAAAAACTTTTTTCAGAAGCAGAAGCACAAGAAAAG
AAGTCCAACATTCCAAAAGAGGTGTCGAAAACCATTCCAAAAGAGGTGTC
GAAAACCATTCTAAAAGAGGTGTCGAAAACCATTCCAAAAGAGGTGTCGA
AAAACATCCCGAAATTGAAGATCGCTAAGAAGGGTGCTGAGGAGAGTAAG
CATATTGACGCCGAATCCAAAGCACTTTTGGAGAAGCTTTTTGCTGAATC
AAAGAGAGATGTGGCAAAGACAGAAAAATTATCGGAGAAAGAAATACCGA
AATCCAAAGAGGCAAAAAAGACTGTAGAAGCAATCTCTCAACTCGATATC
AAATCTAAAAATTTTCTTGAAAAGCTTTTAGCTGAGAATCAGAATAAGAA
AGAGATACCAAAAAAGGAGGTTCATCAAATACCCACAAAGAAACATCTAC
CTGAGTTTCTGAAGGAAGCAATAGCTGAAAACAAAGAGGTCAATCGAAGA
CTAGCAAAGGAAATGGCAACGAACAAAGTTTATGCGACGTTTGGTGCTAC
TGAAAAGAAAACAGTGGAACGATTTATGGATGCTTTGAAGAAAATTTCAG
AAGAAGAAACAAAATTGAAAGTGAAGAAGGAGTTGAAGCAAATTAAATCA
AAGAAGTCCACGAAAAATACTCTTTTGGAACGATTTATGGATGCTTTGAA
GAAAATTTCAGAAGAAGAAACAAAATTGAAAGTGAAGAAGGAGTTGAAGC
AAATTAAATCAAAGAAGTCCACGAAAAATACTCTTTATGTAATCGACGAA
AATGAGAAATGCGTAGACCAAGAGAACGACTGCGGAGAATATCAGGAGTA
TTGTCATGTCTACAAAACAACTATGAAACAACATTGCAGAAAGACTTGTG
GATTTTGCACCACTGATGTAATCGACGAAAATGAGAAATGCGTAGACCAA
GAGAACGACTGCGGAGAATATCAGGAGTATTGTCATGTCTACAAAACAAC
TATGAAACAACATTGCAGAAAGACTTGTGGATTTTGCACCACTGGTTGCG
GTGCGGATAAGGAAGATTCACTATGCAAGGTGATCAAACAGCTCGGATAT
TGTGGTCGACCGACAGCTCAAATGAAATGCCCAGAGACTTGCCAGTGTGG
TTGCGGTGCGGATAAGGAAGATTCACTATGCAAGGTGATCAAACAGCTCG
GATATTGTGGTCGACCGACAGCTCAAATGAAATGCCCAGAGACTTGCCAG
TGTGAGCAATGTAAGAACAGTATTTATGGATGTTGTTGGGACAAAAAGAC
AATTAAAGATGACTACATTGGTAGCAATTGCCCTGAGCAATGTAAGAACA
GTATTTATGGATGTTGTTGGGACAAAAAGACAATTAAAGATGACTACATT
GGTAGCAATTGCCCTGTATGCGAGAACAAGTATGAGCATTCAACATGCAT
GATGTTCATCGAAGATTGCCATTCGAACAACATGGTGACAAAGAAATGGA
TGTATACAAATTGCATGGAAACTTGCGGACTGTGTAGAGGCAATAACATA
CAACCTGTCCATCCAAACGCAGTTGTATGCGAGAACAAGTATGAGCATTC
AACATGCATGATGTTCATCGAAGATTGCCATTCGAACAACATGGTGACAA
AGAAATGGATGTATACAAATTGCATGGAAACTTGCGGACTGTGTAGAGGC
AATAACATACAACCTGTCCATCCAAACGCAGTTGGTTCATCACACATCAA
GACATGCTCAGACGATGAAGAGCAATCTGAATTCTGCCCAATATGGAGAA
ATGCTGGATGGTGCGAAGAAAAGATGGAACTGATGCAAAGCTATTGTGAA
AAAACTTGCTATAATTGTCTATCACAGTACAATAATAACACAAGATGAGT
TCATCACACATCAAGACATGCTCAGACGATGAAGAGCAATCTGAATTCTG
CCCAATATGGAGAAATGCTGGATGGTGCGAAGAAAAGATGGAACTGATGC
AAAGCTATTGTGAAAAAACTTGCTATAATTGTCTATCACAGTACAATAAT
AACACAAGATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:912252..917340 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1645-1806:163 |
| Aaloc | 1486-1641:963 |
| Aaloc | 1405-1482:1356 |
| Aaloc | 1300-1401:2389 |
| Aaloc | 1171-1296:2825 |
| Aaloc | 1060-1167:3100 |
| Aaloc | 163-1056:4257 |
| Aaloc | 109-159:4621 |
| Aaloc | 1-105:5090 |
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