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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:1067722..1070726+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042525 ID=XLOC_042525|Name=XLOC_042525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3005bp|location=Sequence derived from alignment at sc0000007_pilon:1067722..1070726+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTCATAAAGAAATTTATCATTCTTTTATACTGTTTTTcaggaaacaa
aaaaatgttgttgGTTTCATGTTGCGCATTACTGGTCAGTGTTGTTTATG
GACGACAGATCGAGGACTTACAAAACCTTCTCAACGCTGGTAATGTTGGT
TTAGACGATAACCACGTGGTGAGAGATTCAGGGAATGAACTAGCAGGAAT
GATAGGTAAACCATCTCAAGATGTGTCAGAAGCAGAGTTTAACAAAGATG
TCAGTTCGTTAGCACAGGCCGGTATTGGAAAGAATTTCGAGGCTAAAGAT
GATTATGATTCATCAATTAAAGAGTTATTAAATTCTTTTCAAGCTGACGA
TAAAAATGGAAATGTTTTTCACCATGGAGAGGAAGGTAATGATTATCGAG
TTCGGTCCCATGCTTGTCGAGTTCAGCGTCGCttgtttaaattttgaaag
CGTAAAGAACTCGTCACAAAAGTTAACCAATCTTGGATGCTAAACCAAGC
CAAAAAGCCTTCTTTATCTTCTCCATTTTTCATAAAGTCCGAGTCAATTT
GATAATCCAATGTTTACCACTTCCATTCCAGATTCCAGTTTTAGCGCATT
CGGTAAAAATCGAAATGGTCTCGGAGCTCTTGGGTCCCTTGAAGAAGAAC
TGTTCTTAAAACAAGAGGAGAAGGCTCGGTCCCGTGACGGTGGTATCGGA
GGTATGGGACCGAGTATGTATCCATGCAACGATTACGAAGTAACGAAAGA
AGTAACGATGGGAATATCAATAGGTGGACGAAAAGAAGGCGACTTATTAA
TCGGATTGTTTGGATGTGCTGTACCCAAAACTGTGGCCAATTTTGTGGCA
CTCGCCAATCATGAGGTGAGAATCATTATTACTTGGCTCTCACAAGCCAA
AGTTAATAAACAGCATTAATGACTTGAACGGGCAATAGGGTAtcccttca
aaatatttttcaatcaataATGCTGACTTCTTATGGAGCTACTTCGAACT
ACTActtcttgtatttttttattctagTATGGGTTTGGTTTTCGTGGCAG
CAAATTTCATCGAGACATCAAGGATTTCATGGTTCAAGGTAACAGAACAA
AATAGCATCATTTTCTACAAAGAGATCAAACAACATATTCTGCCTTTCTG
CCATATGGAAAACACATTGGACTTTCCAGTTTCTCACAATAGGGTGTTAT
TATACTGGAAGAGAACAATCACTGTAACTCTAAAGTATGATTCGAAATTT
TCAGGCGAATACATTTTAAGATGACATTTTAATTACAGATTAACAGTCAA
TTAGCATTTCTCCTTCTCCCTTCTAACAGGTGGTGATATAACGAACGGAG
ATGGAACTGGTGGTAAAAGTATTTATGGTGATCACTTTGctgatgaaaat
ttcaaaatcacccctaacGGTCCAGGTAGGTGCATTCTGTGCTAATTCAA
TGATCTCACGACATACAAATGCAACTATCAACCGTTAAAGCATGGGGAGC
TAGAGTTTACCAGAAAGGAGCGACAAACGAATCAATGCAATAATTTCAGA
TATTTTGACGTCATTGCTCGAACCCAGTCTCCTTGTGTTTTATTGGTTTA
GGATAGGTTCCACTCCTAAtcatcaaaaatgttggattttAAAGCAACCA
CCTTTGTTTCACGTGGAGAAATTTATGTAATGCTAATTATATCCAGTTAT
AGAAAGGTGTCAAGTTTGAAATAAGTTTGCTTAAGTTagatcatgaacat
ataaacgactggacatctatcttttattatctctttgaagcgagcttcgt
tgccgcctgtatttcaaaattgctataaaaaatccgacaatattccgtcg
taattttatttctttgatttgtttaggtaaaatgattgatagagcttgaa
cattactcctaatgcacaaaaaaattattttcaaattttttcacgaacat
ttcatcaacattttcaactctgaaatgcagaatttcaactgcgtgtatac
ttttgaatcccttttgtcactccaataattttttttctgacttgaaaaaa
atagcttgccaaagttgagagcctgtgtcataagaatattaaaattagaa
tgtgacactctctaAaattattagacacttttaagtcaaaatttggaaat
attagtcggagttttgacaagctgacgatgattttgcctctgttatattt
gttatgatatagataaaagacttgagaaaagtagaacaacaaagactttt
gtcgaaattttgacgttgttagcaaggtattcccaagaggtataccatca
gaatttattgtttcatttgatgattttaacgaggcggcaacgaagctagc
agtgttatcttcaaaaatacaaaggagatggatgtccagtcgtttatatg
ttcatggttagATATAAATCGTTAATTTGATTGTCAATACTAGGTTGGCT
ATGTATGGCAAACGCTGGTAAAGATACCAACGATTCACAATTCTTTATCA
CCACAGCTGACACACCTTGGCTGGTTGGAAAGCATGTCTGTTTTGGAAAG
CTTCTCGATGGATGGGTGAGTACGATTCATCTATACCTTACTTTCATTAC
ATAGAACATCTCTGTGAAATCAAGTAGCACCAAATGTCTCTTagttcttt
tgtcttttttggtTAGATCAGACTAAAGCCGTGTTTTATCAGGTCTGTCA
TCTAATACTTTCATATTGACTCCACTACTGGttctaataaataaatttat
gtcaatattgattttgatatacgTATTCTGTTGAAACAGATTTAACGGTG
CATTTGGACgttattgaataaaaaaattccatctCTCTTTTAGTGTACCG
TGGATAAAGTGCAGAACCTGAGAGTTGACCCAAGCAACAATAAACCTTAC
GAGGACGTGGTCATCACAGACAGCCGATCACTGGATACAAAGCAATTCCC
TGTCAGTCAACAGCCTATCAACCCAAGCACTCGAAACTGCAACTCTTACT
ATTAA Coding sequence (CDS) from alignment at sc0000007_pilon:1067722..1070726+ >XLOC_042525 ID=XLOC_042525|Name=XLOC_042525|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2220bp|location=Sequence derived from alignment at sc0000007_pilon:1067722..1070726+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTCATAAAGAAATTTATCATTCTTTTATACTGTTTTTcaggaaacaa
aaaaatgttgttgGTTTCATGTTGCGCATTACTGGTCAGTGTTGTTTATG
GACGACAGATCGAGGACTTACAAAACCTTCTCAACGCTGGTAATGTTGGT
TTAGACGATAACCACGTGGTGAGAGATTCAGGGAATGAACTAGCAGGAAT
GATAGGTAAACCATCTCAAGATGTGTCAGAAGCAGAGTTTAACAAAGATG
TCAGTTCGTTAGCACAGGCCGGTATTGGAAAGAATTTCGAGGCTAAAGAT
GATTATGATTCATCAATTAAAGAGTTATTAAATTCTTTTCAAGCTGACGA
TAAAAATGGAAATGTTTTTCACCATGGAGAGGAAGATTTTCATAAAGAAA
TTTATCATTCTTTTATACTGTTTTTcaggaaacaaaaaaatgttgttgGT
TTCATGTTGCGCATTACTGGTCAGTGTTGTTTATGGACGACAGATCGAGG
ACTTACAAAACCTTCTCAACGCTGGTAATGTTGGTTTAGACGATAACCAC
GTGGTGAGAGATTCAGGGAATGAACTAGCAGGAATGATAGGTAAACCATC
TCAAGATGTGTCAGAAGCAGAGTTTAACAAAGATGTCAGTTCGTTAGCAC
AGGCCGGTATTGGAAAGAATTTCGAGGCTAAAGATGATTATGATTCATCA
ATTAAAGAGTTATTAAATTCTTTTCAAGCTGACGATAAAAATGGAAATGT
TTTTCACCATGGAGAGGAAGATTCCAGTTTTAGCGCATTCGGTAAAAATC
GAAATGGTCTCGGAGCTCTTGGGTCCCTTGAAGAAGAACTGTTCTTAAAA
CAAGAGGAGAAGGCTCGGTCCCGTGACGGTGGTATCGGAGGTATGGGACC
GAGTATGTATCCATGCAACGATTACGAAGTAACGAAAGAAGTAACGATGG
GAATATCAATAGGTGGACGAAAAGAAGGCGACTTATTAATCGGATTGTTT
GGATGTGCTGTACCCAAAACTGTGGCCAATTTTGTGGCACTCGCCAATCA
TGAGATTCCAGTTTTAGCGCATTCGGTAAAAATCGAAATGGTCTCGGAGC
TCTTGGGTCCCTTGAAGAAGAACTGTTCTTAAAACAAGAGGAGAAGGCTC
GGTCCCGTGACGGTGGTATCGGAGGTATGGGACCGAGTATGTATCCATGC
AACGATTACGAAGTAACGAAAGAAGTAACGATGGGAATATCAATAGGTGG
ACGAAAAGAAGGCGACTTATTAATCGGATTGTTTGGATGTGCTGTACCCA
AAACTGTGGCCAATTTTGTGGCACTCGCCAATCATGAGTATGGGTTTGGT
TTTCGTGGCAGCAAATTTCATCGAGACATCAAGGATTTCATGGTTCAAGT
ATGGGTTTGGTTTTCGTGGCAGCAAATTTCATCGAGACATCAAGGATTTC
ATGGTTCAAGGTGGTGATATAACGAACGGAGATGGAACTGGTGGTAAAAG
TATTTATGGTGATCACTTTGctgatgaaaatttcaaaatcacccctaacG
GTCCAGGTGGTGATATAACGAACGGAGATGGAACTGGTGGTAAAAGTATT
TATGGTGATCACTTTGctgatgaaaatttcaaaatcacccctaacGGTCC
AGGTTGGCTATGTATGGCAAACGCTGGTAAAGATACCAACGATTCACAAT
TCTTTATCACCACAGCTGACACACCTTGGCTGGTTGGAAAGCATGTCTGT
TTTGGAAAGCTTCTCGATGGATGGGTTGGCTATGTATGGCAAACGCTGGT
AAAGATACCAACGATTCACAATTCTTTATCACCACAGCTGACACACCTTG
GCTGGTTGGAAAGCATGTCTGTTTTGGAAAGCTTCTCGATGGATGGTGTA
CCGTGGATAAAGTGCAGAACCTGAGAGTTGACCCAAGCAACAATAAACCT
TACGAGGACGTGGTCATCACAGACAGCCGATCACTGGATACAAAGCAATT
CCCTGTCAGTCAACAGCCTATCAACCCAAGCACTCGAAACTGCAACTCTT
ACTATTAATGTACCGTGGATAAAGTGCAGAACCTGAGAGTTGACCCAAGC
AACAATAAACCTTACGAGGACGTGGTCATCACAGACAGCCGATCACTGGA
TACAAAGCAATTCCCTGTCAGTCAACAGCCTATCAACCCAAGCACTCGAA
ACTGCAACTCTTACTATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:1067722..1070726 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 949-1110:2844 |
| Aaloc | 829-948:2446 |
| Aaloc | 733-825:1332 |
| Aaloc | 670-729:1028 |
| Aaloc | 388-669:584 |
| Aaloc | 1-384:1 |
|
