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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:943057..945735+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042522 ID=XLOC_042522|Name=XLOC_042522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2679bp|location=Sequence derived from alignment at sc0000007_pilon:943057..945735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCCACCTATGATGTAATGTCTTCAGAAGTTATCGAAAACATTTA
CGAACAACTAATATGTCCCGTCTGTCTGGACCCTTTCAAAGAACCTAAAT
TCCTGAAATGTCTTCACACTTTCTGCAATCATTGCATTCATGAGATCGTT
AATCAGGAACCGAGGGACGTCATTATTTGTCCGACATGTCGTGTAGAAAC
GCCGATCCCTGAGACGGGACTAGATGCTTTGAAGAAGAATTTCTTCGCAA
ACAGTATGCTGGACTTGGTTGCCTACCAGTACGAAGaaattaagaaagaa
aaacaaaaattgagcGATTGTGATCAGTGTGCCGATAAAGATAATGTCAG
CTCCAGGTAAGAATCGGTCAGTTTTCTTGAAGGTAATAGTGAAGGGGAAG
GTGAAGAAGTTCTTTGCTTTAGATCTATTCAATAGTGAAAAGATTCAATT
CGTACTAGACTAATTTTACAATATAGATACAGAAAGCTGTTTCCCTATGA
CTTTTATCTCAAAACTCTTTCTTCTCTACTTAAGGTGTTTGGAGTGTGAC
CTTCCACTATGCAGCATTTGCGTGGCCGATCATCGGCGAGGACATACCAC
GATGGATCATCGCATTGTCTCCACGTCTGATGAAGACTTCCATGCCGATA
AGAACTCGTCCGATCTATACACGCTGACGTTCTGTAAGTACCATACAAGA
AACGTCATCAAGTATTTCTGTAATACGTGTGACGAAACCGTTTGCCGTGT
ATGTACCATTCTCGAACATCGTGAGCACCAGTTTGTGTACCCCAAAGAAG
CCATACCTCAACAACGACCGATTATCCAAGAATTGCTCACACAAACGAAA
CAACATATCCCTGTTTTGAGACACACCTTGAAAGACATCTCTAACATGCA
GGAAGTTTTGGTGGACTGTAAAACTACATTATTGGAAGAAATCAACACCA
AGACACAACAAAAAATTGAAGAGCTTCTTGGTTGTAAAGAGGACCTTATC
GCTGACTTGGACAAAATATacaactccaaacaaaaaacattaagtCTTCA
AAAAGATTCGATTGAGTTAGAACTCGGGAAATTGGTGGGTTCGTGTGATT
TTGCACAGAATATTATTCAGGTTGGTAACGATGTTGAGATTCTAAGAATC
AAATCTCGATTGCAGCAACTCAATAAATTGGACATTAACTTAGATCCCGA
GGAAGATGATTCCATCCAGTATTTGAAGGACGAATCACCTGAATTCCCTC
TAGGATGTATTGCTGCAACTCAAACGTTTGCTTCACTTTCTTACGCGCAA
GGTGAAGCTTTCGAGACCGCCAGAGCTGGTAGCGAGACCAGTATTGTGGT
GGTGGCGCAAACCAGGCACGGTCAGAAGAACATTGGTCAAGATAAAGTGG
AAGCACATCTAGTGGCTCCTGATCAAACGAAGAAATCGATTGAAGCAACC
GATAACAGTGAGTCTTTTGTTACTTATTTCTTCACGCTAATTTCATATTG
AAAATGCTTTTACTTCTATCGAATTTATTGCTAGATGCTCTGGTTGCGcc
ttatgaaatttatttgatcACGACATAATCCCGTGCCTAGTAGAAAGCAA
TGTTCATCAAATCAAGGGTGGGTATGGAAACAAACTCCACCTCTCATACG
TACAAACAACGGCAGATACTCTAATCATCATTCGTTTATCTTTTAGATGA
TGGCACGTATTCCATCCGCTTCACACCTGATATTAGTGGGAAACACATGC
TGGAAGTCACCATCAAAGAAAAACCGATTCGGGGAAGCCCTTTTCCAATC
ATCGTCACTAATCGACGAGAATACAATGAAGTCGGGTTATCTTTATTCAA
GTTCGGGCAATACGGGTCTAAAAAGCGAGAATTCAAATCTCCTTTCGGTG
TTGCGAGTGACTCAGAGGGCTTCATGTTTGTTGCAGATAGTTATAACCAC
AGGATTCAAACCTTCGGACCAAGAGGGGAATTTATTAACATGTTCGGGTC
CCATGGGGAGAGAAAAGGGGAATTCAACTGCCCTACAGACGTCGCAGTTT
CCCCTAACAATCGGATTGCTGTTTGTGATAACGGAAACAACCGAGTGCAA
GTGTTTTCAAAACGCGGAAGTTTTATCGCTAAATTCGGTCGTGAAGGAAC
TAAAAACGGACTTTTTAAATCCCCATGGGGAATTACAATCTCCCAAACGT
CTCGTGAAATTATTGTGGCTGATACTGACAATCACAGAATACAAATTTTC
AGTGCCGAGGGAAAATTTATCATGAAATTTGGTTCCCAAGGGGATCGCGC
AGGACAATTTAATTCCCCATGTTATGTGGCAGTCAACCCGGATAAAGAAC
ATATTCTAGTGTCAGATTCGAAAAACCACAGGATTCAAATATTCGACAAA
CGTGGGAAATTCATCCAACTTTTTGGAGTACAAGGACAATTAGATGGACA
ATTCAATCACCCGCGTGGTTTATCTATGGATATTGCAAATAACATTATTG
TGTCTGACATGGGAAATCATAGACTCCAAGTGTTGACTTACTCAGGGAAA
ATGATTAAGTGTATTGGTTCTGAGGGGAATGGGGATGGTCAACTCTCCTT
CCCCGAGAGTGTTTCCGTCACACAGAATGGATATATCATTGTGTCAGACC
TCAGCAATAACCGAATACAAGTCTTCTAA Coding sequence (CDS) from alignment at sc0000007_pilon:943057..945735+ >XLOC_042522 ID=XLOC_042522|Name=XLOC_042522|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4524bp|location=Sequence derived from alignment at sc0000007_pilon:943057..945735+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTTCCACCTATGATGTAATGTCTTCAGAAGTTATCGAAAACATTTA
CGAACAACTAATATGTCCCGTCTGTCTGGACCCTTTCAAAGAACCTAAAT
TCCTGAAATGTCTTCACACTTTCTGCAATCATTGCATTCATGAGATCGTT
AATCAGGAACCGAGGGACGTCATTATTTGTCCGACATGTCGTGTAGAAAC
GCCGATCCCTGAGACGGGACTAGATGCTTTGAAGAAGAATTTCTTCGCAA
ACAGTATGCTGGACTTGGTTGCCTACCAGTACGAAGaaattaagaaagaa
aaacaaaaattgagcGATTGTGATCAGTGTGCCGATAAAGATAATGTCAG
CTCCAGATGGCTTCCACCTATGATGTAATGTCTTCAGAAGTTATCGAAAA
CATTTACGAACAACTAATATGTCCCGTCTGTCTGGACCCTTTCAAAGAAC
CTAAATTCCTGAAATGTCTTCACACTTTCTGCAATCATTGCATTCATGAG
ATCGTTAATCAGGAACCGAGGGACGTCATTATTTGTCCGACATGTCGTGT
AGAAACGCCGATCCCTGAGACGGGACTAGATGCTTTGAAGAAGAATTTCT
TCGCAAACAGTATGCTGGACTTGGTTGCCTACCAGTACGAAGaaattaag
aaagaaaaacaaaaattgagcGATTGTGATCAGTGTGCCGATAAAGATAA
TGTCAGCTCCAGGTGTTTGGAGTGTGACCTTCCACTATGCAGCATTTGCG
TGGCCGATCATCGGCGAGGACATACCACGATGGATCATCGCATTGTCTCC
ACGTCTGATGAAGACTTCCATGCCGATAAGAACTCGTCCGATCTATACAC
GCTGACGTTCTGTAAGTACCATACAAGAAACGTCATCAAGTATTTCTGTA
ATACGTGTGACGAAACCGTTTGCCGTGTATGTACCATTCTCGAACATCGT
GAGCACCAGTTTGTGTACCCCAAAGAAGCCATACCTCAACAACGACCGAT
TATCCAAGAATTGCTCACACAAACGAAACAACATATCCCTGTTTTGAGAC
ACACCTTGAAAGACATCTCTAACATGCAGGAAGTTTTGGTGGACTGTAAA
ACTACATTATTGGAAGAAATCAACACCAAGACACAACAAAAAATTGAAGA
GCTTCTTGGTTGTAAAGAGGACCTTATCGCTGACTTGGACAAAATATaca
actccaaacaaaaaacattaagtCTTCAAAAAGATTCGATTGAGTTAGAA
CTCGGGAAATTGGTGGGTTCGTGTGATTTTGCACAGAATATTATTCAGGT
TGGTAACGATGTTGAGATTCTAAGAATCAAATCTCGATTGCAGCAACTCA
ATAAATTGGACATTAACTTAGATCCCGAGGAAGATGATTCCATCCAGTAT
TTGAAGGACGAATCACCTGAATTCCCTCTAGGATGTATTGCTGCAACTCA
AACGTTTGCTTCACTTTCTTACGCGCAAGGTGAAGCTTTCGAGACCGCCA
GAGCTGGTAGCGAGACCAGTATTGTGGTGGTGGCGCAAACCAGGCACGGT
CAGAAGAACATTGGTCAAGATAAAGTGGAAGCACATCTAGTGGCTCCTGA
TCAAACGAAGAAATCGATTGAAGCAACCGATAACAGTGTTTGGAGTGTGA
CCTTCCACTATGCAGCATTTGCGTGGCCGATCATCGGCGAGGACATACCA
CGATGGATCATCGCATTGTCTCCACGTCTGATGAAGACTTCCATGCCGAT
AAGAACTCGTCCGATCTATACACGCTGACGTTCTGTAAGTACCATACAAG
AAACGTCATCAAGTATTTCTGTAATACGTGTGACGAAACCGTTTGCCGTG
TATGTACCATTCTCGAACATCGTGAGCACCAGTTTGTGTACCCCAAAGAA
GCCATACCTCAACAACGACCGATTATCCAAGAATTGCTCACACAAACGAA
ACAACATATCCCTGTTTTGAGACACACCTTGAAAGACATCTCTAACATGC
AGGAAGTTTTGGTGGACTGTAAAACTACATTATTGGAAGAAATCAACACC
AAGACACAACAAAAAATTGAAGAGCTTCTTGGTTGTAAAGAGGACCTTAT
CGCTGACTTGGACAAAATATacaactccaaacaaaaaacattaagtCTTC
AAAAAGATTCGATTGAGTTAGAACTCGGGAAATTGGTGGGTTCGTGTGAT
TTTGCACAGAATATTATTCAGGTTGGTAACGATGTTGAGATTCTAAGAAT
CAAATCTCGATTGCAGCAACTCAATAAATTGGACATTAACTTAGATCCCG
AGGAAGATGATTCCATCCAGTATTTGAAGGACGAATCACCTGAATTCCCT
CTAGGATGTATTGCTGCAACTCAAACGTTTGCTTCACTTTCTTACGCGCA
AGGTGAAGCTTTCGAGACCGCCAGAGCTGGTAGCGAGACCAGTATTGTGG
TGGTGGCGCAAACCAGGCACGGTCAGAAGAACATTGGTCAAGATAAAGTG
GAAGCACATCTAGTGGCTCCTGATCAAACGAAGAAATCGATTGAAGCAAC
CGATAACAATGATGGCACGTATTCCATCCGCTTCACACCTGATATTAGTG
GGAAACACATGCTGGAAGTCACCATCAAAGAAAAACCGATTCGGGGAAGC
CCTTTTCCAATCATCGTCACTAATCGACGAGAATACAATGAAGTCGGGTT
ATCTTTATTCAAGTTCGGGCAATACGGGTCTAAAAAGCGAGAATTCAAAT
CTCCTTTCGGTGTTGCGAGTGACTCAGAGGGCTTCATGTTTGTTGCAGAT
AGTTATAACCACAGGATTCAAACCTTCGGACCAAGAGGGGAATTTATTAA
CATGTTCGGGTCCCATGGGGAGAGAAAAGGGGAATTCAACTGCCCTACAG
ACGTCGCAGTTTCCCCTAACAATCGGATTGCTGTTTGTGATAACGGAAAC
AACCGAGTGCAAGTGTTTTCAAAACGCGGAAGTTTTATCGCTAAATTCGG
TCGTGAAGGAACTAAAAACGGACTTTTTAAATCCCCATGGGGAATTACAA
TCTCCCAAACGTCTCGTGAAATTATTGTGGCTGATACTGACAATCACAGA
ATACAAATTTTCAGTGCCGAGGGAAAATTTATCATGAAATTTGGTTCCCA
AGGGGATCGCGCAGGACAATTTAATTCCCCATGTTATGTGGCAGTCAACC
CGGATAAAGAACATATTCTAGTGTCAGATTCGAAAAACCACAGGATTCAA
ATATTCGACAAACGTGGGAAATTCATCCAACTTTTTGGAGTACAAGGACA
ATTAGATGGACAATTCAATCACCCGCGTGGTTTATCTATGGATATTGCAA
ATAACATTATTGTGTCTGACATGGGAAATCATAGACTCCAAGTGTTGACT
TACTCAGGGAAAATGATTAAGTGTATTGGTTCTGAGGGGAATGGGGATGG
TCAACTCTCCTTCCCCGAGAGTGTTTCCGTCACACAGAATGGATATATCA
TTGTGTCAGACCTCAGCAATAACCGAATACAAGTCTTCTAAATGATGGCA
CGTATTCCATCCGCTTCACACCTGATATTAGTGGGAAACACATGCTGGAA
GTCACCATCAAAGAAAAACCGATTCGGGGAAGCCCTTTTCCAATCATCGT
CACTAATCGACGAGAATACAATGAAGTCGGGTTATCTTTATTCAAGTTCG
GGCAATACGGGTCTAAAAAGCGAGAATTCAAATCTCCTTTCGGTGTTGCG
AGTGACTCAGAGGGCTTCATGTTTGTTGCAGATAGTTATAACCACAGGAT
TCAAACCTTCGGACCAAGAGGGGAATTTATTAACATGTTCGGGTCCCATG
GGGAGAGAAAAGGGGAATTCAACTGCCCTACAGACGTCGCAGTTTCCCCT
AACAATCGGATTGCTGTTTGTGATAACGGAAACAACCGAGTGCAAGTGTT
TTCAAAACGCGGAAGTTTTATCGCTAAATTCGGTCGTGAAGGAACTAAAA
ACGGACTTTTTAAATCCCCATGGGGAATTACAATCTCCCAAACGTCTCGT
GAAATTATTGTGGCTGATACTGACAATCACAGAATACAAATTTTCAGTGC
CGAGGGAAAATTTATCATGAAATTTGGTTCCCAAGGGGATCGCGCAGGAC
AATTTAATTCCCCATGTTATGTGGCAGTCAACCCGGATAAAGAACATATT
CTAGTGTCAGATTCGAAAAACCACAGGATTCAAATATTCGACAAACGTGG
GAAATTCATCCAACTTTTTGGAGTACAAGGACAATTAGATGGACAATTCA
ATCACCCGCGTGGTTTATCTATGGATATTGCAAATAACATTATTGTGTCT
GACATGGGAAATCATAGACTCCAAGTGTTGACTTACTCAGGGAAAATGAT
TAAGTGTATTGGTTCTGAGGGGAATGGGGATGGTCAACTCTCCTTCCCCG
AGAGTGTTTCCGTCACACAGAATGGATATATCATTGTGTCAGACCTCAGC
AATAACCGAATACAAGTCTTCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:943057..945735 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1282-2262:1699 |
| Aaloc | 358-1278:536 |
| Aaloc | 1-354:1 |
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