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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000211_pilon:289891..291657- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042499 ID=XLOC_042499|Name=XLOC_042499|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1767bp|location=Sequence derived from alignment at sc0000211_pilon:289891..291657- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTCTATTATCTTCATCATCATTTTCAATTCAATCGTTGGATTTATCAG
CGCATCCGATCAATCAAAACCCCTCAACAATTCAATAATTAAAACTCACA
ACCATCAAAATAATAATTCTCAACCCATTGGAGCGTCCAAACTTGATGAC
CCAACTTTACCTGAAGCGTCTAACCTCGATAGTCCAACTTTAAATGGAGC
GTCTAAACTCGATAATCTAACTTTAAATGGAGTGTCTAAACTCGATAATC
CAACTTTAGATGAAACCTCTAGACTCGATGAACCAGCTTTATCTGAAACA
TCCAAACTCGATGATCCAACCTTACCTAACCTAAACAAGTTTTCTTTAAA
CAAAACAATGCTAGATAGAATCTGCAACGGTCAAAATAACACAACGAGAA
ATAATGAAACTGGCAGACAAATAAGTATAGACCGGGCGCACCAAGCGATA
TCACCTAACAATTATGGTACTCTAAATAGCTCTGACTCAGACGCCGAAGA
TTTAGTCAATTACACAAGCCTAAAAGATGACAATGAGTATAATACCAATG
CATCAAAAATACTCCCAAACAGTAGCATATGTATACATCACCGACGCCGA
CAACATCGGCAAAGAAGAATACCAAGTGTCTTTATTATTATAATCATTAT
CATAGAAATCGTAATCTTCATCATCGGAGTCACAGGGAACATCATGATCG
TGCTTACAATCCTTACAACAAAATCAATGCATTCAACACAGAACTTCTTC
GTCTTCAACTTAGCCATAACCGATCTTGTCACACTCGTTAATCTACCAAT
GAAAATCTGGCAGCAATTAGCACCATACCTGTTATTACCAGGATGGCCTT
TTGGTGAATTTTCATGCATTTATGTTGTTCCTATCTTCGATATTTTTCCA
TCTGTATCGATCTTAACTCTTGTGGCAATCTATATCGACCGATACCGAGC
AATAACGGCAACGTTGGCAACAGCAGTAAGTCTAAAATATATTATCCTAC
TTTTAGCTGCGAACTGGATCGGCAATTATCTAGTCGTCGGACTTCCTGTG
ACTTTTGTCATGACGTATATCGCTCCATCACAGTGCATGGCTAATTTCAC
ATCGGCATCGTTAAGACGTACGTATTTCACTTTACGGACAGTGTTACTAT
ACGTGTTACCGTCAAGCATCATATTTTTTTGTTTCGTGCGTGTGAACAAG
GTGTTAGGAAACAGCATGCGTTTCCTGCAACGCTCAGTAACAGGGAAATC
ACAAGTGGTCAGACTTAAAAGACAAAAAAGAGTAATGACTATGTTTTTCG
TCATCTTCCTAACATTCGTAATTTGTTATTTCCCGTATAATACACTGACA
ATAGTATACCATTATGTTCCATCTTTAGGACAATATCCTGAACTTATTAC
AAGTTTTATGCACGTGGCTGCCATGTTAGGGATAGCTTACAGCGCATGTA
ATTCTGTCATTTTATATCATCTAAGTAAAGCTTTCAGAGTGAAATTCCAG
AAATATTTACCATTCTTGAAATGTTTTACACGTTTGGAGAAAGAAGACAC
GATTGATAATCACGATCGCAGACATACCACTATTGAGGATTTGGATGACG
GTGAAGAAACAAAAACTAATCGTCGATTTTCAGGAGCTAATTTATTCTCA
AGTAAAGGGGGTACTTTCAAGCGACGTTTTGGCCCTAAGAGGCCGCATCA
CCCGAACGGTGAGACTCAAGAGCATGAACTGTTAGAAAATAACAATATAA
CAAACCATGATTTATGA Coding sequence (CDS) from alignment at sc0000211_pilon:289891..291657- >XLOC_042499 ID=XLOC_042499|Name=XLOC_042499|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3534bp|location=Sequence derived from alignment at sc0000211_pilon:289891..291657- (Clytia hemisphaerica_ch_hm2_pilon)
AGGTCTATTATCTTCATCATCATTTTCAATTCAATCGTTGGATTTATCAG
CGCATCCGATCAATCAAAACCCCTCAACAATTCAATAATTAAAACTCACA
ACCATCAAAATAATAATTCTCAACCCATTGGAGCGTCCAAACTTGATGAC
CCAACTTTACCTGAAGCGTCTAACCTCGATAGTCCAACTTTAAATGGAGC
GTCTAAACTCGATAATCTAACTTTAAATGGAGTGTCTAAACTCGATAATC
CAACTTTAGATGAAACCTCTAGACTCGATGAACCAGCTTTATCTGAAACA
TCCAAACTCGATGATCCAACCTTACCTAACCTAAACAAGTTTTCTTTAAA
CAAAACAATGCTAGATAGAATCTGCAACGGTCAAAATAACACAACGAGAA
ATAATGAAACTGGCAGACAAATAAGTATAGACCGGGCGCACCAAGCGATA
TCACCTAACAATTATGGTACTCTAAATAGCTCTGACTCAGACGCCGAAGA
TTTAGTCAATTACACAAGCCTAAAAGATGACAATGAGTATAATACCAATG
CATCAAAAATACTCCCAAACAGTAGCATATGTATACATCACCGACGCCGA
CAACATCGGCAAAGAAGAATACCAAGTGTCTTTATTATTATAATCATTAT
CATAGAAATCGTAATCTTCATCATCGGAGTCACAGGGAACATCATGATCG
TGCTTACAATCCTTACAACAAAATCAATGCATTCAACACAGAACTTCTTC
GTCTTCAACTTAGCCATAACCGATCTTGTCACACTCGTTAATCTACCAAT
GAAAATCTGGCAGCAATTAGCACCATACCTGTTATTACCAGGATGGCCTT
TTGGTGAATTTTCATGCATTTATGTTGTTCCTATCTTCGATATTTTTCCA
TCTGTATCGATCTTAACTCTTGTGGCAATCTATATCGACCGATACCGAGC
AATAACGGCAACGTTGGCAACAGCAGTAAGTCTAAAATATATTATCCTAC
TTTTAGCTGCGAACTGGATCGGCAATTATCTAGTCGTCGGACTTCCTGTG
ACTTTTGTCATGACGTATATCGCTCCATCACAGTGCATGGCTAATTTCAC
ATCGGCATCGTTAAGACGTACGTATTTCACTTTACGGACAGTGTTACTAT
ACGTGTTACCGTCAAGCATCATATTTTTTTGTTTCGTGCGTGTGAACAAG
GTGTTAGGAAACAGCATGCGTTTCCTGCAACGCTCAGTAACAGGGAAATC
ACAAGTGGTCAGACTTAAAAGACAAAAAAGAGTAATGACTATGTTTTTCG
TCATCTTCCTAACATTCGTAATTTGTTATTTCCCGTATAATACACTGACA
ATAGTATACCATTATGTTCCATCTTTAGGACAATATCCTGAACTTATTAC
AAGTTTTATGCACGTGGCTGCCATGTTAGGGATAGCTTACAGCGCATGTA
ATTCTGTCATTTTATATCATCTAAGTAAAGCTTTCAGAGTGAAATTCCAG
AAATATTTACCATTCTTGAAATGTTTTACACGTTTGGAGAAAGAAGACAC
GATTGATAATCACGATCGCAGACATACCACTATTGAGGATTTGGATGACG
GTGAAGAAACAAAAACTAATCGTCGATTTTCAGGAGCTAATTTATTCTCA
AGTAAAGGGGGTACTTTCAAGCGACGTTTTGGCCCTAAGAGGCCGCATCA
CCCGAACGGTGAGACTCAAGAGCATGAACTGTTAGAAAATAACAATATAA
CAAACCATGATTTATGAAGGTCTATTATCTTCATCATCATTTTCAATTCA
ATCGTTGGATTTATCAGCGCATCCGATCAATCAAAACCCCTCAACAATTC
AATAATTAAAACTCACAACCATCAAAATAATAATTCTCAACCCATTGGAG
CGTCCAAACTTGATGACCCAACTTTACCTGAAGCGTCTAACCTCGATAGT
CCAACTTTAAATGGAGCGTCTAAACTCGATAATCTAACTTTAAATGGAGT
GTCTAAACTCGATAATCCAACTTTAGATGAAACCTCTAGACTCGATGAAC
CAGCTTTATCTGAAACATCCAAACTCGATGATCCAACCTTACCTAACCTA
AACAAGTTTTCTTTAAACAAAACAATGCTAGATAGAATCTGCAACGGTCA
AAATAACACAACGAGAAATAATGAAACTGGCAGACAAATAAGTATAGACC
GGGCGCACCAAGCGATATCACCTAACAATTATGGTACTCTAAATAGCTCT
GACTCAGACGCCGAAGATTTAGTCAATTACACAAGCCTAAAAGATGACAA
TGAGTATAATACCAATGCATCAAAAATACTCCCAAACAGTAGCATATGTA
TACATCACCGACGCCGACAACATCGGCAAAGAAGAATACCAAGTGTCTTT
ATTATTATAATCATTATCATAGAAATCGTAATCTTCATCATCGGAGTCAC
AGGGAACATCATGATCGTGCTTACAATCCTTACAACAAAATCAATGCATT
CAACACAGAACTTCTTCGTCTTCAACTTAGCCATAACCGATCTTGTCACA
CTCGTTAATCTACCAATGAAAATCTGGCAGCAATTAGCACCATACCTGTT
ATTACCAGGATGGCCTTTTGGTGAATTTTCATGCATTTATGTTGTTCCTA
TCTTCGATATTTTTCCATCTGTATCGATCTTAACTCTTGTGGCAATCTAT
ATCGACCGATACCGAGCAATAACGGCAACGTTGGCAACAGCAGTAAGTCT
AAAATATATTATCCTACTTTTAGCTGCGAACTGGATCGGCAATTATCTAG
TCGTCGGACTTCCTGTGACTTTTGTCATGACGTATATCGCTCCATCACAG
TGCATGGCTAATTTCACATCGGCATCGTTAAGACGTACGTATTTCACTTT
ACGGACAGTGTTACTATACGTGTTACCGTCAAGCATCATATTTTTTTGTT
TCGTGCGTGTGAACAAGGTGTTAGGAAACAGCATGCGTTTCCTGCAACGC
TCAGTAACAGGGAAATCACAAGTGGTCAGACTTAAAAGACAAAAAAGAGT
AATGACTATGTTTTTCGTCATCTTCCTAACATTCGTAATTTGTTATTTCC
CGTATAATACACTGACAATAGTATACCATTATGTTCCATCTTTAGGACAA
TATCCTGAACTTATTACAAGTTTTATGCACGTGGCTGCCATGTTAGGGAT
AGCTTACAGCGCATGTAATTCTGTCATTTTATATCATCTAAGTAAAGCTT
TCAGAGTGAAATTCCAGAAATATTTACCATTCTTGAAATGTTTTACACGT
TTGGAGAAAGAAGACACGATTGATAATCACGATCGCAGACATACCACTAT
TGAGGATTTGGATGACGGTGAAGAAACAAAAACTAATCGTCGATTTTCAG
GAGCTAATTTATTCTCAAGTAAAGGGGGTACTTTCAAGCGACGTTTTGGC
CCTAAGAGGCCGCATCACCCGAACGGTGAGACTCAAGAGCATGAACTGTT
AGAAAATAACAATATAACAAACCATGATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000211_pilon | genome | sc0000211_pilon:289891..291657 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1767:1768 |
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