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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000211_pilon:351784..353310+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042477 ID=XLOC_042477|Name=XLOC_042477|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1527bp|location=Sequence derived from alignment at sc0000211_pilon:351784..353310+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAAAAGACCCGTTGTTTGTTACTAGACGAAATAATGGCTTACGCTGG
TAGCTTTCATATTCGCATATGGCAACTGATTTGGTATTGCGCCATTTGTT
TGTTTGGTACTCTTGGTAACAGTCTCATTATCTACTTAGCAACGGTCGCT
AAGAAGGGTGGCATTGATCGGAAAGCGCCCTTTAATATATATCTAGTCGC
CCTAGCGGTGACTGACTTCCTGGTTTGTCTATCCTCTCTACCAACCTACA
TCTTATCAACGAATATATTTTATCATCCGTCAAACGAAGGTGGACAATGG
ATGTGTAAATTACTGACTGGTTATTTTATACCATTTTGGTTTATGGATGT
ATCAGTGTTTCTACTAGCAGCTTTGGCGATTGAAAGATGGAGAGTCATTG
TGAAGCCTTATGCGAAATTACGCAGACCAAGGTTGAGATCAACTCTTATG
GTTATCACTATGGTAACGTTATTGGGAATCATAGCACAAGCTCCTATTCT
GTATGCTGCCCATTATGTTGGTTCAGAAATGGCTGATATAGGTAATTAAG
ATAACTTCATCGGTGTTTTATCAGTTTAACAATTTTCGCTCTTTTGAAAC
CCAAATAACTTCTATAAAGATAACTATCAACTATTTTAGTTCTTTCCTGG
GTATTCCTAAAAGATAGGGTACCCTAATTGGGGTATGTTCtcacgaattt
cagcctaaatgttcctATAAACTGGTTTCTCATAAATCTTCTGTATCAAT
TTTCCAGGTAATGTCTGTTCATACACCCATCAAGACCTCGCCAGTAAACT
TCTTCATTATAACCAATTGCTATTGGAAACAATCATTCCAACGTTAATCT
TCTTTGTTTGCTTCTACCAAATGTACAAGACTTTATCCAAAAGAAAGCAG
ACCCTTCGAACGCAGCTTACAGCCTACCAGCAGACTAGCATTTCCACAGA
GAAGCAACCAACATCAAGtaataacaatgaaaaaaagattgaacACAAAA
ACGGTCTACAAAGGCAAAAGAGTTTGAAAATCCATTCTTCAGGATTACAA
GAGAAAATCAACATGCAGTGTAGCTCTCTTAAGAGATTTGTAAAAGGTCA
ACAGCCTACAGTCTCGCCTCTGCAACAGCAAGCGCACGCTCTAAAACGTA
CAAAGCAGACTATAAACAGTATGTTACTTGTGGTTGTTTCATTCATAGTC
TGTGTTTTCATCAACGAAATCCTGTTCTTGCTAACCAAGCAAGTTCTTAA
TATCACAAACTTGCAATGGAATTCAGAAATTTATCAAATCAGTGTCATGT
TACGTTTCACGAATTCGTGCATCAATCCCCTTATCTATggtttgaaatcg
aaagtgtttaGAGATCGGCTGAAAGAGATTTTACGCTTGTCTAGAAAACC
ACGTGGGCTTAGTGAGACACGCTTTGAGGAAGCTCTGAAGCATGGCAGAT
CTCTATCAGTCTTTTATGTTTCGTCAAGTTCGGTGAAGGACGGTTTGGAG
GAgacaaaatttaactttttaaaaaat Coding sequence (CDS) from alignment at sc0000211_pilon:351784..353310+ >XLOC_042477 ID=XLOC_042477|Name=XLOC_042477|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2622bp|location=Sequence derived from alignment at sc0000211_pilon:351784..353310+ (Clytia hemisphaerica_ch_hm2_pilon)
ATAAAAAAGACCCGTTGTTTGTTACTAGACGAAATAATGGCTTACGCTGG
TAGCTTTCATATTCGCATATGGCAACTGATTTGGTATTGCGCCATTTGTT
TGTTTGGTACTCTTGGTAACAGTCTCATTATCTACTTAGCAACGGTCGCT
AAGAAGGGTGGCATTGATCGGAAAGCGCCCTTTAATATATATCTAGTCGC
CCTAGCGGTGACTGACTTCCTGGTTTGTCTATCCTCTCTACCAACCTACA
TCTTATCAACGAATATATTTTATCATCCGTCAAACGAAGGTGGACAATGG
ATGTGTAAATTACTGACTGGTTATTTTATACCATTTTGGTTTATGGATGT
ATCAGTGTTTCTACTAGCAGCTTTGGCGATTGAAAGATGGAGAGTCATTG
TGAAGCCTTATGCGAAATTACGCAGACCAAGGTTGAGATCAACTCTTATG
GTTATCACTATGGTAACGTTATTGGGAATCATAGCACAAGCTCCTATTCT
GTATGCTGCCCATTATGTTGGTTCAGAAATGGCTGATATAGATAAAAAAG
ACCCGTTGTTTGTTACTAGACGAAATAATGGCTTACGCTGGTAGCTTTCA
TATTCGCATATGGCAACTGATTTGGTATTGCGCCATTTGTTTGTTTGGTA
CTCTTGGTAACAGTCTCATTATCTACTTAGCAACGGTCGCTAAGAAGGGT
GGCATTGATCGGAAAGCGCCCTTTAATATATATCTAGTCGCCCTAGCGGT
GACTGACTTCCTGGTTTGTCTATCCTCTCTACCAACCTACATCTTATCAA
CGAATATATTTTATCATCCGTCAAACGAAGGTGGACAATGGATGTGTAAA
TTACTGACTGGTTATTTTATACCATTTTGGTTTATGGATGTATCAGTGTT
TCTACTAGCAGCTTTGGCGATTGAAAGATGGAGAGTCATTGTGAAGCCTT
ATGCGAAATTACGCAGACCAAGGTTGAGATCAACTCTTATGGTTATCACT
ATGGTAACGTTATTGGGAATCATAGCACAAGCTCCTATTCTGTATGCTGC
CCATTATGTTGGTTCAGAAATGGCTGATATAGGTAATGTCTGTTCATACA
CCCATCAAGACCTCGCCAGTAAACTTCTTCATTATAACCAATTGCTATTG
GAAACAATCATTCCAACGTTAATCTTCTTTGTTTGCTTCTACCAAATGTA
CAAGACTTTATCCAAAAGAAAGCAGACCCTTCGAACGCAGCTTACAGCCT
ACCAGCAGACTAGCATTTCCACAGAGAAGCAACCAACATCAAGtaataac
aatgaaaaaaagattgaacACAAAAACGGTCTACAAAGGCAAAAGAGTTT
GAAAATCCATTCTTCAGGATTACAAGAGAAAATCAACATGCAGTGTAGCT
CTCTTAAGAGATTTGTAAAAGGTCAACAGCCTACAGTCTCGCCTCTGCAA
CAGCAAGCGCACGCTCTAAAACGTACAAAGCAGACTATAAACAGTATGTT
ACTTGTGGTTGTTTCATTCATAGTCTGTGTTTTCATCAACGAAATCCTGT
TCTTGCTAACCAAGCAAGTTCTTAATATCACAAACTTGCAATGGAATTCA
GAAATTTATCAAATCAGTGTCATGTTACGTTTCACGAATTCGTGCATCAA
TCCCCTTATCTATggtttgaaatcgaaagtgtttaGAGATCGGCTGAAAG
AGATTTTACGCTTGTCTAGAAAACCACGTGGGCTTAGTGAGACACGCTTT
GAGGAAGCTCTGAAGCATGGCAGATCTCTATCAGTCTTTTATGTTTCGTC
AAGTTCGGTGAAGGACGGTTTGGAGGAgacaaaatttaactttttaaaaa
atGTAATGTCTGTTCATACACCCATCAAGACCTCGCCAGTAAACTTCTTC
ATTATAACCAATTGCTATTGGAAACAATCATTCCAACGTTAATCTTCTTT
GTTTGCTTCTACCAAATGTACAAGACTTTATCCAAAAGAAAGCAGACCCT
TCGAACGCAGCTTACAGCCTACCAGCAGACTAGCATTTCCACAGAGAAGC
AACCAACATCAAGtaataacaatgaaaaaaagattgaacACAAAAACGGT
CTACAAAGGCAAAAGAGTTTGAAAATCCATTCTTCAGGATTACAAGAGAA
AATCAACATGCAGTGTAGCTCTCTTAAGAGATTTGTAAAAGGTCAACAGC
CTACAGTCTCGCCTCTGCAACAGCAAGCGCACGCTCTAAAACGTACAAAG
CAGACTATAAACAGTATGTTACTTGTGGTTGTTTCATTCATAGTCTGTGT
TTTCATCAACGAAATCCTGTTCTTGCTAACCAAGCAAGTTCTTAATATCA
CAAACTTGCAATGGAATTCAGAAATTTATCAAATCAGTGTCATGTTACGT
TTCACGAATTCGTGCATCAATCCCCTTATCTATggtttgaaatcgaaagt
gtttaGAGATCGGCTGAAAGAGATTTTACGCTTGTCTAGAAAACCACGTG
GGCTTAGTGAGACACGCTTTGAGGAAGCTCTGAAGCATGGCAGATCTCTA
TCAGTCTTTTATGTTTCGTCAAGTTCGGTGAAGGACGGTTTGGAGGAgac
aaaatttaactttttaaaaaat
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000211_pilon | genome | sc0000211_pilon:351784..353310 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 544-1311:760 |
| Aaloc | 1-540:1 |
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