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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000289_pilon:264401..266310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042458 ID=XLOC_042458|Name=XLOC_042458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1910bp|location=Sequence derived from alignment at sc0000289_pilon:264401..266310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCTGCAAATTTTGAAAAAGAAACAACTTTTTCTACTTTTCAAGA
GCTTTTTGAATTAGATGAACGTTTTCGAAAAGCATTACATGCTGGCCTTC
AAAAATTTTTATGGAATGGAACTGCCACAAAGAATCATCCAAATGCAAAG
AAGAATATTCAGCTTGCTGGCAGTGCTATAGAGGGTGCAACTTTGGCAAG
AGTTTTTCAAAAGAATGATGAGTTTCCAAGTGGTTTGAATCAAGAAATTG
AAGTGGATATCGAATATTGTCTCTTTCAGGTATAAACTTGCATATTTTTA
ATTATTTTAAAAGCTCTTTAAATGTCTAATTTCACTACTTGCTTTCATTT
ATTAATTCTTTCTATTTCAATCTTCCATCTTCCCTCCTAGCGGTTTGCGT
GAATGCATGAATGGGCATTTTCTTCCATATATTATAAAAAGCAAACAAAT
TACCATAAATAACATTATTTTAAAGTATTTTTTAGTTCTTTATAAGGATT
CATTCCAAGTGTTCACAATATATTGAAAATTATAAATACAACTAAATTAC
TAGCACTATTTTCAATATTTTAATAATATGAAGGGTAGATGTGGCACTTA
GAATTTTTGGAAAATAATTTTATAAATAAACCTTTGAAAATTAGTTAACT
ATGTTTATTTTGCAAATTTTTGTTTAGATACCAGAGGATAAGAAGCATTT
GGTAAAAGAAATCGATTCTGAACAGGGCTTTGTTCAAATTGAGTTTACAA
AAGATCTAATCAATGATAGCATATCAATTGGCTGGAATGTTGACAAAGAA
GATTTTGAAGAATATTATGGAGAATTAATTTCACTCGGTGGATTTTTAAA
GCCATTTAGAGCGAAACAAATTGCTCAACAGAAAGTAGCATTTCAAGATG
TCGACAACGAATACCCTTTGCTTTTTGGTGCAATGTTTGGTGTTCCGAAA
TGTGATATTAAAGTTGAGAATCTCGCTTGCGAAGTCACCAAATCCTCTGT
CGCGTCCGAAATCCTTGTTAAGGTAAAAGAGGAACCAAAGCTCAAAATTT
CTTTTGATACTGTCATTATTGTGAAATTGGCCTGGCAGTCTCAAATTGCC
AAGGACTGGTTGAGGAGACCAAAAAACTGGCCATCATACGCTATTTGTGA
GCAACTCATGAAATCTGGAAGTTATGTTATTCCCAAACCGTCAAAGAAAA
ACAAGCTACATCTGGATACCACTGAAATGCGTTATGCTTTCTCTCAAACA
GAGCGCGAACTTGTTAAATTACGCAGTCAGAATCAAAATTTTGTTTACAT
GGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTGATACAGAAG
AAATCAGTTCTTTCATTGCCAAGACTGCAATGTTTTGGATTGCTGAGGAA
TTTCCACCTGGAGATTCTGTTTGGGATGTTTTTGATGAAGATTCCTTACT
TTTACCATTGCAAATTTTATTTTCATGGTTGTTGAGTACCTTTGAGAGTG
GTTTCGTTCCATATTATTTTAATGTGAAGATCAATATCATTGCTGGAGTA
TCAGGAATGACCAAGGAGTTAGTTATCACCAAAATGGAGGAAATTTTGAA
TGATATGAGACAGTTCTTACTATCAGACATGCATCAAGAACTTGAACTCT
GCAAAGATGTTACGATCAAGGTAGACAATTTTGGTCAAATATTTACAATG
ATAAAAAACAAAGACTACATAAGTCTTTTACAACATCTTCCACCCGAATT
GTGTTTGGACGCCCTTAAACATTTCAATGAAAATCCTAGAAAATATGAAA
GATATACTGCTGCAACAGAAGAAAATGATAAAGAAAGTTTTAATGAAAAT
GTAAATGTTGTTGTTGAAAATGAAAACTGCTCCACAACTCAAGAAATTGA
ATATGAAGTA Coding sequence (CDS) from alignment at sc0000289_pilon:264401..266310- >XLOC_042458 ID=XLOC_042458|Name=XLOC_042458|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3024bp|location=Sequence derived from alignment at sc0000289_pilon:264401..266310- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAGCTGCAAATTTTGAAAAAGAAACAACTTTTTCTACTTTTCAAGA
GCTTTTTGAATTAGATGAACGTTTTCGAAAAGCATTACATGCTGGCCTTC
AAAAATTTTTATGGAATGGAACTGCCACAAAGAATCATCCAAATGCAAAG
AAGAATATTCAGCTTGCTGGCAGTGCTATAGAGGGTGCAACTTTGGCAAG
AGTTTTTCAAAAGAATGATGAGTTTCCAAGTGGTTTGAATCAAGAAATTG
AAGTGGATATCGAATATTGTCTCTTTCAGATGGCAGCTGCAAATTTTGAA
AAAGAAACAACTTTTTCTACTTTTCAAGAGCTTTTTGAATTAGATGAACG
TTTTCGAAAAGCATTACATGCTGGCCTTCAAAAATTTTTATGGAATGGAA
CTGCCACAAAGAATCATCCAAATGCAAAGAAGAATATTCAGCTTGCTGGC
AGTGCTATAGAGGGTGCAACTTTGGCAAGAGTTTTTCAAAAGAATGATGA
GTTTCCAAGTGGTTTGAATCAAGAAATTGAAGTGGATATCGAATATTGTC
TCTTTCAGATACCAGAGGATAAGAAGCATTTGGTAAAAGAAATCGATTCT
GAACAGGGCTTTGTTCAAATTGAGTTTACAAAAGATCTAATCAATGATAG
CATATCAATTGGCTGGAATGTTGACAAAGAAGATTTTGAAGAATATTATG
GAGAATTAATTTCACTCGGTGGATTTTTAAAGCCATTTAGAGCGAAACAA
ATTGCTCAACAGAAAGTAGCATTTCAAGATGTCGACAACGAATACCCTTT
GCTTTTTGGTGCAATGTTTGGTGTTCCGAAATGTGATATTAAAGTTGAGA
ATCTCGCTTGCGAAGTCACCAAATCCTCTGTCGCGTCCGAAATCCTTGTT
AAGGTAAAAGAGGAACCAAAGCTCAAAATTTCTTTTGATACTGTCATTAT
TGTGAAATTGGCCTGGCAGTCTCAAATTGCCAAGGACTGGTTGAGGAGAC
CAAAAAACTGGCCATCATACGCTATTTGTGAGCAACTCATGAAATCTGGA
AGTTATGTTATTCCCAAACCGTCAAAGAAAAACAAGCTACATCTGGATAC
CACTGAAATGCGTTATGCTTTCTCTCAAACAGAGCGCGAACTTGTTAAAT
TACGCAGTCAGAATCAAAATTTTGTTTACATGGTTTTTAAAATCATGTTT
GTGAAATGGATCAAGCCAATTGATACAGAAGAAATCAGTTCTTTCATTGC
CAAGACTGCAATGTTTTGGATTGCTGAGGAATTTCCACCTGGAGATTCTG
TTTGGGATGTTTTTGATGAAGATTCCTTACTTTTACCATTGCAAATTTTA
TTTTCATGGTTGTTGAGTACCTTTGAGAGTGGTTTCGTTCCATATTATTT
TAATGTGAAGATCAATATCATTGCTGGAGTATCAGGAATGACCAAGGAGT
TAGTTATCACCAAAATGGAGGAAATTTTGAATGATATGAGACAGTTCTTA
CTATCAGACATGCATCAAGAACTTGAACTCTGCAAAGATGTTACGATCAA
GGTAGACAATTTTGGTCAAATATTTACAATGATAAAAAACAAAGACTACA
TAAGTCTTTTACAACATCTTCCACCCGAATTGTGTTTGGACGCCCTTAAA
CATTTCAATGAAAATCCTAGAAAATATGAAAGATATACTGCTGCAACAGA
AGAAAATGATAAAGAAAGTTTTAATGAAAATGTAAATGTTGTTGTTGAAA
ATGAAAACTGCTCCACAACTCAAGAAATTGAATATGAAGTAATACCAGAG
GATAAGAAGCATTTGGTAAAAGAAATCGATTCTGAACAGGGCTTTGTTCA
AATTGAGTTTACAAAAGATCTAATCAATGATAGCATATCAATTGGCTGGA
ATGTTGACAAAGAAGATTTTGAAGAATATTATGGAGAATTAATTTCACTC
GGTGGATTTTTAAAGCCATTTAGAGCGAAACAAATTGCTCAACAGAAAGT
AGCATTTCAAGATGTCGACAACGAATACCCTTTGCTTTTTGGTGCAATGT
TTGGTGTTCCGAAATGTGATATTAAAGTTGAGAATCTCGCTTGCGAAGTC
ACCAAATCCTCTGTCGCGTCCGAAATCCTTGTTAAGGTAAAAGAGGAACC
AAAGCTCAAAATTTCTTTTGATACTGTCATTATTGTGAAATTGGCCTGGC
AGTCTCAAATTGCCAAGGACTGGTTGAGGAGACCAAAAAACTGGCCATCA
TACGCTATTTGTGAGCAACTCATGAAATCTGGAAGTTATGTTATTCCCAA
ACCGTCAAAGAAAAACAAGCTACATCTGGATACCACTGAAATGCGTTATG
CTTTCTCTCAAACAGAGCGCGAACTTGTTAAATTACGCAGTCAGAATCAA
AATTTTGTTTACATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCC
AATTGATACAGAAGAAATCAGTTCTTTCATTGCCAAGACTGCAATGTTTT
GGATTGCTGAGGAATTTCCACCTGGAGATTCTGTTTGGGATGTTTTTGAT
GAAGATTCCTTACTTTTACCATTGCAAATTTTATTTTCATGGTTGTTGAG
TACCTTTGAGAGTGGTTTCGTTCCATATTATTTTAATGTGAAGATCAATA
TCATTGCTGGAGTATCAGGAATGACCAAGGAGTTAGTTATCACCAAAATG
GAGGAAATTTTGAATGATATGAGACAGTTCTTACTATCAGACATGCATCA
AGAACTTGAACTCTGCAAAGATGTTACGATCAAGGTAGACAATTTTGGTC
AAATATTTACAATGATAAAAAACAAAGACTACATAAGTCTTTTACAACAT
CTTCCACCCGAATTGTGTTTGGACGCCCTTAAACATTTCAATGAAAATCC
TAGAAAATATGAAAGATATACTGCTGCAACAGAAGAAAATGATAAAGAAA
GTTTTAATGAAAATGTAAATGTTGTTGTTGAAAATGAAAACTGCTCCACA
ACTCAAGAAATTGAATATGAAGTA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000289_pilon | genome | sc0000289_pilon:264401..266310 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 280-1512:1234 |
| Aaloc | 1-279:1911 |
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