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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000289_pilon:268508..271218- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042457 ID=XLOC_042457|Name=XLOC_042457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2711bp|location=Sequence derived from alignment at sc0000289_pilon:268508..271218- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGA
AGTAAGAAACAAGATGGCTGTGTCAAGTTCTACAAATGATAAAAAATTTG
CTTTGCTGCAAGAATTCTTTAATTTAGATGAGAGATTTCGTGAAACTCTT
CATGCTGGCCTTCAAAAATTTTTATGGAATGGAAGTGTCACAAGGAAACA
CCCAAATGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTG
CATCTTTGGCAAGAGTTTTTCAAAAGAATGATGAGTTTCCAAGTGGTTTG
AACCAAGAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGGTATACTA
ACACATCTTTTTCAATAAACTTTACTTCACTTCATTTCAAGGAGAAATGA
CCATGTGGTTAAAAGTGTAAGCATTACACACCATAGGCTTACAGTTTGAA
TCCCTGCTCCTTCCAATGTGTTGTTCAGTTCATATATAGCCCATTCAGCT
GGCCATTGACCTTGTGAAAACAATCACAAGACAGTCTAAAAGTCCTAGAT
TCCTGGGCTCTCTACGTAAAATATTGACTATATTGATGCAAATCTTCTTA
TTTTTACCTTTTTACTATTTTTTTCAATTTAGAAAAGATTCCATCTCCAT
TTTATAATGCAATGGAATGTATTAACATAGTTCCTCCCTCTCTTTCTTTA
GGGGGTGACACCTTCTGAAAAAATGAAGAAGGAGGGGGATCAGAAATTTG
CATGAAAAAGGCGGAGGATGTAGATTATTTTCAAGCACTGTTACGAAATT
TTGTTTTTTATGAAATGTAGTTTTCTGTTGAGTAGTTTGAGTCAAAAAGA
TGAAAGAAGTTTATTATTTCGCTCGCTCTCTCTCTAAAGATAATTCACAT
ATATACATTTGTTAGCTATCTTAAAATCTTAGGTAATTGACATTTTTAAA
GGTTAGGGTGGATGCCAAGAGGGGGGTCAGACCCCTTTTCGTACTATGAT
TGAAATAAAACTATTGTTTTTAACAATAAAAAGCAACGAAGGGCTACTGG
GTTTTTTATACAAACTAAATGTAAATTAATTAGATTAATGTCAGGATTTT
CGTCAAGTTTAGTTTGAAATAAACATTTTGAATTCATTTTTATTTAAGGA
CCATTTTGATTCTTTTTGTTTTGACGTTTCATATTCTTAAAAAATAAAAA
AACTTAATATACTATGTGTTTGTTTCTAGTTACCAGAATCAAAGCAAGAT
CTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGAAGCTTCA
AGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTTGACCAAT
ATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCTATTTT
CTACCGTTCAAAATCAAATCAATTGCTAAGAAGAAAGTAGCTTATCGTGA
TGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAATGTTAAGA
AGAGAAATGTGGACCTCAAGCCAATTGCTAATGAGATCACAAAATCTTCT
GTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTGAAAGAAAACTTAAAAT
TTCTTTTGATACTGTTGTGGTTGTTGGGCTATCATGGCATTCTCAAATAG
GCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGCTGTCTGT
CAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCAAGAAA
AAATAAGTTTGACCCAAACACTACTGAAATGCGCTATGCATATTCTCAAA
CAGAGCGCAAACTTGTTAAATTACGCAGTCAGAATCAAAATTTTGTGTAC
ATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTGATACAGA
AGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGATTGCTGAGG
AATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGTGAGTGCTTG
GTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGCCTTCAGTAA
AGATACAATGCCGTACTACTTCAATGAAAAGTCCAATATTATTGAGGGGA
TGTCAGATCAAACAAAGCAACTTATCATTACAAACATTGGAGAAGTTTTG
GGGGATTTACAACAATTTATACCCTCAGATATTGACCGAGAGCTTGCTGT
TGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAATTTTAACAT
TGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTACCAAAAGAA
TTGATTTTGGATATTATTGCTTTTTATTTTGCTGAAATTGGCTGGGATGT
CATCCATGAGAAAATTGAGAAAGAACTTGATAGGCTCATAGAGCGGGCTG
AGAAAGAAATTGACCGCAGCTTAAAGAAAGTTGAAAAAGAACTTGACAGG
TTCACAGAGCGAGCTGAGAAAGAAATTGACCGCGGTTCAAAGACAGTTGA
AAATGAACTTGACAGGCTCACAGAGCGAGCTGAGAAAGAAATTGACCGCA
GCTTAAAGAAAGTCGAAAAAGAACTTGACAGGTTCACAGAGCGAGCTGAG
AAAGAAATTGACCGCAGTTCAAAGAAAGTTGAAAATGAGGTTGACCGTGT
TAAAGAAAGCGTGGTGAGTGAAGTCCAGAGAAGTGGGAAAAAAGTTGAAC
ACGAGGTTAAC Coding sequence (CDS) from alignment at sc0000289_pilon:268508..271218- >XLOC_042457 ID=XLOC_042457|Name=XLOC_042457|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000289_pilon:268508..271218- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTATAAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGA
AGTAAGAAACAAGATGGCTGTGTCAAGTTCTACAAATGATAAAAAATTTG
CTTTGCTGCAAGAATTCTTTAATTTAGATGAGAGATTTCGTGAAACTCTT
CATGCTGGCCTTCAAAAATTTTTATGGAATGGAAGTGTCACAAGGAAACA
CCCAAATGCAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTG
CATCTTTGGCAAGAGTTTTTCAAAAGAATGATGAGTTTCCAAGTGGTTTG
AACCAAGAGATAGAAGTGGACATTGAGTTCATGTATCTCAAGATGCTTAT
AAAGGTTTTGTCTGCTATATGTTTTATGGCATTGGCTGGTGAAGTAAGAA
ACAAGATGGCTGTGTCAAGTTCTACAAATGATAAAAAATTTGCTTTGCTG
CAAGAATTCTTTAATTTAGATGAGAGATTTCGTGAAACTCTTCATGCTGG
CCTTCAAAAATTTTTATGGAATGGAAGTGTCACAAGGAAACACCCAAATG
CAAAGAAAAATATCCAGCTTGCTGGCAGTGCTATAGAGGGTGCATCTTTG
GCAAGAGTTTTTCAAAAGAATGATGAGTTTCCAAGTGGTTTGAACCAAGA
GATAGAAGTGGACATTGAGTTCATGTATCTCAAGTTACCAGAATCAAAGC
AAGATCTTATCCAAGATATTGAGGCAGATCAAGGATACATAAAAATGAAG
CTTCAAGAAGATCTGTTTGATGACATTAAAAGCATTGGTTGGAATCTTGA
CCAATATGAATTTGATGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCT
ATTTTCTACCGTTCAAAATCAAATCAATTGCTAAGAAGAAAGTAGCTTAT
CGTGATGAGAAACAAGGACTCCGTTTGATGGCTGCTGCGGTTTATAATGT
TAAGAAGAGAAATGTGGACCTCAAGCCAATTGCTAATGAGATCACAAAAT
CTTCTGTTTCCTCAGAATACGTTTTAGAAGTGAAGGGTGAAAGAAAACTT
AAAATTTCTTTTGATACTGTTGTGGTTGTTGGGCTATCATGGCATTCTCA
AATAGGCAACGATTGGTTGAATAGACCTAAAAACTGGCCATCGCATGCTG
TCTGTCAACAAATTTTGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCA
AGAAAAAATAAGTTTGACCCAAACACTACTGAAATGCGCTATGCATATTC
TCAAACAGAGCGCAAACTTGTTAAATTACGCAGTCAGAATCAAAATTTTG
TGTACATGGTTTTTAAAATCATGTTTGTGAAATGGATCAAGCCAATTGAT
ACAGAAGAAATCAGTTCTTTCATTGCCAAAACTGCAATGTTTTGGATTGC
TGAGGAATTTCCACCTGAAAATTCTATGTGGGATGTTGTGGATAGTGAGT
GCTTGGTAACTCCCTTGAAGAAACTATTTTCTTGGCTGCTTGAAGCCTTC
AGTAAAGATACAATGCCGTACTACTTCAATGAAAAGTCCAATATTATTGA
GGGGATGTCAGATCAAACAAAGCAACTTATCATTACAAACATTGGAGAAG
TTTTGGGGGATTTACAACAATTTATACCCTCAGATATTGACCGAGAGCTT
GCTGTTGCTAAAGATATCTTCATTTGGGCAGAAAAGATGAACAAAATTTT
AACATTGATAAAGGACAAGAATTATAAAGAAGCGTTGAAGATACTACCAA
AAGAATTGATTTTGGATATTATTGCTTTTTATTTTGCTGAAATTGGCTGG
GATGTCATCCATGAGAAAATTACCAGAATCAAAGCAAGATCTTATCCAAG
ATATTGAGGCAGATCAAGGATACATAAAAATGAAGCTTCAAGAAGATCTG
TTTGATGACATTAAAAGCATTGGTTGGAATCTTGACCAATATGAATTTGA
TGAAGTTTACAAAGAGGTGAAATCTCCAGAAGGCTATTTTCTACCGTTCA
AAATCAAATCAATTGCTAAGAAGAAAGTAGCTTATCGTGATGAGAAACAA
GGACTCCGTTTGATGGCTGCTGCGGTTTATAATGTTAAGAAGAGAAATGT
GGACCTCAAGCCAATTGCTAATGAGATCACAAAATCTTCTGTTTCCTCAG
AATACGTTTTAGAAGTGAAGGGTGAAAGAAAACTTAAAATTTCTTTTGAT
ACTGTTGTGGTTGTTGGGCTATCATGGCATTCTCAAATAGGCAACGATTG
GTTGAATAGACCTAAAAACTGGCCATCGCATGCTGTCTGTCAACAAATTT
TGGGTTCTAGTAGTGTTGTCATTGCCAAACCATCAAGAAAAAATAAGTTT
GACCCAAACACTACTGAAATGCGCTATGCATATTCTCAAACAGAGCGCAA
ACTTGTTAAATTACGCAGTCAGAATCAAAATTTTGTGTACATGGTTTTTA
AAATCATGTTTGTGAAATGGATCAAGCCAATTGATACAGAAGAAATCAGT
TCTTTCATTGCCAAAACTGCAATGTTTTGGATTGCTGAGGAATTTCCACC
TGAAAATTCTATGTGGGATGTTGTGGATAGTGAGTGCTTGGTAACTCCCT
TGAAGAAACTATTTTCTTGGCTGCTTGAAGCCTTCAGTAAAGATACAATG
CCGTACTACTTCAATGAAAAGTCCAATATTATTGAGGGGATGTCAGATCA
AACAAAGCAACTTATCATTACAAACATTGGAGAAGTTTTGGGGGATTTAC
AACAATTTATACCCTCAGATATTGACCGAGAGCTTGCTGTTGCTAAAGAT
ATCTTCATTTGGGCAGAAAAGATGAACAAAATTTTAACATTGATAAAGGA
CAAGAATTATAAAGAAGCGTTGAAGATACTACCAAAAGAATTGATTTTGG
ATATTATTGCTTTTTATTTTGCTGAAATTGGCTGGGATGTCATCCATGAG
AAAATTGAAAATGAACTTGACAGGCTCACAGAGCGAGCTGAGAAAGAAAT
TGACCGCAGCTTAAAGAAAGTCGAAAAAGAACTTGACAGGTTCACAGAGC
GAGCTGAGAAAGAAATTGACCGCAGTTCAAAGAAAGTTGAAAATGAGGTT
GACCGTGTTAAAGAAAGCGTGGTGAGTGAAGTCCAGAGAAGTGGGAAAAA
AGTTGAACACGAGGTTAACTTGAAAATGAACTTGACAGGCTCACAGAGCG
AGCTGAGAAAGAAATTGACCGCAGCTTAAAGAAAGTCGAAAAAGAACTTG
ACAGGTTCACAGAGCGAGCTGAGAAAGAAATTGACCGCAGTTCAAAGAAA
GTTGAAAATGAGGTTGACCGTGTTAAAGAAAGCGTGGTGAGTGAAGTCCA
GAGAAGTGGGAAAAAAGTTGAACACGAGGTTAAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000289_pilon | genome | sc0000289_pilon:268508..271218 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1480-1692:214 |
| Aaloc | 343-1476:1483 |
| Aaloc | 1-342:2712 |
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