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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:872524..875737+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042415 ID=XLOC_042415|Name=XLOC_042415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3214bp|location=Sequence derived from alignment at sc0000001_pilon:872524..875737+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAATATCTCCAACTTCAAGTCAGACATCAATATCTTCGACATCAAGTCA
GACATCAATATCTTCGACATCAAGTCAGATGTCAATATCTCCAACATCAA
GTCATACATCAATATCTTCGACATCATCAAGTCAGACATCAAGTCAGACA
TCAATATCTTCGACATCAAGTCAGACATCAATATCTCCGAAATCAATTCA
GGCATCAATATTTTCGACATCAAGTCAGATGTCAATTCAGGCTTCAATAT
CTTCGACATCAAGTCAGATGTCAATATCTACAACATCAAGTCAGACATCA
ATATCTTCGACATCAAGTCAGACATCAACATCTTCGACATCAAGCCAGAC
GTCAATATCTCCGACATCAAGTCAGACATCAATATCTTCGACATCAAGTC
AGATGTCGATATCACAGATATCAAGTCAGACATCAATATCTCCGACATCA
AGTCAGACGTCAATATCTCCGACATCAAGTCAGACATCAATATCTTCGAC
ATCAAGTCAGATGTCGATATCACAGATATCAAGTCAGACATCAATATCTC
CGACATCAAGTCAGACGTCAATATCTCCGACATCAAGTCAGACATCAAAT
CTTCGACATCAAGTCAGATGTCCTCACATCAAGTCAGACATCAATATCTT
CGACATCAAGTCAGATGTCAATATCTCCAACATCAAGTCAGACATCAATA
TCTCCGACATCAAGTCAGACGTCAATATTTCCGACATCAAGTCAGACATC
AATATCTCCGACATCAAATCAGATGTCAATATCTCCAACTTCAAGTCAGA
CATCAATATCTTCGACATCAAGTCAGATGTCAATATCTCCAACATCAAGT
CATACATCAATATCTTCGACATCATCAAGTCAGACATCAATTCAGGCATC
AATATCTTCGACATCAAGTCAGATGTCAATATCTCCGAGATCAAGTCAGT
TATCAATATCTTCGACATCAGGTCAGACATCAATTCAGGCATCAATATCT
TCGACATCAAGTCTGATGTCAATATCTCTGACATCAATTCAAGCATCAAT
ATCTTCGACATCAAGTCAGACATCAATATCTCCGACACCAAGTCAGACAT
TGACATCTTTAACGTCAAATCATATGTCAACATCTCCTTTATCAATACAG
ACATCAAGTCAGATATTGACATCTTCGACGTCAAGTCAGGCATCAATATC
TCCGACATCAATACAGCTATCAACATCTCCGACACTAAGTCAGACGTCAA
TATCTTCGACATCGAGTCAGACATCAATATTATTTTCTGATTCTGTATTC
TCGACGACAATAACTGAAGTAGAAACTTCAAACAGAGAATCTTCTCAAGT
ATTTGCAACTGCTCCAAAATCACAGCAGATGGAACCAGAGATACAAGGAT
CGGGCTCTTCATTTAGTAACACCGACTCAATATCAACATTCAGTTGGCCA
CAAGTTACACTGTCATCAATGACATCTCCAGAGAATTTTACTCTAGAAAT
GGTTACCACAACAGATGCAGATCCAACAGATCTCTTATCCACGACTGGAG
TACAAGAAACAAAAGCAATGTCGAGTCCAGTACCCAATATCAATGATTCA
TCACTACCAATGACAACAGTGAATTTAATACCATCGAGTTTACCAGAAAC
ACTAGTAAACCAATCTCAATCAATACCGTCCACCCAGTCCTTATCACCAA
CACCCATTCTACAGGAGCATACGCCCTCTTTTCAATCGTCCATCCGATTC
AATAGCGCCGTACCCAATAACTATTCCCAACTCCAAACAAACCAGACTAT
ATTGTCACATTCAAGCATATCAGGgacttcttttcttctttcactTTTCA
CATCCGTCAACTCAAACCAATTCACATGCTTGTGCCAACCTTCAGTTTCC
GGCTCACCATCGCAAACTATATTCTCTGGTATTAACAATCAAAACTCCTC
TACACTTGAGAACAACTCAACCTCTCCTCAATTAACAGGCCCTGTCATTT
CCTCATTGAActccattcctatcacctccaactccattcctatcacctcc
AactCcattcctatcacctccaACtccactccTatcacctccaactccat
tcctatcacttccaactccattcctATCACCTCCAACCACCTGCAAACAT
CTGAGTCATCTTCACATTTTACAGAAAATATTCAACACACAGGCATCTTT
TCTTCTCGTTCTTTCTTAACTTCTTCCGAATCAAGGAAGTATTCATCGCA
AACTATATCCTCTGGTACTAACAATCAAAACTCTTCTACTCTCGAGAACA
ACTCAACCTCTCCTCAATTAACAAGCCCTGCTATTTCCTCCATGAACTCC
ATTCCTATCACTTCCAACTCCATTCCTATCACCTCCGACCACCTGCAAAC
ATCTGAGTCATTCTCACATGTTACAGAAAATAACCAACACACAGCCATCT
TTTCCTCTCATTCTTTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGC
TGGTGTTCTTCTCCTGCACCCATCCCAACACAAACTGTTCAATATTCACA
ATCTTTTCAAACCACGACTCACACCCCAACGGCTGACCAAACCAATATAC
ATACCCCTTCAACCTCTCAAACCACTAACCGCCCACCAGTCGCCCACCAG
ACCACTACCTATACTTCAACTCAAACCCCAGAAACACCCCAGACCACTAC
tcacaaccaatcagctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCT
CTTCAAGCAACAATAATCAAAATCAAGCAACAACTACACTTTCATATCTA
GCAACTACCAACCTCGTCACAAATCAACCATCGAACCCATCTCTTTCACC
AGACTCCAACTCTATTGTTCCTACACGACCTTCTTCATCCACCCAACTTC
CATTTACTACCAGTGTACGCTCCCCATCGCTGCCCTACCAACCCTCCATC
ACTCCATCCTTCTCTTCATCTTCAAGTGAAGCACTACAGAGTACACCCGC
CCTTCCACAGACCCTTTCCACCAATCAGCTCTCTACCTCCATCATGTACC
CTTTTATTACTTCCACACCACCATTTATCTCAATAATGACACTCTCCTCT
CTTTCCCTTTCTTCAGCACTGATTAAAGCGACAACTTCTTCACTCCCAAA
CTCTTTTCTTACTTTTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTT
TTCTTCAAGATGGT Coding sequence (CDS) from alignment at sc0000001_pilon:872524..875737+ >XLOC_042415 ID=XLOC_042415|Name=XLOC_042415|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4602bp|location=Sequence derived from alignment at sc0000001_pilon:872524..875737+ (Clytia hemisphaerica_ch_hm2_pilon)
TCAATATCTCCAACTTCAAGTCAGACATCAATATCTTCGACATCAAGTCA
GACATCAATATCTTCGACATCAAGTCAGATGTCAATATCTCCAACATCAA
GTCATACATCAATATCTTCGACATCATCAAGTCAGACATCAAGTCAGACA
TCAATATCTTCGACATCAAGTCAGACATCAATATCTCCGAAATCAATTCA
GGCATCAATATTTTCGACATCAAGTCAGATGTCAATTCAGGCTTCAATAT
CTTCGACATCAAGTCAGATGTCAATATCTACAACATCAAGTCAGACATCA
ATATCTTCGACATCAAGTCAGACATCAACATCTTCGACATCAAGCCAGAC
GTCAATATCTCCGACATCAAGTCAGACATCAATATCTTCGACATCAAGTC
AGTCAATATCTCCAACTTCAAGTCAGACATCAATATCTTCGACATCAAGT
CAGACATCAATATCTTCGACATCAAGTCAGATGTCAATATCTCCAACATC
AAGTCATACATCAATATCTTCGACATCATCAAGTCAGACATCAAGTCAGA
CATCAATATCTTCGACATCAAGTCAGACATCAATATCTCCGAAATCAATT
CAGGCATCAATATTTTCGACATCAAGTCAGATGTCAATTCAGGCTTCAAT
ATCTTCGACATCAAGTCAGATGTCAATATCTACAACATCAAGTCAGACAT
CAATATCTTCGACATCAAGTCAGACATCAACATCTTCGACATCAAGCCAG
ACGTCAATATCTCCGACATCAAGTCAGACATCAATATCTTCGACATCAAG
TCAGACATCAAGTCAGACGTCAATATTTCCGACATCAAGTCAGACATCAA
TATCTCCGACATCAAATCAGATGTCAATATCTCCAACTTCAAGTCAGACA
TCAATATCTTCGACATCAAACATCAAGTCAGACGTCAATATTTCCGACAT
CAAGTCAGACATCAATATCTCCGACATCAAATCAGATGTCAATATCTCCA
ACTTCAAGTCAGACATCAATATCTTCGACATCAAGTCAGATATTGACATC
TTCGACGTCAAGTCAGGCATCAATATCTCCGACATCAATACAGCTATCAA
CATCTCCGACACTAAGTCAGACGTCAATATCTTCGACATCGAGTCAGACA
TCAATATTATTTTCTGATTCTGTATTCTCGACGACAATAACTGAAGTAGA
AACTTCAAACAGAGAATCTTCTCAAGTATTTGCAACTGCTCCAAAATCAC
AGCAGATGGAACCAGAGATACAAGGATCGGGCTCTTCATTTAGTAACACC
GACTCAATATCAACATTCAGTTGGCCACAAGTTACACTGTCATCAATGAC
ATCTCCAGAGAATTTTACTCTAGAAATGGTTACCACAACAGATGCAGATC
CAACAGATCTCTTATCCACGACTGGAGTACAAGAAACAAAAGCAATGTCG
AGTCCAGTACCCAATATCAATGATTCATCACTACCAATGACAACAGTGAA
TTTAATACCATCGAGTTTACCAGAAACACTAGTAAACCAATCTCAATCAA
TACCGTCCACCCAGTCCTTATCACCAACACCCATTCTACAGGAGCATACG
CCCTCTTTTCAATCGTCCATCCGATTCAATAGCGCCGTACCCAATAACTA
TTCCCAACTCCAAACAAACCAGACTATATTGTCACATTCAAGCATATCAG
GgacttcttttcttctttcactTTTCACATCCGTCAACTCAAACCAATTC
ACATGCTTGTGCCAACCTTCAGTTTCCGGCTCACCATCGCAAACTATATT
CTCTGGTATTAACAATCAAAACTCCTCTACACTTGAGAACAACTCAACCT
CTCCTCAATTAACAGGCCCTGTCATTTCCTCATTGAActccattcctatc
acctccaactccattcctatcacctccAactCcattcctatcacctccaA
CtccactccTatcacctccaaGTCAGATATTGACATCTTCGACGTCAAGT
CAGGCATCAATATCTCCGACATCAATACAGCTATCAACATCTCCGACACT
AAGTCAGACGTCAATATCTTCGACATCGAGTCAGACATCAATATTATTTT
CTGATTCTGTATTCTCGACGACAATAACTGAAGTAGAAACTTCAAACAGA
GAATCTTCTCAAGTATTTGCAACTGCTCCAAAATCACAGCAGATGGAACC
AGAGATACAAGGATCGGGCTCTTCATTTAGTAACACCGACTCAATATCAA
CATTCAGTTGGCCACAAGTTACACTGTCATCAATGACATCTCCAGAGAAT
TTTACTCTAGAAATGGTTACCACAACAGATGCAGATCCAACAGATCTCTT
ATCCACGACTGGAGTACAAGAAACAAAAGCAATGTCGAGTCCAGTACCCA
ATATCAATGATTCATCACTACCAATGACAACAGTGAATTTAATACCATCG
AGTTTACCAGAAACACTAGTAAACCAATCTCAATCAATACCGTCCACCCA
GTCCTTATCACCAACACCCATTCTACAGGAGCATACGCCCTCTTTTCAAT
CGTCCATCCGATTCAATAGCGCCGTACCCAATAACTATTCCCAACTCCAA
ACAAACCAGACTATATTGTCACATTCAAGCATATCAGGgacttcttttct
tctttcactTTTCACATCCGTCAACTCAAACCAATTCACATGCTTGTGCC
AACCTTCAGTTTCCGGCTCACCATCGCAAACTATATTCTCTGGTATTAAC
AATCAAAACTCCTCTACACTTGAGAACAACTCAACCTCTCCTCAATTAAC
AGGCCCTGTCATTTCCTCATTGAActccattcctatcacctccaactcca
ttcctatcacctccAactCcattcctatcacctccaACtccactccTatc
acctccaaCTCCATTCCTATCACCTCCGACCACCTGCAAACATCTGAGTC
ATTCTCACATGTTACAGAAAATAACCAACACACAGCCATCTTTTCCTCTC
ATTCTTTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGCTGGTGTTCT
TCTCCTGCACCCATCCCAACACAAACTGTTCAATATTCACAATCTTTTCA
AACCACGACTCACACCCCAACGGCTGACCAAACCAATATACATACCCCTT
CAACCTCTCAAACCACTAACCGCCCACCAGTCGCCCACCAGACCACTACC
TATACTTCAACTCAAACCCCAGAAACACCCCAGACCACTACtcacaacca
atcagctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCTCTTCAAGCA
ACAATAATCAAAATCAAGCAACAACTACACTTTCATATCTAGCAACTACC
AACCTCGTCACAAATCAACCATCGAACCCATCTCTTTCACCAGACTCCAA
CTCTATTGTTCCTACACGACCTTCTTCATCCACCCAACTTCCATTTACTA
CCAGTGTACGCTCCCCATCGCTGCCCTACCAACCCTCCATCACTCCATCC
TTCTCTTCATCTTCAAGTGAAGCACTACAGAGTACACCCGCCCTTCCACA
GACCCTTTCCACCAATCAGCTCTCTACCTCCATCATGTACCCTTTTATTA
CTTCCACACCACCATTTATCTCAATAATGACACTCTCCTCTCTTTCCCTT
TCTTCAGCACTGATTAAAGCGACAACTTCTTCACTCCCAAACTCTTTTCT
TACTTTTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTTTTCTTCAAG
ATGGTCTCCATTCCTATCACCTCCGACCACCTGCAAACATCTGAGTCATT
CTCACATGTTACAGAAAATAACCAACACACAGCCATCTTTTCCTCTCATT
CTTTCTTAACTTCTTTTGAATCAAAGAAGTATTCATGCTGGTGTTCTTCT
CCTGCACCCATCCCAACACAAACTGTTCAATATTCACAATCTTTTCAAAC
CACGACTCACACCCCAACGGCTGACCAAACCAATATACATACCCCTTCAA
CCTCTCAAACCACTAACCGCCCACCAGTCGCCCACCAGACCACTACCTAT
ACTTCAACTCAAACCCCAGAAACACCCCAGACCACTACtcacaaccaatc
agctgccCAATCCATCAGTCCTTCCTCTTCTATTTCCTCTTCAAGCAACA
ATAATCAAAATCAAGCAACAACTACACTTTCATATCTAGCAACTACCAAC
CTCGTCACAAATCAACCATCGAACCCATCTCTTTCACCAGACTCCAACTC
TATTGTTCCTACACGACCTTCTTCATCCACCCAACTTCCATTTACTACCA
GTGTACGCTCCCCATCGCTGCCCTACCAACCCTCCATCACTCCATCCTTC
TCTTCATCTTCAAGTGAAGCACTACAGAGTACACCCGCCCTTCCACAGAC
CCTTTCCACCAATCAGCTCTCTACCTCCATCATGTACCCTTTTATTACTT
CCACACCACCATTTATCTCAATAATGACACTCTCCTCTCTTTCCCTTTCT
TCAGCACTGATTAAAGCGACAACTTCTTCACTCCCAAACTCTTTTCTTAC
TTTTCTCCTAATGCTCCCTTCCACTACATCTGCAGCTTTTCTTCAAGATG
GT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:872524..875737 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1456-2301:2369 |
| Aaloc | 520-1452:1160 |
| Aaloc | 403-516:707 |
| Aaloc | 1-402:1 |
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