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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:878602..881874+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042413 ID=XLOC_042413|Name=XLOC_042413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3273bp|location=Sequence derived from alignment at sc0000001_pilon:878602..881874+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAACTTGTGGTACAGATCTCGTGGCGACTTATGAGACAACACAATGTCT
AGATATAAGTAATTGCTTTGAGAGTGGATATTACATGGGTGGTCAAGGAG
AATCATGTGATACTTTCTGCTCTTCAAGAGGTAAAAATACTTATTTTGGA
TTAGCCAATGAATTGCAAGAGCTTTGTAAAGATGACAATGTCActtgcaa
tttgattggtcaaaaggatcacaaataaaccaatcaaacTCCCTTTATTT
GACGTAAATCCCTCATCTTTGAGACTTCTGGGTCATTCTTACATTAGAAA
TGGTGAAATCAATCTCTATCCTGAAAAGACAGAGACGAACATCGTCGCAA
GTGTCTTGGAATTATGTTAATATCCGGTTATCTttaacccagctgacaca
caacgttgtttcaacgttcatctaacctTATATAGACGTTATGAACGCTA
GATAAACAAAACGTTgaaaacgtcgaaaaaacgcgttgtgtgccagctgg
gtaagctAACATTCATCACATCAATGTTTCTTTAGGTATGGTCTGTTCAA
CTGAAATAAAAACGGGGAATTCACCGACTATATTTCAAAGCGTTTTACCA
AACTACAAGATGAGCACCAAACAACCAACGTGGAATAAACCTTACTCTCC
TCATTGCGATCAACAAAGCCATTGTTATGGATATTCGAATGTACCAGACG
AAGTGTCGTGTGAAGTGGCACCGATGGCTCAACAGCGCCGCTTTTGCCAT
TGCATGAACAGGGGTAAGCAAAACTCTGTTAGCTTAGACGGACAATATCC
TTTAAAACGGCTTCATAAAGTCagttatcaataaaatcaatCTTCTACCT
AAATTTCTTTTAATCGAGTGTCCAAAGAAAACAAGGcagcttttttttga
aaactgtcATTTGGGAGTAAGGTTTCACTTCCTGGACTAAGATTCCACTG
AAATCCAGAATATTTCGGCTATTTTTCCCGGGCTAGCAAGCATAAGATAA
GAAAGGGTTATTTTCTAAAGGaacggaaaatcttttttttagcGAGGAAA
CTGCTTAACTTATTTCCAAGTACCCAGAGTCTAAGTTTTGGTTTTTCTCC
ATATTGGCAGTGGAATCTATCTTAGTTCGGGAAATAGaatgttacatgtt
ttttttttagaagcaagtgtatgccccttggtcaggctcgtgtatgctta
agttctcaaaataacaatttgaaaaatatttcaggctgacacatATGTTT
ATGTTATGCTTGGGAATCCTACAAagctgagccttcatatgcttataagc
gttattcttataaaaaacttgtacCTAAAAAATGGTTGcatgtctttttt
tctttgatacAGCTGACCTTGGATATGCAGATTGGGCGCCATGGTCACAC
TGTTCACAAACGTGTGAAGGTGTGAAACGAAGAACGAGAGAATGTTTAGG
ATTACAATGTGATGGAGATAGTGAAGAAATTAATAATTGTGGAACGGAAC
GATGTCCTAGTAAGTGAAACAAAGCTTTCCTATTGGTTAGAAATGACGTA
ATTCCCCACATCAGCCAATAGAATACTCACAATATAAGTATCACATAGAC
CTACCTGATCTAATCAATGTTTCTGATGGAAAAAACGACCTCGTTCAAAT
GTATTGGACTGCAGCTCTCGCTACAATGATTTACAATTTCAGTCGATTTC
CTAAGAACACAGGTGCTTGGTTTCAAGGTTGTCACGGTTAGATTCAAAGA
TTGATTATATTCACACTTTTAAAACGCGAGAGACTTTTATTTTACTTCCA
AAACAACGATAAACCTTTTACTTAACTTACAGTGCATGGCGGCTTTTCCG
AGTGGTCGTCATGGTCACCATGTGACGTCACATGTGGCGGTGGCACCACA
CACCGCTCACGCCAGTGCAATAACCCAACTCCACGATACGGTGGCAATGG
TTGTATTGGATCTGTAGAAGAAGATGATACGTGTAATAATCATTTCTGTC
CAGGTTTGTGTAATAATTGAACTCGGCTTTCTAGtttttttACTCAGAAT
TATACGATCATCTCGACTACACTATGTCACCAAAAGGGAATAATTTAGGA
GACCTAACTCTAACGACGCTTTGTTTTTTCCGTCTACCACCCTTTACGGC
TGTAAACGTCCCCCACATATATTTTCTCGCGTTTACTATCCCAGAAGATA
GCGTCGTCTAACTGAGCAACCATTCAATCACTGGTAAAAAGAAAGGAAAG
TTTTTGCTTAACCTCCCCATATTCAAACTTGTGGTTCAGCCCCTAACATT
AGTAAGTTTATGTATCAgtatttttctgcgacggagacggccTTTTCTAT
TTATCTAAATCCTGAATTGTATAAACTACGAAACTCGCCAAGTTTCTCTC
TATTTTATTTCTGAATTTGACATATAGATAAAATTAACTGACGCCCAATT
CTATTTCAGTGGATGCAGTTTGGTTAGAATGGTCTGATTGGTCATTTTGT
AACAAAGCATGCGGTAATGGTACTGGCATGAGAACGAGGCAATGTAAACA
TGGTATGTATGGTGGTAGAAGAGATTGTATTGGGAATGGTGAAGAAGAAT
TTGAATGTAACACTCATACATGTCCACGTAAGATTTGATTgaaagggata
accagataaaaaagttaaattcaaCCAAAAGATTCCTTCCATAGACCTTA
GCAGAACCTTCAAATTTTACTGGCTACTTGTTTTTCAAAGTCAGAATATT
TAGGCTAGTTATTTTCCGTTTCTTCTTGGAAACTTTTGGTCTTACTAAGG
ACCATGGAAGGAATAATTGAGCTAAGTGTTACTTTTATCTGGTTATGCCT
TTAAAATACCATTGGGTGAGAGCTTCTAGTATCAAAGACAAGAGGGGTTA
GGAGTTAGGAGCAACTAAAATCATACAAGAGCGTTTTTCATAACTGCGCA
AGAAATTCAAATCCATTTTCTCTACAAATATTTAATTAATGAGCAAAGAC
TTTTCTACATCTCACTCTTTCCCCtcaatgaaaactttttctccAAGAAA
TGTGATTTTGATGGCCTTTGCTTTTAACATCCACCCGGTAACAATAAGTA
TTACTGAACTCGCTATTGCATTTGCGCTTGCTAGAAAGTATTCAATACTA
AGCAACCAAGTTTTCGTATCTTTATTCAAATAACTTTCTTGTTTTCTGGA
TTTTTCGACCGTAAAACTTATTTGTTTTACAGCTGTTTGGGCGAACTTGG
TGCTTAGATTTGACAGTGAATAT Coding sequence (CDS) from alignment at sc0000001_pilon:878602..881874+ >XLOC_042413 ID=XLOC_042413|Name=XLOC_042413|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1770bp|location=Sequence derived from alignment at sc0000001_pilon:878602..881874+ (Clytia hemisphaerica_ch_hm2_pilon)
AAAACTTGTGGTACAGATCTCGTGGCGACTTATGAGACAACACAATGTCT
AGATATAAGTAATTGCTTTGAGAGTGGATATTACATGGGTGGTCAAGGAG
AATCATGTGATACTTTCTGCTCTTCAAGAGAAAACTTGTGGTACAGATCT
CGTGGCGACTTATGAGACAACACAATGTCTAGATATAAGTAATTGCTTTG
AGAGTGGATATTACATGGGTGGTCAAGGAGAATCATGTGATACTTTCTGC
TCTTCAAGAGGTATGGTCTGTTCAACTGAAATAAAAACGGGGAATTCACC
GACTATATTTCAAAGCGTTTTACCAAACTACAAGATGAGCACCAAACAAC
CAACGTGGAATAAACCTTACTCTCCTCATTGCGATCAACAAAGCCATTGT
TATGGATATTCGAATGTACCAGACGAAGTGTCGTGTGAAGTGGCACCGAT
GGCTCAACAGCGCCGCTTTTGCCATTGCATGAACAGGGGTATGGTCTGTT
CAACTGAAATAAAAACGGGGAATTCACCGACTATATTTCAAAGCGTTTTA
CCAAACTACAAGATGAGCACCAAACAACCAACGTGGAATAAACCTTACTC
TCCTCATTGCGATCAACAAAGCCATTGTTATGGATATTCGAATGTACCAG
ACGAAGTGTCGTGTGAAGTGGCACCGATGGCTCAACAGCGCCGCTTTTGC
CATTGCATGAACAGGGCTGACCTTGGATATGCAGATTGGGCGCCATGGTC
ACACTGTTCACAAACGTGTGAAGGTGTGAAACGAAGAACGAGAGAATGTT
TAGGATTACAATGTGATGGAGATAGTGAAGAAATTAATAATTGTGGAACG
GAACGATGTCCTACTGACCTTGGATATGCAGATTGGGCGCCATGGTCACA
CTGTTCACAAACGTGTGAAGGTGTGAAACGAAGAACGAGAGAATGTTTAG
GATTACAATGTGATGGAGATAGTGAAGAAATTAATAATTGTGGAACGGAA
CGATGTCCTATGCATGGCGGCTTTTCCGAGTGGTCGTCATGGTCACCATG
TGACGTCACATGTGGCGGTGGCACCACACACCGCTCACGCCAGTGCAATA
ACCCAACTCCACGATACGGTGGCAATGGTTGTATTGGATCTGTAGAAGAA
GATGATACGTGTAATAATCATTTCTGTCCAGTGCATGGCGGCTTTTCCGA
GTGGTCGTCATGGTCACCATGTGACGTCACATGTGGCGGTGGCACCACAC
ACCGCTCACGCCAGTGCAATAACCCAACTCCACGATACGGTGGCAATGGT
TGTATTGGATCTGTAGAAGAAGATGATACGTGTAATAATCATTTCTGTCC
AGTGGATGCAGTTTGGTTAGAATGGTCTGATTGGTCATTTTGTAACAAAG
CATGCGGTAATGGTACTGGCATGAGAACGAGGCAATGTAAACATGGTATG
TATGGTGGTAGAAGAGATTGTATTGGGAATGGTGAAGAAGAATTTGAATG
TAACACTCATACATGTCCACTGGATGCAGTTTGGTTAGAATGGTCTGATT
GGTCATTTTGTAACAAAGCATGCGGTAATGGTACTGGCATGAGAACGAGG
CAATGTAAACATGGTATGTATGGTGGTAGAAGAGATTGTATTGGGAATGG
TGAAGAAGAATTTGAATGTAACACTCATACATGTCCACCTGTTTGGGCGA
ACTTGGTGCTTAGATTTGACAGTGAATATCTGTTTGGGCGAACTTGGTGC
TTAGATTTGACAGTGAATAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:878602..881874 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 847-885:3235 |
| Aaloc | 679-843:2462 |
| Aaloc | 508-675:1835 |
| Aaloc | 361-504:1365 |
| Aaloc | 133-357:538 |
| Aaloc | 1-129:1 |
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