XLOC_042411 (mRNA) -

Overview
NameXLOC_042411
Unique NameXLOC_042411
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000001_pilon:885053..900621+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042411 ID=XLOC_042411|Name=XLOC_042411|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=15569bp|location=Sequence derived from alignment at sc0000001_pilon:885053..900621+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACCGAGCATGAAATATACATTAGAAGTTTGTGCTTATAACGCAGT TGGTAATGGACCATGCGAGAGGCTGACAGTATATACTCTCGACAGCGGCA AGTTAATCTAGAAATGTTTAAAAAGTCTTTTGTTAGCCTAATCTAAGGAT TGTATGTGAAATTAAAAAGTATTCCAAGCATTTGGCTTGACAATGAATGT TCAATtgttcaaaaatctttgataCATGACCCTCTCCTTGACAATTTTTA TCACAAGAATTGTTTGTGTAATAAGGGTCGAATGACGTTAAATATCTTTG AACTGAGCTATTTTTTGGATTGAAAATTCAATCATCTCTATCTGCAACCA AAAGATCCTTATGCTCTGTGAATCTTTTCCTCACGAACTTTAAACTTGTA CTATCCCAAATTTGCTGTTTTGATGATTCCTATATTGCTCATGGCGGTAC GAACCTCCAtctgtaaaatcaaaaagagaTGCAATTGGCTATGGATACGA AGAGATTATCTCAAGTTATGATCTCAATGTGATAAATTATTTATtccctt tttccaattttcagctCCCACTTCACCTCCATTAAACGTTCAagtaaaaa cagaaaaaacacatGACAGCCTTACCATCACATGGGATCACCCAccacaa aacaaaatacacgGAACATTACTGACATACAAAATCACTGCAGAATCACT GTCAAAAGCGAATGTCAATCATGACCTTGCAATTGTACATAATGTTATCT CAGTACATGGATCCTTAACAGAGGCAACTATTGATGGATTACAAACTTTT AACGAATACAGACTTACAATACAAGCAGTCAACCAGTACGGTGAAGGAGT GTCTACTTCAGTTACTGCAGGTATGCTAAGCATTATGTTTGTAATTTTAT CTTGATTAAACTGTtgcagggggggttggaaattataCTTAAATAAGgta atattcttaaaaattaaaaaacggggaggggggtcctaataaggtccggg gggttggaaaatctccgaaaaattaacaagcggggcgTTTATTTGCAGCC TAATAGTAGCCACTTAGACTTAGCTAGGTGATGATAAGGAGCTAAATGCC GATGGAAAAGTTCTTGCCCTAGAGGTAGATTTCTTTTAATTAGAGCTAAA AAATCCAATAGGCAtaactgaaatttcattattttccaaATAGTCCCCTT TATGAACACAAAATCAATTAACATTTTAGAAACCTGTCGATGTCCTGAAC TCATCTCCACCAATTATTTTGTCCTCAAGCCTTACTTATACCGCGATACC GATGGTGAATTAAACGGTCTCTTCCCGAAAGTTCTAAACGAGATGGTACA AGCTGCCTGTGGACAATGTACTCGCCCTCAAAATGCATTAGATAGTATAC TAGATAAGGAGAAAACTGGCCGAGGAGGTTTAGCACAGAAGGCCACTGCA AAAGAAGCTATTCAAGATATAGACCAGTATACAGAACTCACTTTTCCGGT AGCAGCACATGATCAAATGTCTGAATTCATGGGTAGGTTTTACTTTTAAC TCACAATTCTCTCTTGTATCAATTCCAAACTGAGAATATATAACACTAAA GAGTAGGTAATCATCAAACATcagaattttgtaaaaacatTTGCTTTTAG AATTTTAAGTTGATTAACTGTGGGTACATGAATTAATAAAGCGTTTGTCT CAtagtttttataagtttcccatttctgcacttttccggaatctttccgc tattttccTGGGGTGTAACCGGCATTACAATCGTGGTCAAAACTGATGTC CAATAACTTATTTCTACCGACAAAGTCCCCCTCTCCCCCCAAAATCAATG TTGGAGTTGAATTTTTGCACCTTCACAAGACTCAACATCAACACTGAtat tggggggaggggggtggacaaacagttctgtccaggattgtagattggaa aaagtttgtttctaatggtacggaaaatcttttgtttactCACCATTTTT CAACTGCCCAAATCCTGGTCTTTTTCTGCTAgtaaagtggcaaaggaatc tttgTGCGGAAATAggaatcttataaaaaacgacggtAGTTGATTGAGAA ATTTACTTACCCACTACAATACGCTATGAACATGAATACACGTTGCAATT TAGACGTGGAAACAAAACGCGGGGTGTTTTAGAGctcacaaagccttaaa atgctcttagcttgttcttaccattgttcttagcattttggccatggaag ccttatgtttttatatagtttgttcttatataaaaaacgtgtagtccaAA CGCCGCATCAGAAATAAACTAAGCAACCTTTTTTCCAGGGTACAAATTTA TTTCATTGGTACATCACCCTGGAATCGCAGTCGTCGTCAAGGTTATGACT ATAAATGACATGATCGAAACACTGATTGGAGATATGTTGAAAATATGGCC catctttttgttaaatttcttatttatgGTCATTGTTGGATTCTTGGTTT GGATAATGGTACGTTTACGTTCAGAaattttacgtttacttttagtaatt ttacgcttattttcagtaattttcagtaattttacgtttactttcagtaa tttcatgtttattttcataaattttacgCTTACTTTCAGTAATTTTACGT TTACTTTCAGTAACTTTCAGTAATTTTACgtttattttcaatgaatttaC GTTTACTTTCAGAAATCTTACGTTTACTTTCAGTAATTTTACGTTTACTT TCAATGATTTTACACTATTGTTATTTTTCCCCCATAGGAAAACCCACGTC TTTATAACGAGGGAGATTTTTCCACCGGTGCATTGCGTGGTATCTTTGAA GGCTGGTATTGGGCTTTTGTAACTCAAGGTAGTCAAGGGTGAGTATGTAT TTTTCGTGTCCGAAGAGACTGATCCATGTATCTTTTTTATATAGTTTAGC GTGTTTGTGTAAGTCCCTTAATCAATTAGTGGGTTTATATGCCATTTCAC AATCGAAATGGaccatgggtaatcaggactgattccGCCTCCATAACGGC TTTCTGATGGCTAGGCGcaataatcttcaaaaattttcaaatctttggaC CAATAGCcagtcgtcattagcgcgcagtggtccttaTATTACCCATTATG CTTTACAACTGTGAAATGTCCTATGATAGTGGAGTAGTCTTCTAGCATGC TAGATGACTATTTCGGACATTGTTaaaaaaaGCGCAGGATAATGGAACGG ATAATTTGAAGTTTGAGCCAACTGACATTATCTCGTAACAATAATCGCAT TAGCAAACAGCATCCATATTATACTGTATACACGGATTATAAGTGACTCA AGTCGAGTAGCAGATTCAtcactacaatcagtgccaaaatacttggcaca aaagggaaattcccaacgaaattttataaccacaaacaattttgaagcgc tctaaattaggttggaagggtagagttttaactcttatttttaacgctag actcaagaccttaggatctctaGACTAGAGtatacttctggctgaacttt gctttttgatgatttttgatgacgctgagttcaatgaagtagactaggag catttgacgaagttgccattttgaaaaagaatgtctaaaatccaaataac aaaaaaactgcTCGGAGTTGAAAGGTAtagtcaaaaatgagaaacaaaca tcaataacagatttgcaatcccttattctcaaatagaaacattgcttcat actgtttttatcttccaaaaacaactaaaatctggcggactgttttacag tcatAACTCTAGaatgttttacagtccgcctaagcaaaagcatattacca tatactaccgggccacttcagtctatcaaaaagctttaagtggacccccg GGGTAtaggatctcaggattcaaaagttcaaaaatggtccagtagtgctt gaaatatagcctagaaaccaataaatccctcctagatcgaaatattcgat gaaaccAAGTTGAagggcccgaaattgacattctcgcttgaacttcaatt ttcgaaaaatggtaaaatagccaaaattaccaatatgttatggcactgat tgtagctcGAGTTTAGAATTGCGATTTCGACCTCCGTCTTATTTCTTTAG ATTTGGTGATTTCATCCCACGTCGTATTCAATCACGCGTTCTGGCCATGG TCTGGTCATTAATCGGTATTATCATGAACTCACTGATTGTTGGATCACTC GTCACTACTCTTATGTCTCTCAATATTCAAAAGGATGTCAAGCTATATGG CACTAAGGTTCGGAtttttttATAACCCTATCATACATGCATAGTAATTA GTCATAATAGTTGGGAAAAAGGAGCATTCCTTCCAATTACAAAATCCACA ATTGTATTGATTTTAAAGTTGTTTAACTTCAAATTCAGTAATGTAAAgtt ttaaccctttcagtcccacgcGACCGCACTGCGGTCCCTTTGGACCCGTC GTTTTTTCCCAGAGGACTGCATAGCGGTccctgatttattttttaaattg tgatGTTTTGGCGGGAAATAAAGAGATATCTTTAAACAGCTTTCAAAGAA GATAAGATAGCGCGTCGTGTGCaaaaaaccgcgtaaaaaaagcttgttcg agtaaaaagttttgttcacaaaagtatttacaaaaatttttgcaagcaaa atctgtaaggccgaaaatgggattttttacaacttctatcaatcattatg atttttctatgagGGCTAAtcaaataattcttttttcagttagtagatac tgttgtgctaaacatttatcagaagaatgaatgggtttaaatcatttttt cataaaaaaaaattaccattgaatggcaaaaaaatgctgttttcaaattt ttttttgcctctctctggtcacgtgacacgctgatgacgtcatttttcaa ttgtttttctatcaaaatgatccTCATACTATAAGTGAAAAAGGGCGAAA ACTTTAGAGGACTAGGTTTAGTGATTCCAGAGATATTGAAGCATGAGTAA ATGCATTCAAAAACTCGTTTTACGGCTCTGGGAAAGTAGCTGTGAAAact ctgggactgaaagggttaagtCTGAGTTTTTACAAATTTAGACTTAAAAT TTAGGATGAGCTTAGGGTATAAGGAAGGTTATAAGTTTGTAAGGTGGTAA GGTAGGGAATATAGCCTGGTAGCCCTCTCAAATCGAAATGCCCGAGGTAA TAGAGTAGAAAATAGCTAATTCCAGCATTCTCGCCCGAATTCTTAATTCA GATTATTCGTGAGATACTACCACCACTATAGTAGAAACTTACCAAAGAAA ATCTGCACTGAGATTTGTTTTGACCTTTTTACCCACTGAAGTTTGAATCG ACtatactagacggttcccgtcgtcgccaacgccggttaacggttttgct tgcacatcaaaagcctttaaaatacgataatgtgggttaattcctgacat cgttttggcttaaaatcccgaatacaataataaaaattatacttctaaac tttctacattagtcaaaattttcccgtttgttggcttcacatgaggacag cttaagaccggcgcatatgcaatgcaaccaacattgaaacctttttaaat aatgttagacgaagtttaatcatcaaataacaatgttggattttgttgcg tgtgttgatataaaataattcgaaatcgtgcaacaaaaatgccacacctt tttatttgaaactttgtgacgtcgcagtactttttcatgaaattgacgtc agaacttttttcgtttacaaatagcagtgtagagtcttctctaacccgag ttttctacgcttgtcaaacttagcgcgagactttttgtatcgaaggtgga taggttttccagccgcggcgttcaaattttagaaaccttaacatatgtta ctgggctagcgttacagacatttttcataaactcatttagtatagtacta gccgtcacccggcgtcgcacccgccgagtagagtgttgttgaacacatca aaagccctttggatggtgggggagtataaaaagatctgatttgtatattg taagccgaaaaaacgaaatattaccacttatCAATAATCGAAGCTTGAAA AATCGCATATTTtatgtttggtgacgtcattttggccctaagtgacgtca tcgaaagggtaatcaactttttacttcactgaaatcaatttgtcatttaa cCAAAAtattctcttgatgatttccgatccaatgaggggtcaatcattgc ttaaatcgttctcaaactcgagatattatatttttccgtttttaatgacg tcatcggaccgaAAAAGCCTCAATTTgactatttctaattttgaagtTTC TATATAGCTACTCTTACCCCTCCCAACTTATTCTTCattaaatttccgat ccaaAGAGAGGTCAACGACTTCCCAGCTCctatccaatctcgagatatag catttttcctgttttgatgacgtcatcaactgaaaacgcctaaaaattca gccaaattttaaagtcacactcaagccatataaaccctcccatcttattc tccataaaattctcgatccaatgaggggtcgacgacctcccaactccttt tcaaactcgagatatcgcattttgaagattttccgaaatctgtgacgtca ttgggtctctttacccctaatgttatcaacggtcgattcgcgaattttga aatttttgcggtcaatgggtagcttatgccccaagggtcccaaaaaacca aaaaacgtcaattatttccacgggaaagtgggtttttaaatttgcgaaag atttgcactgcaacgacttctttaaaaaacgctaattttcacactcttcc cttgaccactttcgctttcgttttcgaccaCCCACCCAACCATCTAACCA AAAagtcggtcacgtaactctcgaacccccatctcaaaaatccaaaatgg ccaccccacggctcatagaaaattagacttttagtatatagactagccgt cacccggcgtcgcacccgccgagtagagtgttgttgaacacatcaaaagc cctttggatgatGGGGGAGTAtaaaaagatctgatttgtatattgtaaac ccaaagaacgaaatattaccacttttcactgatcaaaactcggaaaaccg catatttcatgtttggtgacgtcattttggccctaagtgacgtcatcgaa agggtaatCAACTTTtaacttcactgaaatcaatttgtcattcatccaaa agattctcttgatgatttccgatccaatgaggggtcaatcattgcataaa tccttctcaaactcgagatattgtattttttaaattttgatgacgtcatc ggacccaaaatgccCAATTTGATTAAATTCATTTTCGAAAGTTCCTATAT ACCCACGCTTACCCCTTCCAACCCattctccattaaatttccgatccaat gaggggtcaaccatttTCTAACTCCTatccaatctcaagatatcgcattt ttcctgttttgatgacgtcatcaactgaaaacgcctaaaaattcagccaa atttcaaagtcataTCTAAGCCATACAAACCCTGtcatcttattctccat aaaattctcgatccaatgaggggtcaccgaccttctaactccttttcaaa ctcgagatatcgcattttgaagtttttcctaaatctgtgacgtcattggg tccctttacccctaatgttgtcaacggtcaattcgcgaattttggaattt ttgcggtcaacgggtagcttatgccccaagggtcccaaaaaaccaaaaaa cgtcaattatttccacgggaaagtgggtttttaaatttgcgaaagatttg cactgcaacgacttctccccaaaaacgccaattttcacactcttcccctg accactttcgctttcgttttccaCCACCCATCCATCCAACCAACCAaaaa atcggtcacgtaactctcgaacccccatctcaaaaatccataatggctcc cccacggctcatagagaattagacttttagtatatagactagccgtcacc cggcgtcgcacccgccgagtagagtgttgttgaacacatcaaaagccctt tggatggtgggggagggtaaaaattgtatattgtaagcccaaagaacgaa atattaccacttttcactgatcaaaactcggaaaaccgcatatttcatgt ttggtgacgtcattttggccctaagtgacgtcatcgaaagggtaataaac tttttacttcactgaaatcaatttgttaTTCATCCAAAcgattctcttga tgatttccggtccaatgaggggtcaatcattgcataaatccttctcaaac tcgagatattgtattttttaggttttgatgacgtcatcggacccaaaatg ccccaatttgaatatatttattttctaaagtttcTATATACCCACTTTTA CCCCTCCCAACTGATTCTCCATTCAATTCCCGATCCATTGAGGGGTCAAT GACctccaaactcctttccaatctcgagatatcgcattttttctgttttg atgacatcatcatctgaaaacgcctaaaaattcagccaaattttaaagtc acacTCAAGCCATATAAACCCTTCCATcgtattctccataaaattctcga tccgATGAGAGGTCActgacctcccaactccttttcaaactcgagatatc gcattttcgagtttttcccaaatctgtgacgtcattgggtccctttaccc ctaatgttatcaacggtcaattcgcgaattttgaaatttttgcggtcaac gggtagcttatgccccaagggtcccaaaaaaccaaaaaacgtcaattatt tccacgggaaagtgggtttttaaatttgcgaaagatttgcactgcaacga cttctttaaaaaacgctaattttcacactcttcccctgaccactttcgct ttcgttttccaCCACCCATCCATCCAACCAACCAaaaaatcggtcacgta actctcgaacccccatctcaaaaatccataatggcccccCACAGCTCAAT acgaattagacttttagtatatagactagccgtcacccggcgtcgcaccc gccgaggagtagataagctgaacgcatccTAAGCCCTTTGGATAGTAAAG GAGAAACTATAGACTGAATCAATcccaaagaacgaaaaattgcCACTTGA GACCGATCAAAACTCGATAAATCGCATATTTaatgtttggtgacgtcatt tgggccttaagtgacgtcatcgaaagggcaataaacttttcacttcactg aaagtATTTCTTCATTGACTGAAAAGGTTCTattgatgatttccgatcca atgaggggtcaatcattactgaaatccttctcaaactccagttattgtat ttttcaggttttgatgacgtcatcggacccaaaatgcctcaatttgaata tatttattttcgaaagtctCTATATACCAACTCCTACCCTCCCAGCTTat tctccattaaatttcccATCAAATGATGGGTCAACCATCtcctaactcct ttccaatctcgagatattggatttttcctgttttgatgacgtcatcaact aaaaacgcctaaaaattcagccaaattttaaagtcacacTCAAGCCTTAT AACCTTTCtcatcttattctccataaaattctcgatacaatgaggggtca ccgacctcccaactccttttcaaactcgagatatcgcattttgaagtttt tcccaaatctgtgacgtcattgggtccctttacccctaatgttttCAACG Atgaattcgcgaattttgaaatttttgcgttcaacgggtagcttatgccc caagggtcccaaaaaaccaaaaaacgtcaattatttccacgggaaagtgg gtttttaaatttgcgaaagatttgcactgcaacgacttcttcacaaaaac gctaatttccacactcttcccctgaccactttcgctttcgttttcaacca cccacccaaccatccaaccaaaaaatcggtcacgtaactctcgaaccccc atctcaaaaatccataatggcccccTCACGGCTCACTCACATTCTACGTT TAGtaatatagactagccgtcacccggcgtcgcacccgccgaggagtaga taagctgaacgcatcataatccctttggatggtggggagggtcaaaagat ctgatttgtaaacccaaacaacaaaaaatttccaCTTTAAATGGTTGTAA ACTAATGATATtgcaaatttaatgttttgtgacgtcaccGAAAGGGTAAT GAgcttttcacttcactgaaatcaatCTGTCATATAGCCAAAAGATTCTC acgatgatttccgatccaatgaggggtcatccATTGCTTAAATCCTTATC AAAttcgagatattgtattttttagcttttgatgacgtcatcggacattt acttttgaaagtttctatatacccacttttacccctcccaacttattctt cattaaatttccgatccaatgaggggtcaacgacctcccaacccgtttcc aatctcgagatatcgcatttttcatgttttgatgacgtcatcaactgaaa acgcctaaaatttaagccaaatttcaaattcactttcAAGCCTTATAACC CCTTCCATCTTATTCGCCATagaattctcgatccaatgaggggtcaccga cctcccaactccttttcaaactcgagatatcgcattgtgaagtttttcca aaatctgtgacgtcattgtccctttacccctaatgttgtcaacggttaat tcgcgaatttcggaatttttgcggtcaacgggtagcttatgccccaaggg tcccaaaaaacccaaaaacgtcaattatttccacgggaaagtgggttttt aaatttgcgaaagatttgcactgcaacgacttcttcgcaaaaacgctaat ttccacactcttcccctggccactttcgctttcgttttgaACCATCCATC CAACCAAAAAACCAACCaaaatcggtcacgtaactctcgaacccccatct caaaaatccataatggctcccccacggctcatagagaattagacttttag tatatagactagccgtcacccggcgtcgcacccgccgagtagagtgttgt tgaacacatcaaaagccctttggatggtgggggagtataaaaagatctga tttgtatattgtaagccgaaaaacgaaatattaccacttatCAATAATCG AAGCTTGAAAAATCGCATATTTtatgtttggtgacgtcattttggcccta agtgacgtcatcgaaagggtaataaactttttacttcactgaaatcaatt tgtcatttaacCAAAAtattctcttgatgatttccgatctAATGTGGGGT CAATCATTACtgaaatccttctcaaactcgagatattgtatttttaaggt tttgatgacgtcatcggaccaaaaaagcctcaatttaaatatatttattt ttgaaagtttctatataccAACTATTACCCCTTCCAACTtattatccatt aaattttCGATCAAATAAGGGGTCAACGACTTCCCAGCTCctatccaatc tcgagatatcgcatttttcctgttttgatgacgtcatcaactgaaaacgc ctaaaaattcagccaaattttaaagtcagACTCAAGCCATATAAACTctc ccatcttattctccataaaattctcgatccaatgaggggtcaccgacctc ccaactccttttcaaactcgagatatcgcattttgaagtttttcccaaat ctgtgacgtcattgggtccctttacccctaatgttgtcaacggtcaattc gcgaatttcggaattttCGCGGCgaacgggtagcttatgccccaagggtc ccaaaaaaccaaaaaacgtcaattatttccacgggaaagtggtttttcaa atttgcgaaagatttgcactgcaacgacttcttcacaaaaacgctaattt CCACACTTTtccctgaccactttcgctttcgttttcaaccacccatCCAA Ccaaacaaccaaccaaaatcggtcacgtaactctcgaatcccccatctca aaaatccataatggctcccccacggctcatagaaaattagacttttagta tatagaagATGTTTTCAATTTGTTTAACTGCTTACTTTCCAGGTGGCCGT AATGAAAGATTCCATTGAAGAAAATACGGCAGTTCGTCGTAATGCAGAAC CGGTGCCTAGTAGGTTTCCTTTCTTCATTATCAAACTTCTCAAAATGTAG TAACCCAGATCTCATTTATTGTATACCTCagagacccggtaggatttgtT TCAGCCAGTGGttgtaaaaataacggactgaaattcAATAGGATTGATAT CTCCATGTTTTTGTGGCTGGGGATCTAAATTAGTTAAAgttagaaaattc agtggggatgagaaaatagcataatattttgcagtgaggattcgcttatt cgaatattttcagtggggaaaaaattggagtataaatTTCCACcgtggga cgatattttgaccaatttttccagtgggaaggggtatAACGTCGGCTTTC TTTTGCATCTTTATGGAATGTTTCCGCCCTCAATTAGCAATGAATTAGGC TATCAGATCCTGCTTTGCTTCAACCGTAAAACCTTTTCAAAGAGAGACTT AAAAACATATGGATGTGTCCATTGTGTAGTCTATGGATTATCtaccaaaa gtttgaaaaggtCAAGCTCAGATCCGCAGCTAATCATTTATCGTCTTTTT TCCTAGAACTATCGATCGAGGAGATGAAAAGGGCCTTATTGAATGGTGAT GTCGACGCAATGCTTATGGATGTGTATACACTAGCAGAATACCCTGAAAT TACATCTAGCTCTGAATTTGATGTTAAAGAAATTATACATGTAAGCGCAT ATCATAATTTATTGAAAGCTTTGACTTTATTTggggggagggggCAATCA gtcaaattgaccgacgggtacgTGTGGCGgctaagggtatgtttttcaag ataTCAAAAATTCACTCTAAGAGTGGACTTttgaaaatgcactgtaaggg tgaaagtttcatcaaatccgggaaaaattgcaattttcgcctgaaaattc tgtttttttttgttctatAAGAGTtaaaattatgagaaaaatgCATATTA AGGGTACTAATTTCACCGATTTtctgctgcactgtaagggtgcaattcta aaagccaattttttcaacgcacataccgtcagttagAAAACCCAATGCCC CCCATCAAGACTTTTCAGACTATTTTAAATAATCTTAAAACAGATTATCC GTCACCATGCTCTGTCTTAAAGGGCCGTGTCGAATATGATAAGGATGAGA TCGAAGCTTGAGTAACAATCAAAATCTGCTTGGAAATCACATTCTAACga gcaaaaagtttttttatgcgttttggattttgaaagattAGAGGACTCGA acctttctcaatttttcttagAAAGAAAGTATAGAAGTATCTTTGTCTTC TTTACAGGCACGAAAAGCGTACGGATTTGTGTTAGCAGGTGCATTGGAGA ATGTGGCGAGCGCTGTCGATGTTTACATCAAGAGCAATGAAGATCGAATC CTCAATATCATTTCTAACCAGACCAAACCACTTACTGTAagttagcctat ttcataggattcgtgcatcTGTTACAATGCTTTTTCCTATTCTTTTCAAA GAGGAAAAATCACAAATCTGTGCAGATTTCCTTTCAAGAAATACGTTAAA AGAATTGATTGTTATTGTCATCATACAAATAACTTGATTTAAGAGCTCTT CTTCATAGTTGTTGCTTTGGAAATCTTGTCTAATACCGCTGAAAGAGTGC TTTTAGATGACAGGAGTCAGATACACAGAGCTTAATATAAACCCTCAGGG GCCGTTTCTCATTCACGACAAACCAAAATCATTTcatgagagcttttttg aaagtgCTACGCTTTTCTTAGCACTGCCTAACAGCGGCGGATAAGGTTTG ATAGATAGCACGGGGTAGTTCAAGATAAAAAGATCTATTCAGACAATCAT TTCTGCTCCTCCGCAAACTGTCACATCTGTTAACGAGCAATAAAACATTG AACTCTCGCTACAGTAATTCGAATTTCTATCATTTCCCATTCGAGCTCTA ATTAGATGTTTATAATAGTAAACTTATACCAAACTCTATCCAAGATTTCC TTCATACATAACTTTCTTACCCAGCTTCATTTTCTGTTACAGATAATTGA CAGATCAGGCGAAGTGAAATCTATCTTCGATCCAGACTCCAAACCACTCC ATACAACACTCATCGTGGTCTTCATTCTTATAGCTGTTTTATCCTGTATT GGtttttttGTTCATCAAATCAGAATCAGAAGAAATAGAGTGGTGCCCGG TAAGTTAAAACTAGCCCTCAGTATCTTTGAGTCTCATTTTAAAACTAATT TGATTTCAACCTCGAGTTCTAGGCCcaggtcagattttccaaaattttac aCCCGTGCACTCTTTCTCGTTTTGGAAGGCTTGGAAAAATGatccttaag ggccgcacgtactaagtcgtttaccttgagtgtccCTCCCCCCGGATTAG GTCGAATGTAAAAGTAAACCTCATGttttagaatgttttttttttgtttg tcagAAATTTGATTAAGTCCTTCATCATGGCAAGAGGGTCCACAGTTAAT TCAGACTTGACTTACTGCAACTCAACTTACTTGGAGACTAGGAACAGTAC ACCATATTTTTTGAAAGACAAGTGGGCTTTCCTTCAATAATCTTTATAAT CAATGGATCTATTATTTTTCGTCTTCCACAGAGTACCTATTGGAATGTTC AAAACAGAAAACCAATCAGGAGCTATCAAAGCACGTTGATGAATTCGTCA CAAATTACCCAAAAATTCTCGAAAGCATTTGCAACCGGTACGAGAAGGAG ATTGTCGGTAGACACGTAAAGCCTCATTTACATTGCCTTCGTCGACGTAA GCGTAGAGTTACACCATCTACACCAAGAGATTCAGAAAACGGTGACGTAG ATGTGGCCCGGGAGAATTTATACGCTATAACACCGTCACAATCAGTATTC ATACGTCACGGCGTTGAATCATTAGACGGAAGTTTCTTTATGACGAGAAA TTCCTTGTTTAACGAAAACGATGATGATGTTTTCGTTGAACGACAAACGA CAAGAACTCCTCGAGAATTTGAACGACCTTTAACGAGTTGGGAAAATCAT GACCCTTGCGCAATAATTGACGAAAACGATCCTTTGGAGGGTCCTGAGGC GCCGGTTACGAGTCGAATTAAAGGTCCAGAGCCAAGAACTCAGAGCCCTG CTTCTATAGTACGTACAAGTAGTAAAAACGTTGATCAGACACCAGACGAT GATGAAGGACTACCAGTTTTGATACATTTtccaaaagacaaaaaagatgt cgaaaaagtcggtggatag

Coding sequence (CDS) from alignment at sc0000001_pilon:885053..900621+

>XLOC_042411 ID=XLOC_042411|Name=XLOC_042411|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4518bp|location=Sequence derived from alignment at sc0000001_pilon:885053..900621+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTACCGAGCATGAAATATACATTAGAAGTTTGTGCTTATAACGCAGT
TGGTAATGGACCATGCGAGAGGCTGACAGTATATACTCTCGACAGCGATG
TTACCGAGCATGAAATATACATTAGAAGTTTGTGCTTATAACGCAGTTGG
TAATGGACCATGCGAGAGGCTGACAGTATATACTCTCGACAGCGctCCCA
CTTCACCTCCATTAAACGTTCAagtaaaaacagaaaaaacacatGACAGC
CTTACCATCACATGGGATCACCCAccacaaaacaaaatacacgGAACATT
ACTGACATACAAAATCACTGCAGAATCACTGTCAAAAGCGAATGTCAATC
ATGACCTTGCAATTGTACATAATGTTATCTCAGTACATGGATCCTTAACA
GAGGCAACTATTGATGGATTACAAACTTTTAACGAATACAGACTTACAAT
ACAAGCAGTCAACCAGTACGGTGAAGGAGTGTCTACTTCAGTTACTGCAG
ctCCCACTTCACCTCCATTAAACGTTCAagtaaaaacagaaaaaacacat
GACAGCCTTACCATCACATGGGATCACCCAccacaaaacaaaatacacgG
AACATTACTGACATACAAAATCACTGCAGAATCACTGTCAAAAGCGAATG
TCAATCATGACCTTGCAATTGTACATAATGTTATCTCAGTACATGGATCC
TTAACAGAGGCAACTATTGATGGATTACAAACTTTTAACGAATACAGACT
TACAATACAAGCAGTCAACCAGTACGGTGAAGGAGTGTCTACTTCAGTTA
CTGCAGAAACCTGTCGATGTCCTGAACTCATCTCCACCAATTATTTTGTC
CTCAAGCCTTACTTATACCGCGATACCGATGGTGAATTAAACGGTCTCTT
CCCGAAAGTTCTAAACGAGATGGTACAAGCTGCCTGTGGACAATGTACTC
GCCCTCAAAATGCATTAGATAGTATACTAGATAAGGAGAAAACTGGCCGA
GGAGGTTTAGCACAGAAGGCCACTGCAAAAGAAGCTATTCAAGATATAGA
CCAGTATACAGAACTCACTTTTCCGGTAGCAGCACATGATCAAATGTCTG
AATTCATGGAAACCTGTCGATGTCCTGAACTCATCTCCACCAATTATTTT
GTCCTCAAGCCTTACTTATACCGCGATACCGATGGTGAATTAAACGGTCT
CTTCCCGAAAGTTCTAAACGAGATGGTACAAGCTGCCTGTGGACAATGTA
CTCGCCCTCAAAATGCATTAGATAGTATACTAGATAAGGAGAAAACTGGC
CGAGGAGGTTTAGCACAGAAGGCCACTGCAAAAGAAGCTATTCAAGATAT
AGACCAGTATACAGAACTCACTTTTCCGGTAGCAGCACATGATCAAATGT
CTGAATTCATGGGGTACAAATTTATTTCATTGGTACATCACCCTGGAATC
GCAGTCGTCGTCAAGGTTATGACTATAAATGACATGATCGAAACACTGAT
TGGAGATATGTTGAAAATATGGCCcatctttttgttaaatttcttattta
tgGTCATTGTTGGATTCTTGGTTTGGATAATGGGTACAAATTTATTTCAT
TGGTACATCACCCTGGAATCGCAGTCGTCGTCAAGGTTATGACTATAAAT
GACATGATCGAAACACTGATTGGAGATATGTTGAAAATATGGCCcatctt
tttgttaaatttcttatttatgGTCATTGTTGGATTCTTGGTTTGGATAA
TGGAAAACCCACGTCTTTATAACGAGGGAGATTTTTCCACCGGTGCATTG
CGTGGTATCTTTGAAGGCTGGTATTGGGCTTTTGTAACTCAAGGTAGTCA
AGGGAAAACCCACGTCTTTATAACGAGGGAGATTTTTCCACCGGTGCATT
GCGTGGTATCTTTGAAGGCTGGTATTGGGCTTTTGTAACTCAAGGTAGTC
AAGGATTTGGTGATTTCATCCCACGTCGTATTCAATCACGCGTTCTGGCC
ATGGTCTGGTCATTAATCGGTATTATCATGAACTCACTGATTGTTGGATC
ACTCGTCACTACTCTTATGTCTCTCAATATTCAAAAGGATGTCAAGCTAT
ATGGCACTAAGATTTGGTGATTTCATCCCACGTCGTATTCAATCACGCGT
TCTGGCCATGGTCTGGTCATTAATCGGTATTATCATGAACTCACTGATTG
TTGGATCACTCGTCACTACTCTTATGTCTCTCAATATTCAAAAGGATGTC
AAGCTATATGGCACTAAGGTGGCCGTAATGAAAGATTCCATTGAAGAAAA
TACGGCAGTTCGTCGTAATGCAGAACCGGTGCCTAGTGGCCGTAATGAAA
GATTCCATTGAAGAAAATACGGCAGTTCGTCGTAATGCAGAACCGGTGCC
TAAACTATCGATCGAGGAGATGAAAAGGGCCTTATTGAATGGTGATGTCG
ACGCAATGCTTATGGATGTGTATACACTAGCAGAATACCCTGAAATTACA
TCTAGCTCTGAATTTGATGTTAAAGAAATTATACATAACTATCGATCGAG
GAGATGAAAAGGGCCTTATTGAATGGTGATGTCGACGCAATGCTTATGGA
TGTGTATACACTAGCAGAATACCCTGAAATTACATCTAGCTCTGAATTTG
ATGTTAAAGAAATTATACATGCACGAAAAGCGTACGGATTTGTGTTAGCA
GGTGCATTGGAGAATGTGGCGAGCGCTGTCGATGTTTACATCAAGAGCAA
TGAAGATCGAATCCTCAATATCATTTCTAACCAGACCAAACCACTTACTG
CACGAAAAGCGTACGGATTTGTGTTAGCAGGTGCATTGGAGAATGTGGCG
AGCGCTGTCGATGTTTACATCAAGAGCAATGAAGATCGAATCCTCAATAT
CATTTCTAACCAGACCAAACCACTTACTATAATTGACAGATCAGGCGAAG
TGAAATCTATCTTCGATCCAGACTCCAAACCACTCCATACAACACTCATC
GTGGTCTTCATTCTTATAGCTGTTTTATCCTGTATTGGtttttttGTTCA
TCAAATCAGAATCAGAAGAAATAGAGTGGTGCCCGATAATTGACAGATCA
GGCGAAGTGAAATCTATCTTCGATCCAGACTCCAAACCACTCCATACAAC
ACTCATCGTGGTCTTCATTCTTATAGCTGTTTTATCCTGTATTGGttttt
ttGTTCATCAAATCAGAATCAGAAGAAATAGAGTGGTGCCCGAGTACCTA
TTGGAATGTTCAAAACAGAAAACCAATCAGGAGCTATCAAAGCACGTTGA
TGAATTCGTCACAAATTACCCAAAAATTCTCGAAAGCATTTGCAACCGGT
ACGAGAAGGAGATTGTCGGTAGACACGTAAAGCCTCATTTACATTGCCTT
CGTCGACGTAAGCGTAGAGTTACACCATCTACACCAAGAGATTCAGAAAA
CGGTGACGTAGATGTGGCCCGGGAGAATTTATACGCTATAACACCGTCAC
AATCAGTATTCATACGTCACGGCGTTGAATCATTAGACGGAAGTTTCTTT
ATGACGAGAAATTCCTTGTTTAACGAAAACGATGATGATGTTTTCGTTGA
ACGACAAACGACAAGAACTCCTCGAGAATTTGAACGACCTTTAACGAGTT
GGGAAAATCATGACCCTTGCGCAATAATTGACGAAAACGATCCTTTGGAG
GGTCCTGAGGCGCCGGTTACGAGTCGAATTAAAGGTCCAGAGCCAAGAAC
TCAGAGCCCTGCTTCTATAGTACGTACAAGTAGTAAAAACGTTGATCAGA
CACCAGACGATGATGAAGGACTACCAGTTTTGATACATTTtccaaaagac
aaaaaagatgtcgaaaaagtcggtggatagAGTACCTATTGGAATGTTCA
AAACAGAAAACCAATCAGGAGCTATCAAAGCACGTTGATGAATTCGTCAC
AAATTACCCAAAAATTCTCGAAAGCATTTGCAACCGGTACGAGAAGGAGA
TTGTCGGTAGACACGTAAAGCCTCATTTACATTGCCTTCGTCGACGTAAG
CGTAGAGTTACACCATCTACACCAAGAGATTCAGAAAACGGTGACGTAGA
TGTGGCCCGGGAGAATTTATACGCTATAACACCGTCACAATCAGTATTCA
TACGTCACGGCGTTGAATCATTAGACGGAAGTTTCTTTATGACGAGAAAT
TCCTTGTTTAACGAAAACGATGATGATGTTTTCGTTGAACGACAAACGAC
AAGAACTCCTCGAGAATTTGAACGACCTTTAACGAGTTGGGAAAATCATG
ACCCTTGCGCAATAATTGACGAAAACGATCCTTTGGAGGGTCCTGAGGCG
CCGGTTACGAGTCGAATTAAAGGTCCAGAGCCAAGAACTCAGAGCCCTGC
TTCTATAGTACGTACAAGTAGTAAAAACGTTGATCAGACACCAGACGATG
ATGAAGGACTACCAGTTTTGATACATTTtccaaaagacaaaaaagatgtc
gaaaaagtcggtggatag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_042411XLOC_042411-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000001_pilongenomesc0000001_pilon:885053..900621 +
Properties
Property NameValue
Aaloc1624-2259:14934
Aaloc1465-1620:14343
Aaloc1336-1464:13608
Aaloc1204-1335:12859
Aaloc1135-1200:12243
Aaloc979-1134:4152
Aaloc877-975:2788
Aaloc709-876:2341
Aaloc406-705:1232
Aaloc100-402:567
Aaloc1-96:1