|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:986305..990087+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042409 ID=XLOC_042409|Name=XLOC_042409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3783bp|location=Sequence derived from alignment at sc0000001_pilon:986305..990087+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAATGCCATCAAACAGTGACTACAAAATCTCACCATTGCATCTCTC
AGAAAGGTATGTTGGCTCATTTTCCACCACATTTTTTCCACCATCCCTCA
GCACTTGATTCTTTTGAGTTCCTATATAATCATTACATAAGGAAATAACT
GATATAACTTTTTCTCCGATGATATTGAAGAATTTAGTTTGTACTCTTGT
TCCAAATAAACGaggggggggctaattgTctTCTACCTTTTTCACTATAT
TCTTTGTCAGGGAGATTCAAGACTGAGGCTTGACTGATCTTGTTTTTTCG
TGATTTAGCGATAAAGatcttataaatatttttttaacaagtttattTCA
AAGTGCATTTTCTATGTCATTTTTGGAAATCTGAGGCtagaattgttctt
aaattagTTCTTAGGTTTTGATAGAGCGGCTAAGGTATTGGCTAAGATTG
AGCCTCATGTTTGttttaaattgcttaaaaaGAGAGTATAGTGGAGTACG
CTTTTAAGATATTCCTTTTCATGATACAAGAAAGAGACGCGCCTATGTAA
GAAATGGTTGGGGATACGTTAAATTTTGtcctttgaaaaatattcaccTA
CTTCTACGGTAACTTAAATTCAAGTAATCAAATTGTCTATCTTGTTTAAA
ATCCATGAGCCTTTTCTACTATCTCGAATTAGAAAGATCatatctttttt
caatattCTCATAGCTTGCAAACAGCTTTGGAGGCGATTCAACTTGCACA
ACAAGATGCTAATACACTTGCAGGTTTCAACAACAGTCGCCAACAAAGGC
GCCGTGCCAGTCTACCAGCTGAGCCGCTCCTCGGTGCACTCAAACGCACC
CTGAGCCACAAGCGATTCCCACATCTAAATTCTACTAAGAGTATACCGTT
TGGGTTTTCACCAAGTTCTAAACAGAGCTCAAACTTGCCACACCTTCACT
GGAGCCGTTCGCATTGTGTGCTACCCCATTTACCAGGGACTTCAAAGCAT
CGCTCAGCACGTCGAGGAAGTTTACCAGCCGACTTTAAATTCATGAATGA
AGACTTTACTATTAAGGAAGGAAGGTAACAACTAAAACGGATTGGGTTCT
ATAtccatattttatttttttttctatttggttgagttgcaggaggcttc
gAGGCCCATTTTTACATCTATAAATGCTTTCAATGAGcaccccgtcagca
ccttggactgactagcCAACCGTTATTTTCTAAAGCGGATTTTTCTGCGA
CTCtattttggtaacaaaaactaCTGAACGATAGATTAGAGCATTTTTCA
TGCCGATAATAGTTTACCTTGGTATTTAAGCCAGCTACAAcagtgttttt
gatttttaaaacacGCATAGAGTACAGTGGAGTCCCttcaactcgaacct
ctataattcgaatgtctccttaactcgaacaagttttacaAATTCCTTTA
ACTTGAATAAATTTGTGTTTCCCGTGCGTGTATGGGAAAATTCTCCAAGA
AATTCTAATCTACCACCGCCACAGTAAACTTTATCTGGCAATTCTCATTG
TCATAGGCTGTATACAGTGTTGCAACTAGCTCCGGGTAATCTAGACGAAA
ATGTGTCTATGAGGATTTTAATTTTATGAAATCTCTGATCTCAAGGCTTA
TTATTAGGACTTTAATCTATATTAGAAAATTCAAATGGGACGGACTTTCG
TTTAAAGACGGAAAAGTATAAGCGGTTTAGTAGCCCGACCTTCGGattat
ttttgcctaagtgccaaCAACATGTGCATATGAAGACGAATATCTTACAT
CAGTTTCAACGCACCGTTGGTTGCCCTTTTAGACTTTGTCAGGGAAACCT
aaaaaaaGCTATTTTAATGGCTTAAATTTTGTGTGTCTTTCATTTAttca
aatataaatttttaaatcCATTAAGACACCTACTCAAAATGAACAATTCC
ATttaatatccatacagggggggggggggggaacaAAAGTTGCCAggggg
ggCTGTCACTTTAAAAATTATCCAAGggctttttgtaaattttgctattt
tccagggggtatccacgcATTTCCAAGAATggttgacttgaaaaggttcg
tccaaccCCCTGTATAGAAATTTAATCGAATGGTCCAATGTCACCTAGAA
AatattcgaaataaaaaatttcatgtaCGTCTCATTCTCGAATTTCGAAC
AGGCACGGTACCATCAATAAGCATTTTAATTCTCTTTCAGACTGAACGAG
GGTCGAAAACGAAGAGGTAGCTACCCCTTAACCGAAGAAATGATGAAACA
ACGAGACCATCTTCATCGCTGCAAAGCTATCCATAAAGCTAATATTACAC
TTCATGATCTTATAAAAGAATGGAAAAACGTCCATCCTACAGCTGTTAAA
CGTGTGAAATCGGAACCCTTCAATCCTAATACTAAAGATAAAGGTAATTA
TAATTACAGTTGATgctttctaattcgacgttttactattcgataggctc
ccttattcgatgaaatcaagAAACAACTcataagaaactctcataaacga
cgctcccttattcgataagcaaAATGtgttcgatgaaaatccaattcccc
ttgaagatcgaattagagagcgtcaaagATAATTATAAGCTTCGAATCTC
GCTGAAATATACATGGTGTGAATACGGTCAAcaattctctctaattcgaa
atctctatttttcgaattttttcataattcgaagaaagaaatttgtcccc
tcagtaatgggcttttccagaaatagtccgtacCCCCCTGTTGAGgttat
cggatatccagggggttaacgatttttgttcgaaaatggatatccagggg
gttaaatatctacaagtgagcggatatccagggggtaaagtgtcttttca
aataaaaaatacgatattcaggggtaagcatctttataagagaggatatc
cagagggttgagcatatttttaagagtgggtATCCAgagggtctttacta
ataaagtaggatatccagggggttcgatacttcgaaaaatcaatatccgc
AACAGTGgaggtgaattttttttctggaaaagcccaatccgaatatttct
ctaatttgaGGTGTGGTCCTGGTCCTAATTAGGAGATCGAAATGGAGAGA
GTCAACTTCATCACCCCGTACACCCCGTACACTTGAGAAGGCAGACGGCC
TTCTTTAAAATTACAGACTCTCCCTCCACTTAGAAAATTggaactttcaa
aactttcgaaaataaGAGTATGACTATGAGGTACAACTATGAACGCGATG
AGCAAAACGAAACATGTTTTACGTGACCTTTAATAAGACGAAAACCTTTC
ATTAAACCCTTTAAAGTTTTACCAAGTTTGGTACTCGGCTGGATTCCGTA
ATTCAAGGGATTTTGTTTTGTTAAGGCTGGCGAATGAAAGATTAACACCG
ACGAATTCGTAGCGAGcccagtgtattgattagcggGAATATTTACTTGA
GGCGGTGAACCGAAATCTTAGAATTGtattttttcgtgccttggaccGGT
GAAATTCGCCGTTCAACGGGCCTGAGTTAGATCCCTGGTCATTATATTTA
GTTTAATAATTCTCATGCATTTTCAATTTAGATTACGACGAAACGAAATT
AGCGCGTACCATCTCCATGACAGCGGATTTcataaacaaagaaattgctc
cttcaaaaaatcttatacACATTCATTTCATCGACTCAAAGACTGTAACA
CCTTTTTCAGGACACGCTATCGCCGCTaaatag Coding sequence (CDS) from alignment at sc0000001_pilon:986305..990087+ >XLOC_042409 ID=XLOC_042409|Name=XLOC_042409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1542bp|location=Sequence derived from alignment at sc0000001_pilon:986305..990087+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAATGCCATCAAACAGTGACTACAAAATCTCACCATTGCATCTCTC
AGAAAGATGAAAATGCCATCAAACAGTGACTACAAAATCTCACCATTGCA
TCTCTCAGAAAGCTTGCAAACAGCTTTGGAGGCGATTCAACTTGCACAAC
AAGATGCTAATACACTTGCAGGTTTCAACAACAGTCGCCAACAAAGGCGC
CGTGCCAGTCTACCAGCTGAGCCGCTCCTCGGTGCACTCAAACGCACCCT
GAGCCACAAGCGATTCCCACATCTAAATTCTACTAAGAGTATACCGTTTG
GGTTTTCACCAAGTTCTAAACAGAGCTCAAACTTGCCACACCTTCACTGG
AGCCGTTCGCATTGTGTGCTACCCCATTTACCAGGGACTTCAAAGCATCG
CTCAGCACGTCGAGGAAGTTTACCAGCCGACTTTAAATTCATGAATGAAG
ACTTTACTATTAAGGAAGGAAGCTTGCAAACAGCTTTGGAGGCGATTCAA
CTTGCACAACAAGATGCTAATACACTTGCAGGTTTCAACAACAGTCGCCA
ACAAAGGCGCCGTGCCAGTCTACCAGCTGAGCCGCTCCTCGGTGCACTCA
AACGCACCCTGAGCCACAAGCGATTCCCACATCTAAATTCTACTAAGAGT
ATACCGTTTGGGTTTTCACCAAGTTCTAAACAGAGCTCAAACTTGCCACA
CCTTCACTGGAGCCGTTCGCATTGTGTGCTACCCCATTTACCAGGGACTT
CAAAGCATCGCTCAGCACGTCGAGGAAGTTTACCAGCCGACTTTAAATTC
ATGAATGAAGACTTTACTATTAAGGAAGGAAGACTGAACGAGGGTCGAAA
ACGAAGAGGTAGCTACCCCTTAACCGAAGAAATGATGAAACAACGAGACC
ATCTTCATCGCTGCAAAGCTATCCATAAAGCTAATATTACACTTCATGAT
CTTATAAAAGAATGGAAAAACGTCCATCCTACAGCTGTTAAACGTGTGAA
ATCGGAACCCTTCAATCCTAATACTAAAGATAAAGACTGAACGAGGGTCG
AAAACGAAGAGGTAGCTACCCCTTAACCGAAGAAATGATGAAACAACGAG
ACCATCTTCATCGCTGCAAAGCTATCCATAAAGCTAATATTACACTTCAT
GATCTTATAAAAGAATGGAAAAACGTCCATCCTACAGCTGTTAAACGTGT
GAAATCGGAACCCTTCAATCCTAATACTAAAGATAAAGATTACGACGAAA
CGAAATTAGCGCGTACCATCTCCATGACAGCGGATTTcataaacaaagaa
attgctccttcaaaaaatcttatacACATTCATTTCATCGACTCAAAGAC
TGTAACACCTTTTTCAGGACACGCTATCGCCGCTaaatagATTACGACGA
AACGAAATTAGCGCGTACCATCTCCATGACAGCGGATTTcataaacaaag
aaattgctccttcaaaaaatcttatacACATTCATTTCATCGACTCAAAG
ACTGTAACACCTTTTTCAGGACACGCTATCGCCGCTaaatag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:986305..990087 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 622-771:3634 |
| Aaloc | 418-618:2242 |
| Aaloc | 58-414:716 |
| Aaloc | 1-54:1 |
|
