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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1010617..1015428+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042408 ID=XLOC_042408|Name=XLOC_042408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4812bp|location=Sequence derived from alignment at sc0000001_pilon:1010617..1015428+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATGTT
GGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTGTG
TTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAGAA
AAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTTGA
GAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAATG
AGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCggca
aaagaagaagaagaaacaaagaGTAAACAATGTCAAAGCCAGATAACTAC
CTTCCAGCGATTCTATTCTGCAGTGAAGGTTAGTTTTTATCTTTGTAtat
atccagacgatctcaatcgaaccagtcgaaccaaatcgaacgcaatcgac
cgattgaaattctattgtcaaACGCgttcgaatctcaatcgaaaattacc
acaattttcagattcgattgctgatattcgattgcattcgattgctgata
ttcgattgcattcgattgatgttcgattgcattcgattgatgttcgattg
cattctattAGgatccgacccttagagagactaatctTTGTTAAAAAGCT
GAcccttttcgaaatcctctcgttgattcgattcttttgagctatatata
tGAGAGTTAATTAaggaataatgggaagcggtgcgcgtcacgcaaaatat
atttgggacatgccttgtttcacccgaacAATTGAATGCAGTCGAATGAC
AATCAAACCAGTCGAATAACAATCGAACCAAGTGAATATTACTCAGAatt
ttgacaatcgaatttcaatcggtcgattgcgttcgatttggttcgactgg
ttccatcgtcgattccgttcgattccgttcgattgagatcgtctggatat
aATATTGTGAATTTTAAGAGCGAACTATATTCAAAATAGACACTTTGAAA
ATATCATGATGGCCATCCAAAGAAGGATCTTGAATCAATTAAGGggacta
ccgtcaactgctctaactttgaactatctgacaaaacatgggacagcatg
atgcaattcggccaccatcagtcacggggtgtgcatttgcaacggTTTCA
ACGATTTTTTCCAACATTGTGCACATAAGCTAGAACGTGTAAGGCAAAAT
GCGCTAAAATTAACAAATctcaactttaaaatgaaaattggcATAAAACG
AAGACGaatggcattttcattttctctttagaaGATTCTTTAGCCTTTTT
AGAAAGTGTTTGTCTGCGGGTTAAAACTTTGATctgtgcatttttttata
atcaagtgTAACATTTTTCCACTCTGTGTAGATGCAACGGGTTGCAGTGA
TCGAGTGTATTTGCACAGGGTTTTTTCGTCACTTTGGTTTTCGACCCGTT
GCATTTGCCGCATGTCgaaccctgtgcaaatgcaaggatttccgtgacTG
ACCATTTCacagaacctccaaagtcatttgatttgagttaatgaacggcg
ttttaaaaaatacacgatttctctttcgcaccgagtaaaTTTTAGCAAGA
CAGTAATTATTTTAATCTTGGGGAGGACTGATTTTGGCCAATTCGTTAAa
acatttaagattttaaaaaataggtgaaaatgaaaatgtccaAGGAGGGC
ATTATGTCACTCTCCTTTGACTCCTGGGATAATATCAAGAAGGtcgtttc
tttttcatttatttgcaTAAGTCTAAAAGAGTTAACTTCACAAATAGAAT
CACTGATCATTACTTCACAGTCATGGaggaactttttttttcagaatctc
TGTGAATGACATGATAAGGGGGTTGCTGACATAAGAGCAATTTACAGTAT
agtttttgaacaaaataagaaGTATTTTCCCTGAAAATCACTCACATTGG
CACTGTGGTATAATAGTGGTCTTGACTTAGGTcactgcacaggcgactga
ttCGATTCCCACTTGCAGTAgatcacttggcaagtgaatgaacttttgaa
cttttgcccgggtcaacccgtaccatgtgaggggaattgggtagtcagtc
ctaggtgctgacgggacgctcatagAAAGCAGCTATAGTGGCGAAAATAG
GcttcaaagcctcctgcaactcaaccatatagaaatagaaattgtgGCCG
AGTTAGAAGGAGGCTGTGAAAAAGACCtgatttttttggacctaccccgg
tggggtggaagTCCTATAATTTAACCtttgtctgttcgttcgtccgttcg
ttattagctttcctagtgattggctcgttagttttttctgattttttgca
caaagatgtgtaacgaTAAACCCTCGAATATTACtaagcctgattttcga
aaaaaattgttgggcaaatttgggtcaaaaaacggctaaaaaacagatca
ttaactttttctgattttttgcatgaaagtagggtaccatcatggtaaaa
gatggctcaagcagattttttcaaaaaagttttgttggctcaaaaaacgc
atgtttatctataagaatcactattaataggcattcatcaatgttcttag
ccaaattactcaattttttgatgagatagatattttttttgctcacaaag
tcttaaaatatgaaagaatatttcaagagcatgaaatttttgtttctaaa
cgtttttttttataagaaacaaacgactaattttaatagatcgtcactat
ttgtgttctgaatgattgtttaatggtcacgctcacgtagatatcaatta
cataaaaattaagaaacgttgtatttcttttcaatataatcaactgatga
atgcgtaagcaagaaactttaagtattgaaaagaaatacaacgtttctta
atttttatgtATCAAGCTCTACTTATGTATCGAGCACTCCTAATTGATAC
CTACTTCTTGTGTTTCTCTGCACAATTAAGAGTGCTCGATACATAAGTag
atatgtgttaaatgcataacctgttaggtccataaaagtatcacttgtta
atcCTGGATTAGTTTATTAAATCGATTTCAATCAGTTACGAATTTCAATT
TGTTTGACTATGGGATGACCTATTGAATGCAATCTGAATAATTAATGACC
TCCTTCTGCCAGGAATTATTCATTCcgacaaaaagtttttctctgTAACA
CagtatcattatttttttgtttttttaggaaaaactaaATCATGGAGAAA
ATGGGGAAGTAACAGCCACAGTTGACACAAAATCAGATTTGGATAACACT
ATAGATGGTATCGTTAAATTAAACGGTAAAATGTCTTGCATGATATCTAT
TATATTAACtgattgaaattgattttttatgattctCGGGGGTAGGTTAT
ATACCAGGATTGTCAGATGACGGGTATGGccaaaaaagttagaaaatcgA
TCCTtacttagagagactgaatttgaaaatgttgtctatctttgactttt
ttgtcacccttagagagacatttCCCCGAAATTCCAgccaatgtttttaa
attttagtccaaattcaagaatttattcaattgagtcaattttttatttt
cgtaaatttggaaccctcaatttgcttttttatggttttttgcCTCGAGG
GACTtttgagggtgtgaaaaagggacccttggCTCACACATACCTCCATC
CCAATcagtaaatatttttcagaaaatagtaCTTTACTTATAAATATTGT
TTTAATGTTTCTAAAGTCTTATTGCATATTTAACTTAAAGTATTCATAAT
TATAGCCAAAATCTCTAAACTTGAGGAAGATCAATCAAAATGTTCTGAAG
TTGAGAAGGAGTTTGAGGAATTGAAACgatctactgaaacaacaaattCT
CAGATCAAAGCACTTGCGACAGAAAAGTAagctgatgtttttatttttag
taaattttggtgaaaagaaACGTGCATTGTGAAGAATTGTTGAAAACAAG
CATCTTTACTATTCAACTAAGTTGCTGAAAGGGAAAATTGCATAGTAAAG
TATCTATTTTAAAATTGATTCCAAATTAACTATTTATTTATAATTACCTA
CATTTATCATAGGGAAGCACTAAATGacgaattgaaaaatgttcgaaaat
TGTTGGAAGAAGCtaatgcaaaaatttcaaatttcgacGACCGTGAGTTC
TTctaaatcattttttaattttttattcagaTTAAACTGTCTTCAAGCCA
TGAAACTACATGGAATGAACGATCAGGATTTAATATTGATTGTCTagttt
aagaccatgttcagatgtAACGGAATCGTATATGGTTTCCGTATTTCCGG
TATGGTttccgttacggatcgagagtgttcatattggtttcagaacgttt
cggagcaagaaaacggagcaattccattccgatgaaaaaagtggagcaaa
ACCGTTTTTTATCCGTTTTGCTTTGTTTCTTCATTGACGTTTCCGATTTT
GACGTTCACATTGTTTCGAAACTGTTTTGTTCTAGAACTATATGGAACCG
TAACGCCTGAATATGATCTTAGAAGGCTTACTTTGTAATGATTTATTCGT
GAGCTCAACGTTTGCTTGAAGTGGCTCCTCTCAAGTGGAATATAGCGTTC
CCAATGTCTTCCATTATTATATTCTTCCATGCAATATTAAAGTATAGAAt
gataatatattattattctCTATTTTCAGATCAACATAAAAGAAGTTttc
aaaggaagaaaattcCTGAACAGGATAGAAATGTAAAAGAGGAGATTCtt
aatgaaaagaaa Coding sequence (CDS) from alignment at sc0000001_pilon:1010617..1015428+ >XLOC_042408 ID=XLOC_042408|Name=XLOC_042408|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1518bp|location=Sequence derived from alignment at sc0000001_pilon:1010617..1015428+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATGGATTTAAGCAGAAAAGGAGCGAGCGGTGAAAGGAAAATGTT
GGGTATTCCGATTGTTTCATTAGCAGTTATAGCTGCTGTATTCATGTGTG
TTGTTTATTATGCTTCTGGATATGCTTCTGAAAACACTAAATTAATAGAA
AAATATGGAATTGCTAGGACAAAAATTTTGAGCCTTTCCAGAATGGTTGA
GAAAATGAGCTCAAATCAAAAGATATGTCAAAGCAACCTTGGTCAAAATG
AGCAATCAAATAAAGAGCTTACTCTGCAAGTTAGCCGTTGCAAATCggca
aaagaagaagaagaaacaaagaGTAAACAATGTCAAAGCCAGATAACTAC
CTTCCAGCGATTCTATTCTGCAGTGAAGATGGCAATGGATTTAAGCAGAA
AAGGAGCGAGCGGTGAAAGGAAAATGTTGGGTATTCCGATTGTTTCATTA
GCAGTTATAGCTGCTGTATTCATGTGTGTTGTTTATTATGCTTCTGGATA
TGCTTCTGAAAACACTAAATTAATAGAAAAATATGGAATTGCTAGGACAA
AAATTTTGAGCCTTTCCAGAATGGTTGAGAAAATGAGCTCAAATCAAAAG
ATATGTCAAAGCAACCTTGGTCAAAATGAGCAATCAAATAAAGAGCTTAC
TCTGCAAGTTAGCCGTTGCAAATCggcaaaagaagaagaagaaacaaaga
GTAAACAATGTCAAAGCCAGATAACTACCTTCCAGCGATTCTATTCTGCA
GTGAAGgaaaaactaaATCATGGAGAAAATGGGGAAGTAACAGCCACAGT
TGACACAAAATCAGATTTGGATAACACTATAGATGGTATCGTTAAATTAA
ACGgaaaaactaaATCATGGAGAAAATGGGGAAGTAACAGCCACAGTTGA
CACAAAATCAGATTTGGATAACACTATAGATGGTATCGTTAAATTAAACG
CCAAAATCTCTAAACTTGAGGAAGATCAATCAAAATGTTCTGAAGTTGAG
AAGGAGTTTGAGGAATTGAAACgatctactgaaacaacaaattCTCAGAT
CAAAGCACTTGCGACAGAAAACCAAAATCTCTAAACTTGAGGAAGATCAA
TCAAAATGTTCTGAAGTTGAGAAGGAGTTTGAGGAATTGAAACgatctac
tgaaacaacaaattCTCAGATCAAAGCACTTGCGACAGAAAAGGAAGCAC
TAAATGacgaattgaaaaatgttcgaaaatTGTTGGAAGAAGCtaatgca
aaaatttcaaatttcgacGACCGGAAGCACTAAATGacgaattgaaaaat
gttcgaaaatTGTTGGAAGAAGCtaatgcaaaaatttcaaatttcgacGA
CCATCAACATAAAAGAAGTTttcaaaggaagaaaattcCTGAACAGGATA
GAAATGTAAAAGAGGAGATTCttaatgaaaagaaaATCAACATAAAAGAA
GTTttcaaaggaagaaaattcCTGAACAGGATAGAAATGTAAAAGAGGAG
ATTCttaatgaaaagaaa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1010617..1015428 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 679-759:4732 |
| Aaloc | 598-675:4114 |
| Aaloc | 478-594:3808 |
| Aaloc | 379-474:3229 |
| Aaloc | 1-378:1 |
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