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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000001_pilon:1018677..1023754+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042407 ID=XLOC_042407|Name=XLOC_042407|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5078bp|location=Sequence derived from alignment at sc0000001_pilon:1018677..1023754+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCACGATTCAGCTTACAGGAAAGTCAGAAGTATTTCTGAAGGAAA
CTTTCACAGCTGTTATGCTTCAAATAAAgcagagaaattcaaattcaaac
ggCTTTCGCAAGGTCTCGAAAGTTGTGCTCAAGCACAAACGATGAAGCTT
CGGAAAGAGGAAAAAGAGTTGACGAAACTTTACCAAAACATTCAGAAAGA
AAAGATGAAACATGAAATCGAACAAAGACATAATCAATTCTATCTgaaga
attctcaaaaaaagcATGGCAAAGAAAACCAACAGTTGAACTCATCGATG
TCAAGCTTGAAAAGGTTACCGTCTATTCCGTCTAACCCACGACACAAATC
ACAACCATCAACTGGTATGAAAGAATTTTCTACCTACAAAAAACTAAATC
CTATTCTTTGTTGATAACCCGAAAATTTCTAGCAACCCTTAGGACAGGTA
GATCACTTCCAATAAACAGAAAAAGGAGAGATGAAAGGGCCCATGAAAAG
gagactttttttttatttgggatttttaatttcttggatttctgagtttt
tttcactatttcaagattttctggattttACGGAAACAAATACGAAATTA
GGAgacttggattttttttctttgactttttttgagcaaattagtaaaat
ttcatCTTCTTGTCCCACTCAAAGCTGACAAACGAAACAGACGATGTTCA
TTACAACCTAAACTGTCACCTAGCAATGAAGTGATCCCTTTTTACATGCA
ACACGGTTATTCACATTATCACCATGATCCTCATTATGATCACCTGCTGG
AtggagaaagaaaatcaaaacaggtATCGGAGCTACAGTTGACAATCTCT
AAACGCTCCACTATTATTCGATACGGAAAGATTTagttttaatagacctt
ttcataaattacgttacgaacatcacttgcctcgttttgaagttattgcc
atggtgattaactcctagcggattttattaaaactacattctattcataa
aaaaatcatttaatgtctcaaaggGACAtaataatcaccatggtaattgt
atgaatacgaggcaagtgatgttcgtgatgtagtttatgaaaaggtctat
caccGATTCCAATTCTCCTCTTTTTCCGTATTTCATACTGTATCTCAAAC
TCTGTCTTTTCTGGGCTTAGTTTTCTCTGAAGCTATTTATTTAACTCTGA
AATATACTCCCACACCTCAGTTCGAAACACCAAATACAAGCAACCTGTGT
TTTCCGAAACTAGTTTTCACCTTCTCatttaccctgagtatcagaggtta
agttttcaaagaaaatagtaacctctgaagacaaatgatagaaattttat
cgcgcatgtgtcaatctaatcactgtagaaaaaatcaaagatgaagagta
aATATTAACCATAtcaatgtctagcagactgtatcagtatgcagtttact
atttacgaattccccagaaacctccaagtgtagttgaaatgagtttattt
cgaaagaaatcttttacatgatccccaaatgtataacagtaattactaaa
cttttaattatggaaatgtcactttaattgagtCGAAATAatatagacag
actttatgttatgattctctatcactgactctttttacaaagcattgatg
actttttgtaagttgtgttttcaacgacgggaataaaaatatcgactatg
acgctcatccaagatcttggatggtcgtcatggttacttttgtctccGCT
GATTGCGCAATGAATAGAATCttgattcgtcggcacagcgtaaatatatg
atattgagctgtgcttttcacggtacttcTCATTCGATACGCTCCTATTA
TTCGAAAATTGGtaatattgaaagtcgccgTTAACGAGAAGTCTTCATTT
AAGCGACGCTCTACCATTCGATGATTTGCTTCCTTATTCTCCCCCTTCAA
AATCGAATGTCAactgtaatttttctttcgtccTTTACTGAGTTGGTATA
GCTAGCTTCGTTGAGAAATGAAGAGAGAAtcttttttcagattcaggaaa
aaaaaaCTACGAGACCCGAATAGAATTCGTATGATTCCTGTggggggggg
gagcagtcaggcaaattgaccaaCGGGTATGTACAGAGGCTAAGGGTACG
AAAATAAATTCACTGTAAgtgtggaaatttcagcaattacagaaaatatt
tcgaattttttgaaaaaaattagaaaattctgatttttttgttctcaaag
agttaaaaattaaaaaataggcACTGTAACCGTATGCATTTCAACGATTT
TTGCTACACTTTAAGAGAATGATtctttctaaaagccaatttttcgCCGC
ACGTATCATTAGTTGTTAAACCCACACAACCTGCCCGGTATGAATCTATT
CTTTCCAGGTTAAGATTTTTAACTACTCCATCACTAGAtttaatttctgt
ttttctcTAGGACCTCTCAGGGGATGACATTGCAACTCTAGACGAACCCT
CTTGGAAACAAAAATCCACAAAACTTGCACGTCTCAAAACACGTCGTAAT
GCAATAACGTCTGTTAATAGTGAACAATTAGCATTTCTTAGAGATCTGGA
AGGGAAACGGAGATCGTCTATCGATAGCAGAATTTCGAATGCTTCGTCGC
GTTATGCGGATCTAGACGATATGAGCTCCATCGATTTGACGCTTTCAATG
AACGTCAACTTACAAAACAATGGAACATCTACGCAACGGCTCCTTTGCGA
TGTTTTGAACAAGGTATAATACACACGGCTCTTTGCAGAAAAAATGAACT
GAAATAATAATTAGATCGGAAACTTTTTAAATCTAAACGTCTGTAATTCG
GATGTCTCCTTGACTCTAAACTTTACTCAATGATTCAAGCAAACTTGTGC
TCATCCTGGGGGTTCGAGTTATAGCGTAGAGACTCGACTTGAGTTTGAAG
CTCCGAAGGGGCtatagagaggaatcttcaacctttctcaagctacaaaa
agtgaagccttaagtttctcccgcatttagaaattttctctGATAAACGG
GTCACGTGTTttggatgagaaataagtggcttcatttcccatccagaagt
ttcggatctacaatcagtgccataacatattggtaATTaggctattttac
catttttcgaaaattgaagttcgagcgagaatgtcaatttcgggccttca
actttttttcatcgaatatttcgattcaatcaagccctactggaccattt
ttgaacttttgtcTTAAGTCAAGCTTTAAaattctacccttccaacctaa
gttagagcgcttccaaattgtttgtgttTATGAAATTTCGTGaagaattt
cccttttgtgccaagtattttggaacTGATTGTAGCGCCTTcagggcttt
gaaatcaatggtatCTACCgtgttttgttttcaatactTTGTTTCCAGAA
TGCGGAATCACAACCACAGCAACAAGGGACTGGGAACAATAGTGTTTTAA
CACCATTCGAACGACAAGAACTGGCCAAATATCAACACCGAAGTGTACGA
ACTGTCACCCCTATGGAAGAAGCGGACAGACGAGCACAACATTTGTTCGA
AAACTCATCCCGTGGACAACGACGTTGTACGCTACCTGTTACTAACACTT
CCAAATTGAACATGCTCAGGCATGTTTTGTTAAAGAAACTGGTCAACGGT
GAAAGCATAAAagtgagaaaataatttttgaaccaTGTTGCAATAAATCA
GTCCCATAGCCTCGTATTTTCAGGTGCCTGTAAACTTTACTATACATTCC
CTAGTAGAGTAATTAAATTTCTCTAAACACACCGTTTATTAGAAACCTGA
GAGTACTTTTAAATAAGTTATCAATTAATTAGATACCATAGCCGACTTAT
AAACAAAGCTGCCAAGAAGCTTCTTTATTCAGGAGTTAGCCCAGATGAAA
GAGGACCCTGAGGTGATCCCCCAGCGTGGCCCTTTGACTAGtaaataagt
aagtaagtatttatttaccatttaccACTACAAAGAAGATACAAGTGACG
atatgcacaaaaaatatatggatggagaccgccttatagtctagctaatc
aaaaagatgcggccaccAAGTACATATTGCATTTATAAACACTGAAAGCA
TGACTGAAAGCATTTAATTTTAGGCACTCGCTATACCTTTTTGGTCAAGT
CTCTATAACTTGAACCCGTACGtggaacgcaaatttgttctagctaagga
aatttcgatttaCGGAGTAagttttataaggcattgttaactggagggac
gagaaaactttttcgagttaagtagacattcgagttgtagaggtttgagt
taaagCAACTCTACTAGTATACGCCTACACTGGCGTCTAGTTAACCAAGC
CCTATAAATCTGATATCATTCTAAATTTAGTCATCGTTGTCACCGAGCCT
TAGGATGATAGGGAAGCCTGAAAACGAGCCCTTTCGTTAGGTCGCTTGCC
TTGAGTGAACCCCTcccccccGGGTTAGGTTCTCGACtcaaagaaataat
tttaacataatttgaagtttcaaattcCAACCCTTTTGTTCTTCAGGTTA
CTGGTGTCTGTGCTCTAGTTTAGACAAcacacttttcgccctgcctattc
taactGTGAAAGTGGACATTAGgactgtctaaagtcaatgcgtTACTTTC
CTTTGACTTTAATGCAATGTCTCTTTCAatattttccaagcaaagaGTTT
AAACTGCCAACTTCTCgcccactttttgcctactTTAAacattagaatag
gcagggtggaaagtcggccgtctaaactagagctatcTTTTGACTTTCAA
TCTTTCCTTCTATTGCAGAACCTTGCAGTTGACAAAACATTCGATGGGCT
TTTAGATGAACTAGACGATGGTCGCATTTATCCAGCCTATGATCCAGAAA
ATGTACTGGAGCTGGAAGATTTTAATGCGTTGCGAAAATGTAAATATCTT
CGTATTTCCGATCTCAACAAACAAAGCTTAAATGAAATTGCTTTAGGTTT
GCTTCTTGTATCTGATAGTAAACATTAG Coding sequence (CDS) from alignment at sc0000001_pilon:1018677..1023754+ >XLOC_042407 ID=XLOC_042407|Name=XLOC_042407|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2580bp|location=Sequence derived from alignment at sc0000001_pilon:1018677..1023754+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTGCACGATTCAGCTTACAGGAAAGTCAGAAGTATTTCTGAAGGAAA
CTTTCACAGCTGTTATGCTTCAAATAAAgcagagaaattcaaattcaaac
ggCTTTCGCAAGGTCTCGAAAGTTGTGCTCAAGCACAAACGATGAAGCTT
CGGAAAGAGGAAAAAGAGTTGACGAAACTTTACCAAAACATTCAGAAAGA
AAAGATGAAACATGAAATCGAACAAAGACATAATCAATTCTATCTgaaga
attctcaaaaaaagcATGGCAAAGAAAACCAACAGTTGAACTCATCGATG
TCAAGCTTGAAAAGGTTACCGTCTATTCCGTCTAACCCACGACACAAATC
ACAACCATCAACTGATGCTGCACGATTCAGCTTACAGGAAAGTCAGAAGT
ATTTCTGAAGGAAACTTTCACAGCTGTTATGCTTCAAATAAAgcagagaa
attcaaattcaaacggCTTTCGCAAGGTCTCGAAAGTTGTGCTCAAGCAC
AAACGATGAAGCTTCGGAAAGAGGAAAAAGAGTTGACGAAACTTTACCAA
AACATTCAGAAAGAAAAGATGAAACATGAAATCGAACAAAGACATAATCA
ATTCTATCTgaagaattctcaaaaaaagcATGGCAAAGAAAACCAACAGT
TGAACTCATCGATGTCAAGCTTGAAAAGGTTACCGTCTATTCCGTCTAAC
CCACGACACAAATCACAACCATCAACTGCTGACAAACGAAACAGACGATG
TTCATTACAACCTAAACTGTCACCTAGCAATGAAGTGATCCCTTTTTACA
TGCAACACGGTTATTCACATTATCACCATGATCCTCATTATGATCACCTG
CTGGAtggagaaagaaaatcaaaacagCTGACAAACGAAACAGACGATGT
TCATTACAACCTAAACTGTCACCTAGCAATGAAGTGATCCCTTTTTACAT
GCAACACGGTTATTCACATTATCACCATGATCCTCATTATGATCACCTGC
TGGAtggagaaagaaaatcaaaacagGACCTCTCAGGGGATGACATTGCA
ACTCTAGACGAACCCTCTTGGAAACAAAAATCCACAAAACTTGCACGTCT
CAAAACACGTCGTAATGCAATAACGTCTGTTAATAGTGAACAATTAGCAT
TTCTTAGAGATCTGGAAGGGAAACGGAGATCGTCTATCGATAGCAGAATT
TCGAATGCTTCGTCGCGTTATGCGGATCTAGACGATATGAGCTCCATCGA
TTTGACGCTTTCAATGAACGTCAACTTACAAAACAATGGAACATCTACGC
AACGGCTCCTTTGCGATGTTTTGAACAAGGACCTCTCAGGGGATGACATT
GCAACTCTAGACGAACCCTCTTGGAAACAAAAATCCACAAAACTTGCACG
TCTCAAAACACGTCGTAATGCAATAACGTCTGTTAATAGTGAACAATTAG
CATTTCTTAGAGATCTGGAAGGGAAACGGAGATCGTCTATCGATAGCAGA
ATTTCGAATGCTTCGTCGCGTTATGCGGATCTAGACGATATGAGCTCCAT
CGATTTGACGCTTTCAATGAACGTCAACTTACAAAACAATGGAACATCTA
CGCAACGGCTCCTTTGCGATGTTTTGAACAAGAATGCGGAATCACAACCA
CAGCAACAAGGGACTGGGAACAATAGTGTTTTAACACCATTCGAACGACA
AGAACTGGCCAAATATCAACACCGAAGTGTACGAACTGTCACCCCTATGG
AAGAAGCGGACAGACGAGCACAACATTTGTTCGAAAACTCATCCCGTGGA
CAACGACGTTGTACGCTACCTGTTACTAACACTTCCAAATTGAACATGCT
CAGGCATGTTTTGTTAAAGAAACTGGTCAACGGTGAAAGCATAAAaAATG
CGGAATCACAACCACAGCAACAAGGGACTGGGAACAATAGTGTTTTAACA
CCATTCGAACGACAAGAACTGGCCAAATATCAACACCGAAGTGTACGAAC
TGTCACCCCTATGGAAGAAGCGGACAGACGAGCACAACATTTGTTCGAAA
ACTCATCCCGTGGACAACGACGTTGTACGCTACCTGTTACTAACACTTCC
AAATTGAACATGCTCAGGCATGTTTTGTTAAAGAAACTGGTCAACGGTGA
AAGCATAAAaAACCTTGCAGTTGACAAAACATTCGATGGGCTTTTAGATG
AACTAGACGATGGTCGCATTTATCCAGCCTATGATCCAGAAAATGTACTG
GAGCTGGAAGATTTTAATGCGTTGCGAAAATGTAAATATCTTCGTATTTC
CGATCTCAACAAACAAAGCTTAAATGAAATTGCTTTAGGTTTGCTTCTTG
TATCTGATAGTAAACATTAGAACCTTGCAGTTGACAAAACATTCGATGGG
CTTTTAGATGAACTAGACGATGGTCGCATTTATCCAGCCTATGATCCAGA
AAATGTACTGGAGCTGGAAGATTTTAATGCGTTGCGAAAATGTAAATATC
TTCGTATTTCCGATCTCAACAAACAAAGCTTAAATGAAATTGCTTTAGGT
TTGCTTCTTGTATCTGATAGTAAACATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000001_pilon | genome | sc0000001_pilon:1018677..1023754 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1081-1290:4869 |
| Aaloc | 817-1080:3449 |
| Aaloc | 514-816:2461 |
| Aaloc | 367-513:677 |
| Aaloc | 1-363:1 |
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