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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:1159377..1160468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_042404 ID=XLOC_042404|Name=XLOC_042404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1092bp|location=Sequence derived from alignment at sc0000094_pilon:1159377..1160468+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCACTTGAATCAGCCTAATGTGAGTGACTTCGAAACCGAACAATATCA
ATCTACACCGCAACACCAAAATTGTGTCACACAGGCGAATAGACAAAACT
ACGAAATTGGAAATGGTCAACCTTTTACAAACGCACCACTGGATAACGGA
TATCAGAATTGCATACATAACTTTGACTTTAATGGAAATGTATTTTCcaa
ccaacaagagcaacaacaacaacagcaacaacaagaCTACACTATACAGT
CAAATATGCAGCAAGATAATTACGGTACTAGTAACGAATACAACCAAATA
AACTCATTAGACCCGCAATTCATCGACCCACAATTCATTGCACAAACATT
TGGCATCAGTGGTAATGCAAATCACCAATCAAACACACAACAAAACTCAT
TCAACAATTTTAATAATCCCGATATGCAGAACTCGACTAATACTGAAAAT
TTAaactatttttcccatcaaaCGAACCACCAGATTGATAATACCGATAT
GCAGAACTCGACTAATACTGAaaattcaaactatttttcCCAACAAACGA
GCCACCAGATTGATAATCCCAATATGCAGAACTCGACTAATACTGAAAAT
TTAAACTATTCTTCCCAACAAACGAGCCACCAGATTGATAATACCGATAT
GCAGAACTCGACTAATACTGAaaattcaaactatttttcCCAACAAACGA
GCCACCAGATTGATAATCCCAATATGCAGAACTCGACTAATACTGAaaat
tcaaactatttttcCCAACAAACGAGCCACCAGATTGATAATACCGATAT
GCAGAACTCGACTAATACTGAaaattcaaactatttttcCCAACAAACGA
GCCACCAGATTGATAATACCGATATGCAGAACTCGACTAATACTGAAAAT
TTAAACTGTTTTTCCCATCAAACGAGCCACCAGATTGATAATCCCAATAT
GCAGAACTTGCCTAATACTGAAAATTCAAACTATTCTTCCCAACAAATTA
TCCAATACAAGGATAATATCTCTTCTCAAAACTCCAGTCCAGGCTTTGAA
gatattttggatattttggaTATGGAAACCAGCGACGAATCA Coding sequence (CDS) from alignment at sc0000094_pilon:1159377..1160468+ >XLOC_042404 ID=XLOC_042404|Name=XLOC_042404|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1734bp|location=Sequence derived from alignment at sc0000094_pilon:1159377..1160468+ (Clytia hemisphaerica_ch_hm2_pilon)
AACCACTTGAATCAGCCTAATGTGAGTGACTTCGAAACCGAACAATATCA
ATCTACACCGCAACACCAAAATTGTGTCACACAGGCGAATAGACAAAACT
ACGAAATTGGAAATGGTCAACCTTTTACAAACGCACCACTGGATAACGGA
TATCAGAATTGCATACATAACTTTGACTTTAATGGAAATGTATTTTCcaa
ccaacaagagcaacaacaacaacagcaacaacaagaCTACACTATACAGT
CAAATATGCAGCAAGATAATTACGGTACTAGTAACGAATACAACCAAATA
AACTCATTAGACCCGCAATTCATCGACCCACAATTCATTGCACAAACATT
TGGCATCAGTGGTAATGCAAATCACCAATCAAACACACAACAAAACTCAT
TCAACAATTTTAATAATCCCGATATGCAGAACTCGACTAATACTGAAAAT
TTAaactatttttcccatcaaAACCACTTGAATCAGCCTAATGTGAGTGA
CTTCGAAACCGAACAATATCAATCTACACCGCAACACCAAAATTGTGTCA
CACAGGCGAATAGACAAAACTACGAAATTGGAAATGGTCAACCTTTTACA
AACGCACCACTGGATAACGGATATCAGAATTGCATACATAACTTTGACTT
TAATGGAAATGTATTTTCcaaccaacaagagcaacaacaacaacagcaac
aacaagaCTACACTATACAGTCAAATATGCAGCAAGATAATTACGGTACT
AGTAACGAATACAACCAAATAAACTCATTAGACCCGCAATTCATCGACCC
ACAATTCATTGCACAAACATTTGGCATCAGTGGTAATGCAAATCACCAAT
CAAACACACAACAAAACTCATTCAACAATTTTAATAATCCCGATATGCAG
AACTCGACTAATACTGAAAATTTAaactatttttcccatcaaACGAGCCA
CCAGATTGATAATCCCAATATGCAGAACTCGACTAATACTGAaaattcaa
actatttttcCCAACAAACGAGCCACCAGATTGATAATACCGATATGCAG
AACTCGACTAATACTGAaaattcaaactatttttcCCAACAAACGAGCCA
CCAGATTGATAATACCGATATGCAGAACTCGACTAATACTGAAAATTTAA
ACTGTTTTTCCCATCAAACGAGCCACCAGATTGATAATCCCAATATGCAG
AACTTGCCTAATACTGAAAATTCAAACTATTCTTCCCAACAAATTATCCA
ATACAAGGATAATATCTCTTCTCAAAACTCCAGTCCAGGCTTTGAAgata
ttttggatattttggaTATGGAAACCAGCGACGAATCAACGAGCCACCAG
ATTGATAATCCCAATATGCAGAACTCGACTAATACTGAaaattcaaacta
tttttcCCAACAAACGAGCCACCAGATTGATAATACCGATATGCAGAACT
CGACTAATACTGAaaattcaaactatttttcCCAACAAACGAGCCACCAG
ATTGATAATACCGATATGCAGAACTCGACTAATACTGAAAATTTAAACTG
TTTTTCCCATCAAACGAGCCACCAGATTGATAATCCCAATATGCAGAACT
TGCCTAATACTGAAAATTCAAACTATTCTTCCCAACAAATTATCCAATAC
AAGGATAATATCTCTTCTCAAAACTCCAGTCCAGGCTTTGAAgatatttt
ggatattttggaTATGGAAACCAGCGACGAATCA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:1159377..1160468 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 571-966:697 |
| Aaloc | 100-570:1 |
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